Os03g0424600

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Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0424600| Description = Conserved hypothetical protein| Version = NM_001056933.1 GI:115453594 GeneID:4333149| Length = 3814 bp| Definition ...")
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Gene Name

Os03g0424600

Description

Conserved hypothetical protein

Version

NM_001056933.1 GI:115453594 GeneID:4333149

Length

3814 bp

Definition

Oryza sativa Japonica Group Os03g0424600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18355208..18359021

Sequence Coding Region

18355457..18355678,18356053..18356121,18356210..18356326,18356547..18357773

Expression

GEO Profiles:Os03g0424600

Genome Context

<gbrowseImage1> name=NC_008396:18355208..18359021 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18355208..18359021 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattgttttgcaagaacttccttccagctttgttgaacaccttggttttagaagattttgtgcaagcttgaacccgtactttagggtggtttctagaactactataaagggtgattgcttggctgcctatcaagaacaaaagttagctttgcttgaggtactgaggaaaacaaattctcgggtttcactgacggctgacatgtggtcatctaatcaaaacctaggttacatgtgcataacttgtcacttcattgacaatgaatggaatatgcaaaagaggatcataagattcactcaagtgcgtaccccacatgatagtatagctctcttcaatgaaattataaagtgcattcaagattggcagatagaaagtaagttgttcagtattacagtagacaatgcatctactaatgattctatggttgtggaattgaaaggaaatctcttgggtaaacttgctatgccttgcaaaggagagctatttcatttctggtgcgcagctcacatctttaatcctattgttcaagatggattgagtactatcagtgctgccatatccaggataagggaaagtgtgaagtatgtaagagcatcagaagcacgggagcaaaaatttgaagaaatcattgcacaagtcggaattgttgaagagaagcgtccttcacttgatgtctccactcgttggaattccacctatttgatgctttcctcatccttattattcaggagggcttttgattcattggatcggtttgatcctaactttaaagatgctccacaatttttcgattgggagaatgcagaagttctttgcaaacatctcaaggtcttctatgatgcaactgttgtggtttccgggacatcatatcccactgttactcgctactttcatgaattttggaaagtgaaggtgatgattctaaatgagtccaacaatgaggatgatcttgttgctagcttggtttctaaaatggatacaaaatttcagaaatattgggatctacagttcctgcagatttgggttcctgttatttttgatcccagatttaagttgaaattccttgagtttaggctgaaagcaggttttggagataaggcaactggtccaaatggatatctccctagaattaagaggacagtccgtacttggtttgctgaatattcttcacaaatttgtggtccaagcacaaccaattctcaagaagcatcaactagtggggtgaatttgcatcagagtctgcattttctactggataaagaatcattagcgactataggagtaggttggctagtggaactgtggaggcattggtttgccttcaagattggatgcgagccgatggttttggtgatccatattcaattcaaactgatacggctgagggcgatgatgttaatatgcaactattgggacattaaatcatttgacatctcaggcaaattaccatgtgagttctatgcaatctgggttctgagaaattttgctagttctggagcagtggtaagtggagcttgctttgtttcccagctcatatcagtgtttcccacacatgtcagattacatccaaaatttgtacgatgtattggaaatttagttgagcctgggatttctggacttcttttctgccgttga</cdnaseq>

Protein Sequence

<aaseq>MIVLQELPSSFVEHLGFRRFCASLNPYFRVVSRTTIKGDCLAAY QEQKLALLEVLRKTNSRVSLTADMWSSNQNLGYMCITCHFIDNEWNMQKRIIRFTQVR TPHDSIALFNEIIKCIQDWQIESKLFSITVDNASTNDSMVVELKGNLLGKLAMPCKGE LFHFWCAAHIFNPIVQDGLSTISAAISRIRESVKYVRASEAREQKFEEIIAQVGIVEE KRPSLDVSTRWNSTYLMLSSSLLFRRAFDSLDRFDPNFKDAPQFFDWENAEVLCKHLK VFYDATVVVSGTSYPTVTRYFHEFWKVKVMILNESNNEDDLVASLVSKMDTKFQKYWD LQFLQIWVPVIFDPRFKLKFLEFRLKAGFGDKATGPNGYLPRIKRTVRTWFAEYSSQI CGPSTTNSQEASTSGVNLHQSLHFLLDKESLATIGVGWLVELWRHWFAFKIGCEPMVL VIHIQFKLIRLRAMMLICNYWDIKSFDISGKLPCEFYAIWVLRNFASSGAVVSGACFV SQLISVFPTHVRLHPKFVRCIGNLVEPGISGLLFCR</aaseq>

Gene Sequence

<dnaseqindica>3344..3565#2901..2969#2696..2812#1249..2475#gcgagatcgagcctggagcggctcgccatctctgccgccggtccgccgcctcgctcgctcgctcgccgtccgccgcctcgctcgctcgctcgccgtccgccgccgccgccttgctcagttgctcgtcgtcctccgccgccgcggcgccagcacgcctcgtccttcccctctctcggctcaggtgagttcttgcctcttcattttttttcttgtttaagcactggagtcgattgggaaagaacgccgtgggtggcagatgaggcataatcaaactagcaatgcctcatcgattagtagcatgtctcgtccaatccacttccatgtttttggtttgatttctcatggatattatctcgtcgattagtagtacttactttgctttgatgttctttgacttcctgtacttctgggactgaagtgaggacaagaagaagaggccaaacatgagatttcataaccaacgaaaaaacacacacaaaatggccatctttatttggttacaatgaactatttatctctctttctcatgggttttaggacggttaatacagaaaaaatatgtgtgctatttagttatgttgtgagtttaaactcagcttgattttctgttttagattatgtccagtggagtccctacttggttttatctgggttgtgagctacagttttagcaccatgagacatgagttatgtcatagtacttagtttcagcctttcaggtgtgttttaaaattctgtccatcttgttctacatgcagtactttggttttctcccatgtcgacatcattagctgaagcttcgcaaggaggatatatcaaagaggtcattgcagagggctcttcgggaggcttatcatcatcaacacaattgttgtctgcaaaacgaaagttagcagcatcgaatccttcgacagcgaagcgaagacgatcacctattgtattgccaatagtcaggtctccaggagtgcgccaaattatttctcaaaatgctctcatcatggagagatcacaagttcctggtcatatgtccccaagtgcagagtctccaagagctagatctctgtctccagtggcaaggttcgtatcaagtccgtctactatccttgagctggatgttgaaaatcagccaagggaatcaagtcaaccaacacctcatgttgtgactcatcgttctggttagcacctaatacatttgttctaaaggactggaaatttgatcctgatgtagcacgtgcagaacttttaaggatgattgttttgcaagaacttccttccagctttgttgaacaccttggttttagaagattttgtgcaagcttgaacccgtactttagggtggtttctagaactactataaagggtgattgcttggctgcctatcaagaacaaaagttagctttgcttgaggtactgaggaaaacaaattctcgggtttcactgacggctgacatgtggtcatctaatcaaaacctaggttacatgtgcataacttgtcacttcattgacaatgaatggaatatgcaaaagaggatcataagattcactcaagtgcgtaccccacatgatagtatagctctcttcaatgaaattataaagtgcattcaagattggcagatagaaagtaagttgttcagtattacagtagacaatgcatctactaatgattctatggttgtggaattgaaaggaaatctcttgggtaaacttgctatgccttgcaaaggagagctatttcatttctggtgcgcagctcacatctttaatcctattgttcaagatggattgagtactatcagtgctgccatatccaggataagggaaagtgtgaagtatgtaagagcatcagaagcacgggagcaaaaatttgaagaaatcattgcacaagtcggaattgttgaagagaagcgtccttcacttgatgtctccactcgttggaattccacctatttgatgctttcctcatccttattattcaggagggcttttgattcattggatcggtttgatcctaactttaaagatgctccacaatttttcgattgggagaatgcagaagttctttgcaaacatctcaaggtcttctatgatgcaactgttgtggtttccgggacatcatatcccactgttactcgctactttcatgaattttggaaagtgaaggtgatgattctaaatgagtccaacaatgaggatgatcttgttgctagcttggtttctaaaatggatacaaaatttcagaaatattgggatctacagttcctgcagatttgggttcctgttatttttgatcccagatttaagttgaaattccttgagtttaggctgaaagcaggttttggagataaggcaactggtccaaatggatatctccctagaattaagaggacagtccgtacttggtttgctgaatattcttcacaaatttgtggtccaagcacaaccaattctcaagaagcatcaactagtggggtgaatgttggtggcagccaatttgctgactagaggcaatatcttcatgatcaaagcaagagtaaagtaaagactgagttaactagatatctcgaagatattcctcaagaaaatgatttccctgatgatgattttgacatactctagtggtggagggtgaactcttgcaaatatccaatatcatcacgcatggcacttgatttgcttgctgtccctgcatcctcagttgcatcagagtctgcattttctactggataaagaatcattagcgactataggagtaggttggctagtggaactgtggaggcattggtttgccttcaagattggatgcgagccgatggtatgaagcctactttagttgtgcattgctacttatattatgggccatgaacttatttatgttgaacttttgtattctgatgttttaggttttggtgatccatattcaattcaaactgatacggctgagggcgatgatgttaatatgcaactattgggtattcaaattacttgattttatatttctgtatgtctaattgaatatgggtactatgatgatctaataataatttacaatttattctacatttgcttcttaaatgagttgctagatctggaaaaagagttgtgtacacatgctgcattaccccctcaccatggtcataaaactgtaactgaaaattgtttctgttccttaaatagtactacataattttatcttcatttctaggtagtttggacctctctttttgtgggggtcagattcacttctattctgttagatagcttttaaattcaatccaagatgttctggcactggcaatgtagattatgttccaacttttaacccctttttgttgtcactgggcaggacattaaatcatttgacatctcaggcaaattaccatgtgagttctatgcaatctgggttctgagaaattttgctagttctggagcagtggtaagtggagcttgctttgtttcccagctcatatcagtgtttcccacacatgtcagattacatccaaaatttgtacgatgtattggaaatttagttgagcctgggatttctggacttcttttctgccgttgagcctgaaattcatatttgattttgcctggtgaattctgcatgagtgacaggaatagatgcaaggattaggcggctttgttgctgtcaggatatgcatgtcttttgagtccctttttttttcccctttatgctgttgttaagctatgaatattttggaaggggatttttttagaacaatttgattaaggatcggtggatttttatgccaaattgtagactctgcttttcgctgcagtcactgtctttcag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0424600, RefSeq:Os03g0424600