Os03g0425300

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Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0425300| Description = Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1)| Version = NM_0011865...")
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Gene Name

Os03g0425300

Description

Similar to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1)

Version

NM_001186551.1 GI:297722232 GeneID:9266342

Length

6277 bp

Definition

Oryza sativa Japonica Group Os03g0425300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18390780..18397056

Sequence Coding Region

18394547..18394913,18394980..18395056,18395700..18395819,18395915..18396079,18396155..18396292
,18396411..18396560

Expression

GEO Profiles:Os03g0425300

Genome Context

<gbrowseImage1> name=NC_008396:18390780..18397056 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18390780..18397056 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtgtttgagctgagttcatcacaagggccagagataggattattattgttccgaaaggtaccacatttcagaatccttgtatgtggtggagatggtactgttggttgggttcttgatgcaatagataaacaaaattatgaatcacctccgcctgttgcgattcttccagctggcactgggaatgatctttcaagagttttatcttggggaggtggtctaggtgctgttgagaagcaaggaggcctctgcacagttctacatgacatagagcatgcagcagtgaccatcttagatagatggaaggtggcaattgaagataagcgaggaaaaaatgtgcttatggtgaagtatatgaacaattatctaggtatcggttgtgatgcaaaggttgctcttgacattcataatctccgggaagaaaatcctgaaaagttctatagtcagtttttaaataaggtgctatatgcaagggaaggtgcaaagagtatgatcgatagaacttttgtggacttaccctggcaagttagattagaggttgatggaactgagattgagattccagaggattcagaaggtgttctggttgcaaacattccgagctacatgggaggggttgatttgtggaaaagcgaggatgataaccctgacaactttgacccacagtcaattcatgacaagatggttgaagtagttagcatctccggaacttggcatctggggacacttcaggttgggctttctcgggcacggaggattgctcaaggacaatcaatcaaaatacaaattttcgctccatttccagttcaagtggatggcgaaccatggacccaaaacccctgcactctcaaaatatcccatcatggacaggcttttatgttgaggagaacaattgaggagtctctcggtcatgctgctgcaatcgtcactgatgtgcttgaaaatgctgaatctagtcacctaatcactgcatctcagaagagggccctcctccaagaaatggctctgaggctttcataa</cdnaseq>

Protein Sequence

<aaseq>VFELSSSQGPEIGLLLFRKVPHFRILVCGGDGTVGWVLDAIDKQ NYESPPPVAILPAGTGNDLSRVLSWGGGLGAVEKQGGLCTVLHDIEHAAVTILDRWKV AIEDKRGKNVLMVKYMNNYLGIGCDAKVALDIHNLREENPEKFYSQFLNKVLYAREGA KSMIDRTFVDLPWQVRLEVDGTEIEIPEDSEGVLVANIPSYMGGVDLWKSEDDNPDNF DPQSIHDKMVEVVSISGTWHLGTLQVGLSRARRIAQGQSIKIQIFAPFPVQVDGEPWT QNPCTLKISHHGQAFMLRRTIEESLGHAAAIVTDVLENAESSHLITASQKRALLQEMA LRLS</aaseq>

Gene Sequence

<dnaseqindica>3768..4134#4201..4277#4921..5040#5136..5300#5376..5513#5632..5781#gcttcccctttccttctttttgcagagcaagaaatcaaccaagcaaccagccatggacatggaggagtgaggaatcggtggcctttgattggggaaaactactgccggttcatggcgtaagtccacaccaacgccgcatatttctctctctgttcatgtctctctgtcttttttttggttggtttggtgacgttttggaggaaaagaacgggaggctaattctctgcagaaatcaattcgatttctttctgcttctctgtgctttttatttcagtttcccccctctgtttctttcttctacactgccgaaaaattaggctttgctctactaaaaactaatctggaatggaattttttggcctggtttcgtgttgcttcttcgggggctaaatactgccttttgttctaggcaaagcctgccaaatatctttctggttccttttcacttgtggaggttgctgcagcctgcagctttatttggagtacttaatttcatcgaaggctctatgtgccaattttttttcctgatttcttgcgtttcttgttttatataagcatttagttactccgctattgatgcactatcgactatttagttctgattagtgaatagtgagtggggaataactcagtatctctgagataattctgcacctttattgcctaaccttatgtagtctgaaatctgaatagtactagagaggatttttatggtacaatatactgctagtatatactgcaagtatatatgatctaacggtgtagattgatttaattttttatttaattagattgcagtataaagtttgaaagggtaattttgtcttttcttcgttattctatcatcaaatcgtgctatcgtcacgtgctttgtcatcaaatggctctcaggatgctcctcccctagtgcacgataagatccaggactaggtactctcaattaaattcaatttgaaccaaaaattactaaagtgttgttttattttctatcaaattcctaatatgcccttttatatactgccagtatatactggtagtatattgtaccgtaaaagttctctagtactaaggccctgtttagttcctatttcaccctatcacatccacatcgaacgtttgtgagtattaaatataggcttaaaaaataactaattgcacagattgcgactaatttgcgagacgaatcttttaagcctaatagctccatgatttgacaatgtggtgctacagtaaacatttactaatggcggattaattaggcttaataaatccgtctcgtggtttactgacggattctgtaattagtttttttattagtgccctaacaccccatatgacaccctatataatacccgatgtgacacgccaaaactttacactcctggatctaaacaccccctaaggtgttgttaagatgtcttgctttatgctttgtttgcaacttgtgtttgccatgaagatcgaaacatttaagtattaaattattcttaagaatgcagcaactcggtatatcatctgtgacttgagaatgcagttgtgaatcagtactcttcctactaacataatctcttatattatggatagtaatcccaatctacatgttattgtactttgatgagatgcgcatgttagtgcttcagaaatgcaatcactcattgctaaagagcattctgtacttttgtccagcatgatcagtacaatcacttgatcatattagttacatctacatgcctttttgtttattcatatatcttctgattgcaaatcatatttatacagcttattcagctttgcagagctataataaaaacagtgtgattattaagaggatataggttattgttatgatgtcctcatttcaaggttataatttcttggaaccatcaacttcaatgattgtctggtggagagatcaatttagaaaacttatgttcaattggcacagtaaaacccttaatctgtcagaactctggatcccaattgtggtttgtttcaccattggtatagttggtcttttgacagttttgtaccttttctcactatggagacgaaagatcagtttgagctggatgaaaatgatagcaagatcaaaaaggaagaattttgaaagaacccacaaggttccaactgctgaacatgtttggagtgtagaatctttacttcgtgcaaaaggactgaagtgctgtgtgtgtttagaatctatttcacctgctcagccccttgggcaaatgacaacatctgagaatatggttcaccggtgtgatgtctgcggtgcagctgcacacatgatctgttcttcaaattctcagaaggactgcaaatgtgtttcaatgtttggatcaaaacatgttgtccatcaatggaccgtactctggacagatatagctgatcagtctgaagaagctcaatactgtagttactgtgaggagccatgcagtggatcttttcttggaggccctcctatatactgctgcatgtggtgccaacggttggtgcatgttgattgccactcaagcatggctacagagacaggtgatatttgtgatctcggtccattcaaacgccttattctttcgcctctttttgtgaaaaccaggagcaagcctggtggaattttaagttccataacacatggtgcaaatgaatttgcatccactgtgagggggcatctcaggaaccgaagcaagaagcagaaggaacatagcagggtaccttctgactgtaatgttggtgacagtaatgatgattcatcatgtgataccgcagcaaatgctaatcagagggctaaggacttgaaatcatctggggacaatgttcagaggagtgctgagaatgagcatgatagcagcgagagtgattgtaaagaagttataccagagcctagaagattacaccatgatgatgctgaaggagctaaacttaagtacatactggatgacttgcctgctgatgccagaccccttctagtgttcatcaacaaaagaagtggggctcaacgtggagattctctaaagcaccgcctacattttcttttgaatccagttcaggtcatgatacttctcgcactagcacctttattagtgaaatgtacatcaaatatatattgcatactttagtatgagcaaatctttagtatttattgaatatactgaatgcatcgctgtttttcctgtattcactcatctcatccatgctgtgtagaatcacctcagattatataaccttcatgttgctagcaactgccttgttaagctggatccctcagtaatcctagattgttgggccttggttgatttcattagcatggcatattggcctaacaacgtgggagtaaaactcagaaaatatgttccttgggataagctgcttttccaaccatatccacaagatgaacacaaagcaaaaccttgattgcctgtctgatgttgttggcccaagtatcggaactcatataccaaacaaatgtcttaagcagaccacattctctggtagttagtactacctccgtttcaggttataagactttctagcatacgtgtctagattctttaacagatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggtagtatctttcttttgcatcatctatggacagtcctgccctgtcttagtgattagtttgtctgttctggataacaattcaagattgatctgttctatgagcactgtaccttaacagtgttgctaagatatttgtgattcactgattggctacattcgttttttaggtgtttgagctgagttcatcacaagggccagagataggattattattgttccgaaaggtaccacatttcagaatccttgtatgtggtggagatggtactgttggttgggttcttgatgcaatagataaacaaaattatgaatcacctccgcctgttgcgattcttccagctggcactgggaatgatctttcaagagttttatcttggggaggtggtctaggtgctgttgagaagcaaggaggcctctgcacagttctacatgacatagagcatgcagcagtgaccatcttagatagatggaaggtggcaattgaagataagcgaggaaaaaatgtgcttatggtgaagtatatgaacaattatctaggtaggtgtgtaggtttagttctatcaatgcactttatccaaaatccttatttgaccattgtcacaggtatcggttgtgatgcaaaggttgctcttgacattcataatctccgggaagaaaatcctgaaaagttctatagtcaggtagtgtctattcaagtttactcgtatgaatctttatatatgaaagatattgcactgctcattttcaaattttaaggacaactaagaaacaaatgaacaagagtgaactcaaaaaacagaaggtgttgattttggttgatgatgagtgtataatcttaatccaaatttgttacatcagcaaattaaacgttgtgtttacaacaagtaaccagttgctaattaggtatgtatgttctgtttgggatattggtatacttggtcctgttaccagttaatgtattcttatatattcatgaggtgctttaaatattactaacctaatcagttagatagctcaacagttcatagccaatatctactccatgttttatgacacgatcatttacagtctgcatgtcgtgatctccgcttacagtatggttgttagatgctttcagaaattttgtttgcaatagaagtttctttggcttgtcctttttatcattgcttgctctacaggttatttttgagtacttgatatgtatgcttagcagactgatacatgaccaacaaaaatctcattgctgtatcaaccgtgttgtttttcagttcttattgcgagatttatcctactttgtttcttactttatttttttctgctcagtttttaaataaggtgctatatgcaagggaaggtgcaaagagtatgatcgatagaacttttgtggacttaccctggcaagttagattagaggttgatggaactgagattgagattccagaggttacataagatgatcttgagacttgtacataaaaccaccatctatactatatggcatgcccatgctaaattgctaatacgtatgaatgcttcaggattcagaaggtgttctggttgcaaacattccgagctacatgggaggggttgatttgtggaaaagcgaggatgataaccctgacaactttgacccacagtcaattcatgacaagatggttgaagtagttagcatctccggaacttggcatctggggacacttcaggtaaacaagcacattcaacaattaatctttgatctgatgaatgaagatgatgctagataaactgaactaatttaggttgggctttctcgggcacggaggattgctcaaggacaatcaatcaaaatacaaattttcgctccatttccagttcaagtggatggcgaaccatggacccaaaacccctgcactctcaaaatatcccatcatggacaggtttagttcgttcttgttgtgcgtttggtctcatgtaatctgtattttggggccatggttactagcacactggttttaactctcaacttccgtactcgggatttttcatgtatttcaggcttttatgttgaggagaacaattgaggagtctctcggtcatgctgctgcaatcgtcactgatgtgcttgaaaatgctgaatctagtcacctaatcactgcatctcagaagagggccctcctccaagaaatggctctgaggctttcataaacccactcttgaaaacggtcgcgaaggtactcaatctgcgttgcaagtgatcatgcagttcgaagctgagttgtcgatacttcaacaccagtctagacaagaatgtcctaaagcaaatttcaggcagggagaggctctgcctgcctggtgtccacgtctctcttcaccaagtatatatccacttgtttgtggtggatggaacctaggaaacatgggttcattgcacacgttgcacatatttttgattggaatttcactgtatgcaccacctcagggtaacagttggtaagctttttttttttgagctgaacagttgggaaatgggtaatgttgtgttgaactgttgttgtgcaagttttctgtctaccttgttggtcggtctttctgtctggaagctctctgtcgagcgctctggtatcggggcatgttgtatataaagtggctactcagattgatcttattttcaaccataccatttttttttggtaaagttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0425300, RefSeq:Os03g0425300