Os03g0430000

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Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0430000| Description = Conserved hypothetical protein| Version = NM_001056957.1 GI:115453642 GeneID:4333173| Length = 4514 bp| Definition ...")
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Gene Name

Os03g0430000

Description

Conserved hypothetical protein

Version

NM_001056957.1 GI:115453642 GeneID:4333173

Length

4514 bp

Definition

Oryza sativa Japonica Group Os03g0430000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18652106..18656619

Sequence Coding Region

18652219..18652321,18652400..18652613,18652710..18652870,18652981..18653126,18654218..18654280
,18654369..18654461,18654906..18655067,18655168..18655274,18655885..18656021
,18656110..18656378

Expression

GEO Profiles:Os03g0430000

Genome Context

<gbrowseImage1> name=NC_008396:18652106..18656619 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:18652106..18656619 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaccactccaccgccgcctcgttctctgcttcctcatcctcgccgccgccgccgccgctaccaccgctgcctccatctccacccccgccgagctcgcggtcgcgtcgcaccctctgtcccccctccgtctcccgccggccgcgcccttcgccggcggcggggagggcggcggcggtggcggtggccccttctgcacacgcgtgcatatccgcggtcgcccgtcccgcctccgcgacccgtcgcgcttcttccacgccctcagggtccgcgccaacgctacccgccccagcggacttgagctctgctttcaccggaatgccacagtgggtccatgcaagtgcgcggcgtcacagtgccataagatggccaagagcggcctatgggtgcaagccatctccccgtacgacacccgggtcctcgatttccggatgccatcggacccttcgaggtctatcatagtgtcgacggaggaagagttcttgcttcacagggtggtgttcttgttgctgggaatggtgctgatggcagtggcgcacactcttagcgagtctgtggtattctactatggcggagcaatgacgattggaattttccttgtaattctgattatactcttccagggaatgaagcttttacccactggtagaaagagttctcttgcaatttttgtgtactcttcacttgttggcatgaccacatattttttgcactatttgtcgggacttttacgttctgtgcttgtggaaattgggattgccgaagacatgcataatcctctaggtgtattccttctcgtaagtgtgatcttagctggagcctggtttggttactggggtgtccgtaagcttgtgctaacagaagaaggatctgttgatgctggtgtggcttattttgttgagtgggctatcttgattatttctgcagttatgatcctgcagagttctttggactatctctttgcattttcagcattattattttgcacagccatcaaagcagtttctaggattgagggaaagtcaagagttctacggtgcctatcaagggcattttcgaacattgttcccactggctatgaaggttttggtgaggagtactccagcatgaatggatctcaccaagatggatttagcaagcttcatggtgaatacatgaggagtacaccaaaaagaaattcacttcgatcaaggaagacattgtctcaagaccttgctacggatagctactattctaccttccacactaaccctgagcggaaaaagttttcagaggaggaatatgcagcattcactagagaagagacacataaagctatgaaacaactggtctcatcgcctgatttcaacaggtgggcactagcaaacgtggacaggatatctgtgactcctccacaaagaacaccccaaaatagcatgagccagcagcggaaacgtttgttcggactgttttaa</cdnaseq>

Protein Sequence

<aaseq>MPPLHRRLVLCFLILAAAAAATTAASISTPAELAVASHPLSPLR LPPAAPFAGGGEGGGGGGGPFCTRVHIRGRPSRLRDPSRFFHALRVRANATRPSGLEL CFHRNATVGPCKCAASQCHKMAKSGLWVQAISPYDTRVLDFRMPSDPSRSIIVSTEEE FLLHRVVFLLLGMVLMAVAHTLSESVVFYYGGAMTIGIFLVILIILFQGMKLLPTGRK SSLAIFVYSSLVGMTTYFLHYLSGLLRSVLVEIGIAEDMHNPLGVFLLVSVILAGAWF GYWGVRKLVLTEEGSVDAGVAYFVEWAILIISAVMILQSSLDYLFAFSALLFCTAIKA VSRIEGKSRVLRCLSRAFSNIVPTGYEGFGEEYSSMNGSHQDGFSKLHGEYMRSTPKR NSLRSRKTLSQDLATDSYYSTFHTNPERKKFSEEEYAAFTREETHKAMKQLVSSPDFN RWALANVDRISVTPPQRTPQNSMSQQRKRLFGLF</aaseq>

Gene Sequence

<dnaseqindica>114..216#295..508#605..765#876..1021#2113..2175#2264..2356#2801..2962#3063..3169#3780..3916#4005..4273#gttgtttcaaagctaaaccaccctttccctcctcctcctcctcctccctccctcccccgtcttctcctaccatcgccccgaaacaaatccccaatccctcaatcgccgccgcgatgccaccactccaccgccgcctcgttctctgcttcctcatcctcgccgccgccgccgccgctaccaccgctgcctccatctccacccccgccgagctcgcgggtaagtatttactttctcccctcccaaaccccaccaaaccctaaccctaactgttttttaacatccttctcctcgcagtcgcgtcgcaccctctgtcccccctccgtctcccgccggccgcgcccttcgccggcggcggggagggcggcggcggtggcggtggccccttctgcacacgcgtgcatatccgcggtcgcccgtcccgcctccgcgacccgtcgcgcttcttccacgccctcagggtccgcgccaacgctacccgccccagcggacttgagctctgctttcaccggtaagtgggaatgcggacataaaccctagcgcttccttgctatgtctgcgcgtttcgcctgatttttcttttggttggcccggctggtgtttgtaggaatgccacagtgggtccatgcaagtgcgcggcgtcacagtgccataagatggccaagagcggcctatgggtgcaagccatctccccgtacgacacccgggtcctcgatttccggatgccatcggacccttcgaggtctatcatagtgtcgacggaggaaggtactgttttctttctccttgtttcagtagttgtgttctgtttgctggcatcgtttgcgtgtatattgatgtgggagtgctttgggggctttctgtggttgtgtttgcagagttcttgcttcacagggtggtgttcttgttgctgggaatggtgctgatggcagtggcgcacactcttagcgagtctgtggtattctactatggcggagcaatgacgattggaattttccttgtaattctgattatactcttccaggtgagtttacccatcttcactaagttctatatatatggcaattgatattgtttgaagttttgtatggtgggtgttgccatcattgtaatagtttgggaagttatatttacatcatgcttagcattgacagttagaagaattattggcataggcgggtggcatatatggaattaccaaagttattttctcatctggacaacataatttaaactgtaaactttctttactagagggttttctctgttacctttgtttcaattagtaatatcacgttttgttatcatgtttaaactgtaaactccacgcaacgacattccactattcctatttcatcttatcatgtttatcaaagtaatctgcattcccacgttttctattctggtgtataatttaaaaatattattctgttacatttgtttccagttaccaacactgcattggtgattaataaagctctaactgattagatacctgttatcatgcttagcaagtcatattctgtaaaaaggaatcaagaattgagaatttaggtgtttgttatgttttgctggcaattttgtcttgtatgtaaaacatgccatttcattcagtgcttcagcttaatggacactcgccctccttttctgatgtgcttataataaaatgtgtgtttccattttttttccctcgtgttctgttaggcgagaaagtctcctgcttctatattggaacccttttccaaattcactttggtgatcctaagcttttaccatggaaaggaagggtcgtgggatgtaaacaaagaaatggggcaaaacactaacataataagaaagaaaatgatcgagacaaataacctcatagtgtttgcatttttaacagttttttattgatgacttatccttctcctttttatcaatgagcataagttgattcttatgaaccaatctgtctagcttattgaattttcagtaccaaatgcttaaactgaggtacgattgtctgtagtccctccaagtattttatgtgacaaccagttaccttaggagtgtttttttagttcttttcttagcttactgtctgattttttctatttttatcttctttttcagggaatgaagcttttacccactggtagaaagagttctcttgcaatttttgtgtactcttcacttgtgagtattcatacaatttgacttgtttctgctttgattgcaatgccatatccttggaacactgattcatgacgttttctcaaaacaggttggcatgaccacatattttttgcactatttgtcgggacttttacgttctgtgcttgtggaaattgggattgccgaagacatgcataatcctgtatgtaagttctccttgtaggttacttatggttcatttgctacttctgtttccaccttcaattacatgtgccatatggaagaaagagctttaccttttatggaggtacaagtgtataatattttcaactttgcagtttgctgcttgtgttttgtaagttcgttttcatagattactgtgatgtataaatttgataatatctcatattctcttcaaatatttacttatgcttgtctctgccagttcttgttgataaatagtctggttataatagtcccataaagagatagtccatgatttatcattagtattcccttcaagtttatatgctgctgtcaaattatcccataaatatattgctaatgctttcaaaagcatcattcgttcaaggtccattttctcttttccctgtgacataccaacatccaatatatgttattgcagctaggtgtattccttctcgtaagtgtgatcttagctggagcctggtttggttactggggtgtccgtaagcttgtgctaacagaagaaggatctgttgatgctggtgtggcttattttgttgagtgggctatcttgattatttctgcagttatgatcctgcaggtaagttgttatagtgacctgttatttactgacaatcctaataatttgcttatctgttaactgacatacaagcttttgcttgttctttttttccgtgtagagttctttggactatctctttgcattttcagcattattattttgcacagccatcaaagcagtttctaggattgagggaaagtcaagagttctacggtgcctatcaaggtaagatgcaatatattcgtatatcttattatcagggaagtcacctcatactttcgcattgatcataacccttgtcaattgtcatcaaggagaatttgacttgattgtaactatgtaagagcagggttcctcatattctattgtttatggttgggttcctaacttttatagatttagccagtgcactttgttatttgtatctgctgattattcttggccagtgcacacacagctaagtccaatagatgttttctcctatgtgtgtagtatgttgtgcaacatcagagtaattactttagatgtgaatagaaagtggaacactgacaggaattgggtatgctgggaaataattcatgtcttagtccttgtatctttctaaatgtattatcttgtagatgtgatggtgaatgtatgcaactttgtcaaaaaccttttggttacatttataacactatgtttcgtagagatgacgctgaataatgtctttgtggataatagtttctccaaatgaatgggtccctttgccttaagaatgcatttcattttgttaccaccaaatcttttgataacatggttaacacatcaatgacctgattgtatctcttggcagggcattttcgaacattgttcccactggctatgaaggttttggtgaggagtactccagcatgaatggatctcaccaagatggatttagcaagcttcatggtgaatacatgaggagtacaccaaaaagaaattcacttcgtacgggtttgtcatttcttttacctgtatgatgtcatagttcggtattattgtttggtgaatgacctaaaatcttttgcttttacaggatcaaggaagacattgtctcaagaccttgctacggatagctactattctaccttccacactaaccctgagcggaaaaagttttcagaggaggaatatgcagcattcactagagaagagacacataaagctatgaaacaactggtctcatcgcctgatttcaacaggtgggcactagcaaacgtggacaggatatctgtgactcctccacaaagaacaccccaaaatagcatgagccagcagcggaaacgtttgttcggactgttttaagctgtgtgtgatatcttccatctagtaatctggtttcaattgccaatcaatagatttgagctgtatatcagtttttcttcctggtagtggtatcttcagtgtgcttgcagcggtaggtattcaatgtatatgaattgagtggtagctagcagctgtaacaatggtgtatttgcttgtggaagcgaatctgtagtagctgtaacgatggcgtatttacttttgtggaagcaaattttgtagg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0430000, RefSeq:Os03g0430000