Os03g0439200

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Revision as of 12:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0439200| Description = Conserved hypothetical protein| Version = NM_001186561.1 GI:297722252 GeneID:9270034| Length = 5841 bp| Definition ...")
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Gene Name

Os03g0439200

Description

Conserved hypothetical protein

Version

NM_001186561.1 GI:297722252 GeneID:9270034

Length

5841 bp

Definition

Oryza sativa Japonica Group Os03g0439200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19186088..19191928

Sequence Coding Region

19186088..19186756,19187256..19187447,19191710..19191928

Expression

GEO Profiles:Os03g0439200

Genome Context

<gbrowseImage1> name=NC_008396:19186088..19191928 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:19186088..19191928 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggagagaagaccaaggacaacaagtccaagagtatgttcaaaggggaagaagactaaggagaatctcaagaagatgtttgatcaagtctatatcgcttttgagccattgagcgatgtagatggtgagaatgaagatgaagataaaggaaagaacatcactggtgtctgcttcatggcatgtgatgaatcggattcagagtgtgaagacaatgatgctttggtggcgaggaaggagaacgtgtggatcgtggattctggttgttcgcggcacatggattccggttgttcgcggcacatgaccggtgataaaaattggttctccttcctcaaacaggcatccaagactgaatcgattatctttggtgatgcttctactagtgccattcttgctatagatttggttaagggtgattactacttgttaatcataagtggggcccacatctctctcctctccttcttcttcgtcatgcacgcgcggagtggaggaatggcgcacggccggcgtgacggcccgagccgtccggctcggcgttgtccggcggaaaaagcagaggccgcgtcgccgtgtctcggtcagggccatcttgttgaaggcggctccgtcaccagtgactatagaagcgtcgccagcgccgacttcgagggcttcaccgacctaggcacttcgctcctcgcgaggcccgccgtcgtgttcgacgacatcgctgccgccgccgcctccgtcgccgtcgcggaggttgccaagccgagggccgtggggcccacagcgaggagtgtgttcgccatggactgcgttccgctctgggggctggagtccatttgcggccgctgcccggagatagaggacgactatgtcgtggtcctctgtggatggttgccggcgacgcggcagtcgatggcctcgattggaacacaagccaacagcaactcgagtgcagaggctaacaacaacccaacagcaactcgagcgcaaaagcggccgtcgccggagcgcccccgcacgccgagccatcacggctcaggccgtcacgctgttcctcctctccaccgcgtgcgtgaggaagaaggatag</cdnaseq>

Protein Sequence

<aaseq>MVERRPRTTSPRVCSKGKKTKENLKKMFDQVYIAFEPLSDVDGE NEDEDKGKNITGVCFMACDESDSECEDNDALVARKENVWIVDSGCSRHMDSGCSRHMT GDKNWFSFLKQASKTESIIFGDASTSAILAIDLVKGDYYLLIISGAHISLLSFFFVMH ARSGGMAHGRRDGPSRPARRCPAEKAEAASPCLGQGHLVEGGSVTSDYRSVASADFEG FTDLGTSLLARPAVVFDDIAAAAASVAVAEVAKPRAVGPTARSVFAMDCVPLWGLESI CGRCPEIEDDYVVVLCGWLPATRQSMASIGTQANSNSSAEANNNPTATRAQKRPSPER PRTPSHHGSGRHAVPPLHRVREEEG</aaseq>

Gene Sequence

<dnaseqindica>5173..5841#4482..4673#1..219#atggtggagagaagaccaaggacaacaagtccaagagtatgttcaaaggggaagaagactaaggagaatctcaagaagatgtttgatcaagtctatatcgcttttgagccattgagcgatgtagatggtgagaatgaagatgaagataaaggaaagaacatcactggtgtctgcttcatggcatgtgatgaatcggattcagagtgtgaagacaatgatgtgagttcttttgaggaagctattcttactttaagtgcaaaaaataagaagtgtgagaagatgtatagaaaacaagaatttattattgaatctcttaattctgaaattgatatattaaaatctcttattcctaatgatgatgattgcaaaaattgtgaggttttaatgcatgaaatttcaaaaattagagatatcaatgttgcacatgatttcaaaaatagatattctctagctctttgatttgtcttgcacacacgcactttggatgagttgtttttagataaaaacttgttgaaaaaaaaatcaaattgcttttcatgctagtttgatgtttaacatgatttgtgctaaaaagttaaaacaatagcatttgtgttttggattgctcaacatgcacactaaacaagatgaagctaaaagatgctttaggtcgtgctgagtaaatggaggaaattgtgaaaactaatgaagtgctttcttgccctaaatgtcgtaagagcaaaggtgtcatggtagattgtgaaaattgtgctaatttagaaaaagaggtttcttatttgaaaagttctttgcaaagattttctgatggtaagaaacaacttaacatgattttggatcaatctaaagtgactagctacaatagaggtgttggttttgatgttcatgactatttcaccaaaaatcaacctaatgttttgagtgtgactgaacatggtgaaattttgacaaaatcaagtgctaagataaaaatttttaattctgctggaaatatgccctctgtttctgcaacactaaaagaaacaaaagcaaagctttcaagaccatctgcttctaaagaaaagtatacttgttctttttgtggtaaagatggacatcttgttggtttttgttgcagttagctcgtaaacagaaaaaggagagagaaattgcttttacaaaattaaagtggcaaaaatccggtgttccctcgaggaaaccggtcagaccgcagtgggttgactagcgaccggtcagaccggtagtagtgcctcggtcagaccggacaccggtcagaccggcggttcataagcggtcagaccggcccccggtcaaaccggctactgtactttggtcagaccggcctcggagtgatttttctaaaaattctcaaactatttttgcacgtgcatatatgtcacgccctgaagtccttctctctaaccaaaaattcaattaataaattgttgcaagaaattatttgtttaaaggcaagagagaaaccctaaattaataaatgcaaataataatcggaatcggcatgtggaatttttcttgagttccccattctctaatatattaacaagatttttagtggaattttcagagcattggaaataattttaaccaattaaaataagcaaagtgcaatatttaatccctgggaaaatcctttttcccttttctcttttctttttcctcctttttccttttcttgggccaccggcccatttcttcccgtgccggcctgctcttccctcccactcccgaagttcacccggcctccctctccctctcgggcgttggcaggtggggcccacatgctagccctttcccccacctccagtcgccggcgccccacctccccacgtcacgccgcaaccgccgctccacctcgcactcccatgccgcctgtcttcctcgcgcacccgtccccacgtcaccgccctccccgccgttccccccccggtgtgcgcgcccgcaaatgggtgggatttgatttgaatccttccccctctctcttcctctactcccccatgtcgccggccaaataggggccattcccggccacgtccgcctctccctcgcccataaaaacactcgcccgacactcctctcccttttcccctttttaccgcgctcccgcacgctctctaccgccgccgtgccgctccctgctggcgccgccgcttgccaccacctccggccgcgcgccgccgccgctagagccgccgccgcaccaagccgccaccgccgccaaagctaccccggccgccacttccctatccaatcccgccgccggaacgcctctctccccgtgcgccgttgagtttcgccgcccttcccttctccggccggccacggtagccgccatgggtttcctcccaacccctaacccctatcctctctctcctagggtgccgccgccgcccatccaacccttcgcgtcgctggtcgtcgtcaccacctttgccttccgctccggccgccatacccgccggtgaggttcccctctcctccctctttccttttctcccgtgtgtgccgccgttctccgcgcgtgcgccgccgtcgccttcgaccgacgccaccgccttccacgccgtctgccgccgcctcctgctgccggttgccgttgccggcaaccgcgcgccgccgccgctcaccatggctggccggccgacttgaggccgagccgagccaggccggcgccttcctcctcccctttgagccaccgcctggtggggcccacccgccaggccacctcctcctcctcttgtgtcactgacccgtgggtcccgcctatcggcgcccccctggatgatgtcagcagggatgatttattgcgcaataaataattaaggtttttctgtttatagtaaaaatacagagaaacttttaaaaaccataactaattcatccgagctccgatttgcttatagcatgttttataacatgtagtcttatagcatgttttgcttgtatgctttgtttgtcgcgtagatttcgggcgttccagcgatacgcggttcctcgaagacgttgctgtggtctcatcagcacgagagcaaggcaagtcatgcattacaattgatcatgttgtacccaatttacaaatgtcccgcatttctattaaatgttgcattattttacagtatatcatgtgggatgggtcctattactcagccatagattgtttaccttatgccattgataacttgggtatcaaaatgactagatgttggcttaggaaatgcttagccatgcttagttcaactagtacacaaagggggatcatattaaagcatagactttgattatgggcatagctttggattagtgccaccgcaatggtgttgattaattaaaatacactacatggtgggctgtgggtgcatggttttgctagtcgtgcccatggcgattaaggaccggttcacaagatgccttggaagaacttatcgtacttaccacaagccagcgtgggcaacggctgggcttgtagtgtagctttcctctagccgacgtacccaggcaagggtgggcgtgatggagttgggtcggccggggtgtccggttgatcggcttccggattcaccgtggcacgagaggggactgcccgctgccttgcgaggagtgggggtgaaacctgaggtgtggtgcgattggttagagggggttatgcgaagggtcctgtcacggcctctttctagtatgtcgtggtggcatgccggcgcacgggaacgtgtcatggggctgtgtcttgtgggtacagttgtacacctctgatcagagtaaaactattcgaatagccgtgcccgcggttataggcggtcgaccagattcaccgtgattagtctcaccttagttagctaatggaactggttagttcaggtggtggtttgggcctgtctcaacgtggtgtagcgttgagcagtgattggttaatatggattaattactagcactattttactgctttcaactactatttttaaatgcctgctttatgcaaatgaacctttagcctcctttggttatatcttgcatcataccttctcttccagtatgacttgctgagtacagtggatagtactcagtcttgctctcttttcccccacaccagagctgaagattttcctagttggagttgtcttgttgaagttggtttcgtcgctgccgtcaaggatgcctgtggaatggagtcgcctcgctgcaggagtcaagtctttaggcttagctcgcttttatcttttccgctgcatttgtaatcttttatatctttataagacgtgaatctatatgtcaataattgtcatttgtataccctggctggtcctagacagaggtttaatgcacattcagcttagaaattctggttcatgaatttctgggcgtgacaatatatgcctattggatctactggttgtgtgtctcagtactggattcctaaatttcgtttatctaaccccagtactgaagcttcgacatcttcttgtgtgtaggctttggtggcgaggaaggagaacgtgtggatcgtggattctggttgttcgcggcacatggattccggttgttcgcggcacatgaccggtgataaaaattggttctccttcctcaaacaggcatccaagactgaatcgattatctttggtgatgcttctactagtgccattcttgctatagatttggttaaggtaaatgacaagtttgaattgaaaaatgtagctttggttaaggacttaaagtataatttgctttcagttttacaaatgtagatgaaaattttgttgttcactttaagaaaactggaagtaaagtatttgattcttgtggtgattctgtgctgaatatttctcgctatgaaagagtgtttaaaattgattttgaaaaggcaaaatgtgccacaggacatgcaaaaaacgtgtaattggcttagagacaccgcaaaaacatgacatggctgatggacactaaaaaacgtgcaattggctgtaggacaccggttgcattattttattattttcgggtcaaaagaggtgagatatctaaatgcctggattgccccttctctttccttctttaaacaccggtgggtcccacgtgtcatggaaagtgtatgtttaatacaatttttaataggtttttaaccacctggccccacgcgtcatggcctaatttgttcctaattagtagggtgattactacttgttaatcataagtggggcccacatctctctcctctccttcttcttcgtcatgcacgcgcggagtggaggaatggcgcacggccggcgtgacggcccgagccgtccggctcggcgttgtccggcggaaaaagcagaggccgcgtcgccgtgtctcggtcagggccatcttgttgaaggcggctccgtcaccagtgactatagaagcgtcgccagcgccgacttcgagggcttcaccgacctaggcacttcgctcctcgcgaggcccgccgtcgtgttcgacgacatcgctgccgccgccgcctccgtcgccgtcgcggaggttgccaagccgagggccgtggggcccacagcgaggagtgtgttcgccatggactgcgttccgctctgggggctggagtccatttgcggccgctgcccggagatagaggacgactatgtcgtggtcctctgtggatggttgccggcgacgcggcagtcgatggcctcgattggaacacaagccaacagcaactcgagtgcagaggctaacaacaacccaacagcaactcgagcgcaaaagcggccgtcgccggagcgcccccgcacgccgagccatcacggctcaggccgtcacgctgttcctcctctccaccgcgtgcgtgaggaagaaggatag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0439200, RefSeq:Os03g0439200