Os03g0561249

From RiceWiki
Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0561249| Description = Conserved hypothetical protein| Version = NM_001186567.1 GI:297722264 GeneID:9267081| Length = 4151 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0561249

Description

Conserved hypothetical protein

Version

NM_001186567.1 GI:297722264 GeneID:9267081

Length

4151 bp

Definition

Oryza sativa Japonica Group Os03g0561249, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:20871721..20875871

Sequence Coding Region

20875270..20875334,20875416..20875707

Expression

GEO Profiles:Os03g0561249

Genome Context

<gbrowseImage1> name=NC_008396:20871721..20875871 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:20871721..20875871 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgaatatttctccttttgatttcatcctctctggggcagccaatcgacgggaacgttgccgtgcacaccggagctctggagcgcgctctgcacaccgccgcagcgacatcgtcgccgttgccaccaatctagatcaagccggagcgagccaccacgccaccagcttcacctcaacctcctctccatttaccctcaagaaacccatccaatggcgcagcgatcttggaggtcgacatcgtcttttccaactccgttcaaccgcttccatcattgattccattctctctgatcgagcagccgacgtcatccctggagttgtgccatgccgccatggagcttcgccgtcgctgtga</cdnaseq>

Protein Sequence

<aaseq>MPNISPFDFILSGAANRRERCRAHRSSGARSAHRRSDIVAVATN LDQAGASHHATSFTSTSSPFTLKKPIQWRSDLGGRHRLFQLRSTASIIDSILSDRAAD VIPGVVPCRHGASPSL</aaseq>

Gene Sequence

<dnaseqindica>538..602#165..456#gtcgccactcttcacccaccattccagtgccaatccatccgagggagagcatcctcgctgcccttcactgtttctccatcgccggccgcgaagaagacgatggccggaatcgttgatgagccgcagtcgtttcctctactcttgcgttccatactctcctcaccatgccgaatatttctccttttgatttcatcctctctggggcagccaatcgacgggaacgttgccgtgcacaccggagctctggagcgcgctctgcacaccgccgcagcgacatcgtcgccgttgccaccaatctagatcaagccggagcgagccaccacgccaccagcttcacctcaacctcctctccatttaccctcaagaaacccatccaatggcgcagcgatcttggaggtcgacatcgtcttttccaactccgttcaaccgcttccatcattgattccattctctctggtgagcgtcagtcaaattccatgcatgcatggcctctctagatagcctttgacctcttgcatgcaccgtattggtttacagatcgagcagccgacgtcatccctggagttgtgccatgccgccatggagcttcgccgtcgctgtgactctgcagacatccccagccttgtctagcatctcggtgagcacccagcagcctatagaacatacatgcatgcacccaattaaccaatacatgattgtagaagcacatgcaccaccacccgaaaacatcctctactcggactcgccgctggcgctactccgaagtcccctaaccaagaaaactagaggaatggaatcgcaagaacatgatcttcattttatattttaaccgcaactccaaccgagccaccaatcaccgccggtgaacccgggatcgagctcagccatggctgctctgcctctgtgcgtgtgaaaaaggagtcagggacttcattttgagaatttaaacaactataaggttcattacgtaatgttcccaatcaatgatatatggacctaggactgcgggttgatttcctgaaaccctaggggcctttttgcatattggcatgataccgacaggtggaccccatgagtttaaaaatctgaaaatgtaaaaagataatactaaaagctttatattttcaacaggaaaacatgtaaacttataaaatccataacatattgaaaacaactcattttagagaaatcaaatttctgtgaactcaccaaatcatgaactttagagttattgcataaaactagacattcactgttcaaactttgtctctaaaattggtctaagataaatcatacataaagcatacacaaatttataaaatgcatataaaattcatctcaactcattttagagcaaactcagtttctatagatccatcaacttatgttttcctataaagtaaaatgaaatagtatacatactttagatcaaatgcctctgaaactattatctttaaaatgactagttttatgtaagctgaactttagaaattcacataaaattcatcttagatcatttttgagtaaacccaagttctgtagaatcaaccaaatatatacttccatgttataaaataaaattatacacctactgtgtagaagaagcctttaaatatttatataagtaataaccaagatagagcaacctttactttgtaaaatttgtagaaaattcatctctagtccaaatgaaatgaaccaaatttccatagaaccagcaaatagtgagcttcaacatagtaaaataaaatattgcaccttttgaacaggttatagctctaatctttaaatagataacctaggagttaatcacctagtaatggttaagcaaaatatatgtgtgaggtagttaaaaaaatgcattctagctatgaataaaccaaaataaaacttgttagaccagagaggccatagttccatccccatccaccaaaacttaaggcacttagctcatatagtaatttctaggttgatataataaattgctagcatagactagagctcccctagtttataaaaatatgaaccatgataataaagaccataagttatgaactaaggttagattagttaactaaaacacttattttatacgtcactaactagatgaggcaagttctggacctaaacctctaaagccatgaacctatagaacactatacacttataacacgttataatttacaaaacacataaagagttcatattaactccaaaaattgtgaaaccaaatgtattagtcttagaaaacaatcctctacacctctgtgaagtcaaaactaataaacatcactttataaaaatattttataacactacctaggtgatactaccttatactgaggaaacttctaaaattcataactcccaaataaaaagagataaaatagaaattctttcacctaaattcatattataccagtacctattcactgtgcacaaatcatccattttagagcattttggatttttcgcatatttcggtgtttaattgcataacgtgtactttgtatagatgattgcttaaacggtgaagaagtgatttaggtgctgacattttcctaattcaaggcaagtcccacctccctctctttgatcactttgaacctatgttttggaggttattgaaaatgtttgcaaatcttgcatgtcgattgtacactaataaattaaaattttgttaaacttgttagataaactcttattatttgcattatcaccttaactccacatatatccatattcctcattcctaaccttaggaacaatatgactataccactttatatatgagttttggtgacactaggttactgtaaagcttagccatgcttagaatggtcttccttgtaattatgggctcattacaaatatgaaaattgatttttaattaatctggacagaactttaatacttgtgattttgataaataaaatggtggaaaacatggattttaggtttgggcctcaagtggtgcacatatggtgattagttgtataccgataaggggagagtgcgcccaaaccgacctaaggacttcactcaatgtcagttcatttcgtatacagtgcaaccacatgtgctagtataggatagcccaagcttagtaaattatttatggtttagccttacattctggtaggccggtgtgtatgagttcgtataattcagaggagcttcctatttactccgaagtggtagtttaggtgactaagcgtgtccaatacaacggtattgtgccacgtggtgggttcccattgtgtccgccaccatggcgttaagtttaaggcgtggacccgccacttaacggttctaggtcatataacgtgtatggcttaggatggagtaacacgtatcgtgctggtgtaaggctaaatcatgaattttggaaaagctttgttgtgggtattaaatcgggtacttatgtatcgcgtgccatgctcttgcctgattattatttcgcatcatgtgggtaaagtgtacaaactctgcagagtaaaaactaatcgattagccgtgctcacggtcaagagcgacgtgtggatatgtattgagtatagacttgtgtttattcttctaaatgctgaaatttaccttcaaattgtgatgagatttgagaatgatctccttgctgccatggaaggcaatgaggtgcatatttatacatgattaatgcctaccttgatgcccaatatgtcaagtactagcttgctaaaatttatttgaaagtaaacctgatttagaaatgttttatgcaaataaaacttgctttatgctaaaaagaaccatattatgccttccttgattatatgccttgcaagtagggtgttaggcttgtcttggtgcttgccaaataatgtactgactcttgctattgaattaatcttttgctcgtaggttttagacttagtctttgagtgatgcgggtaatcgactgcttcttctaggacttgaacttaatggggtaaacccctagtcggtgtgcttgtggattgggtagataagcttccgctgttctatatatttatttggccggtcggccaatgtaactaaagtagatgtagtttataatcgctttcatcttatttgtgtttgctatgtataatcatgcttgagatgaaagtgttaatctagtgcacatcctgggaact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0561249, RefSeq:Os03g0561249