Os03g0563600

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0563600| Description = Similar to Peroxidase 56 precursor (EC 1.11.1.7) (Atperox P56) (ATP33)| Version = NM_001057030.1 GI:115453788 GeneID:...")
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Gene Name

Os03g0563600

Description

Similar to Peroxidase 56 precursor (EC 1.11.1.7) (Atperox P56) (ATP33)

Version

NM_001057030.1 GI:115453788 GeneID:4333262

Length

5493 bp

Definition

Oryza sativa Japonica Group Os03g0563600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21024277..21029769

Sequence Coding Region

21024409..21024660,21025201..21025389,21025972..21026170,21029138..21029544

Expression

GEO Profiles:Os03g0563600

Genome Context

<gbrowseImage1> name=NC_008396:21024277..21029769 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21024277..21029769 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagtgcgcgtgcttcttcctcctcctcgccggtggttcttgctttcttctctgctgctggtggtggcggcggctgttcccgtcgtccatggatacggcggcggcggtgggctgacggtcgggttctacaaggagtcgtgcccggaggcggagaagatagtgcgcaaggtggtggcggcggctgtccatgacgacccgaccaccaccgcgccgctgctcaggcttcacttccacgattgtttcgtcagggggtgtgaaggatcggtgctgatcaactcgaccaagaagaacacggcggagaaggacgccaagccgaatcacacgctggacgcgtacgacgtcatcgacgcaatcaaggagaagctggagcacaagtgccccgctaccgtctcctgcgccgacatcctcgccattgctgccagagacgccgtctccttggcaacaaaggcggtgaggcaaggacggtggagcaaggacggcaacttgtacgaggtggagaccggccggcgagacggccgcgtgtcgagcgccaaggaggcggtgacctacttgcccgactccttcgatggaattcgcaggctcatcaccaggtttgcttccaagggcctcagcctcaaggatctggctgttctgtcaggcgcccacgcgctgggcaacacgcactgcccatcgatagcgaagcgtctgcgcaacttcacggcgcaccacaacacggacccgaccctggatgcgacgtacgccgcggggctgcggcggcagtgcaggtcggccaaggacaacaccacccagctggagatggtgcccggcagctcgaccaccttcgacgccacctactacggcctcgtcgccgagcggaagggcatgttccactccgacgaggcgctgctccggaacgacgttaccagggggctcgtctacgagtacatgagatcggaggagagcttcctccgggactttggcgtgtcaatggtgaacatgggcagggtgggcgtgctcaccggcagccagggggagatccggaggacatgcgcccttgtcaactag</cdnaseq>

Protein Sequence

<aaseq>MAVRVLLPPPRRWFLLSSLLLVVAAAVPVVHGYGGGGGLTVGFY KESCPEAEKIVRKVVAAAVHDDPTTTAPLLRLHFHDCFVRGCEGSVLINSTKKNTAEK DAKPNHTLDAYDVIDAIKEKLEHKCPATVSCADILAIAARDAVSLATKAVRQGRWSKD GNLYEVETGRRDGRVSSAKEAVTYLPDSFDGIRRLITRFASKGLSLKDLAVLSGAHAL GNTHCPSIAKRLRNFTAHHNTDPTLDATYAAGLRRQCRSAKDNTTQLEMVPGSSTTFD ATYYGLVAERKGMFHSDEALLRNDVTRGLVYEYMRSEESFLRDFGVSMVNMGRVGVLT GSQGEIRRTCALVN</aaseq>

Gene Sequence

<dnaseqindica>133..384#925..1113#1696..1894#4862..5268#actcgctgcctgctcaaacacacacacggcactccatttttaacaagtgttttctctctgacaagccagctgcacttaagcattgctagagcgctaagctacctgcagcgtagtgtagtgtagtgtactgccatggcagtgcgcgtgcttcttcctcctcctcgccggtggttcttgctttcttctctgctgctggtggtggcggcggctgttcccgtcgtccatggatacggcggcggcggtgggctgacggtcgggttctacaaggagtcgtgcccggaggcggagaagatagtgcgcaaggtggtggcggcggctgtccatgacgacccgaccaccaccgcgccgctgctcaggcttcacttccacgattgtttcgtcagggtaaactaaaatgcattattactacttgtctcgttattttctttttatagattgaagtccaaatgtcatctttactcttttactactgattcaaaggtttcattattcaaagctaaaaaaaaaaagggtttaactgtgagctagtgaaggtgaaaaagtaaaaaggaggagaggataagatatgtgggttagctagattccttcaaaatgggccttttttctgcatcctgtttgattgcctttttgagtgaaatggcatccaaagccggtctaaaatgatgagatgcagtccatcatcagtcgtccacaaactaaagtggtgaccctctgaaactttctgtataaaataatcataaaaaaacactagtaatccactcacaagccctgacaagtgccaaattttttctttccacaagacaaacatccgcaatgccgtagatgaagtggtctgtacaaattaaaatgtgcaaattagcattctttcaagaccatgattgtttgatcgatatgttaccatggaattggtcgatgaacgtacaggggtgtgaaggatcggtgctgatcaactcgaccaagaagaacacggcggagaaggacgccaagccgaatcacacgctggacgcgtacgacgtcatcgacgcaatcaaggagaagctggagcacaagtgccccgctaccgtctcctgcgccgacatcctcgccattgctgccagagacgccgtctccttggtaatcactagtacctccgttttaaaataaatatagtcgtgagtatccgtgtctaatgtttaatcatccgtcttattaaaaaaattagtcacacataaagtactagtatttaccctccgctttccaatgtaagtcattttaatatttcctatatttatattgatgttaatgaatctaaatatatattaatattaatatgaatatgacaaatgctagaatgacttacattgtgaaacgatggagtatgttttatcacctaataataataaaaaatactaatcataaaatatttttaaataagaagaacaatcgaatgttggagattaatagtataaaactggacttattttgggacggagggagtagtaattaatgaagattattaattaataattccatctcataccttaatatgttgaaaaattttatcacaattttaatataatttttaatataaagtttgatctcttttagtactggagatatcgtgagagatcattttacacttaaaaaaatattgtaactctcaataccttatcagaaactgtaaaatcactctaagatgcaagtctttgtgcttaggcaacaaaggcggtgaggcaaggacggtggagcaaggacggcaacttgtacgaggtggagaccggccggcgagacggccgcgtgtcgagcgccaaggaggcggtgacctacttgcccgactccttcgatggaattcgcaggctcatcaccaggtttgcttccaagggcctcagcctcaaggatctggctgttctgtcaggtacgtagccacatatttaatctccattcagcctagctttcaggcgtcacacatacagtttcttgcagaccaaaagtgttcaaacttcacctgatgagatattgaggatatgtttagttcacgtcaaaattggaagtttcgttaaaattggaactatatgacggaaaagtttgaagtttgtatgtgtaggaaagttttgatgtgatgaaaaagttggaagtttgaaaaaaaaaattagaactatactcggtctgaaataacatatatagtaaaaattttgaattggcttcatgtgaaaacattaaaagattctagtggattcaccacgatagcattccaatagtggcaaaattagaccatgagtagtttcctgttcaggacaacatgtagttgccgatatatcacccgtgcacttccaatcattacttatacaaatatgcaaggaaaaaaatataaaggagatagtatgacatcatctcagtgaaaacataatgataccgttttcacaccactgaatttttttagaaaaatatagcaatatttttaatccaaaacaaacatattatcgtaatatatacaatattaaatttagtaaaactaatttattttgtgttatagatgttgctatatttctctacaaacttagttaaattttagaaaaatgattaaaaaaatcaaaacgtcttataatataaaatggattgagtagttttttacgcggttgttgggcatccagttctgcggcaatggctgcagcagtcaggtagcttacttgtgcctgtgtactcatagtggttgcagctgctccgttgtctggcaacatgaatagggcctatactaagagtgaaatattccaaaatgtaacaaattgacaacgaagtggtcagtactggtgatatgtatttaattactttccaatatttttgattgaattatttcaggtctaaaccccctgttcagttaaaaattttgaataacaaccatgtatatgtaatttttgtcatgaggtcgatatgatgccctacttgaaacccattgtagttttgtatgacaatgtcgaccgtcaaagctagtatcagacagagcatgaagtcacatgtctcttttactactggcctattgatgtcgcgtgtaggagaaactattacgatttgagaaagggcctgtagagcatgaagtcacatgtctcttttactactggcctattgatgtcgcgtgtaggagaaactattacgatttgcgaaagggcctgtagtctgtagcctagtgtttacgagagcctcagtagcatctaaggttctaggttcgactctctatgagagcgaattttctaggatttaacggtgttgtgctttcagtggtaggcgacgtacccgtcgacagcgaggcgcctgtggtgacttcgtcaatatcaaggattcgccggcctagtcttcgaagatgctcataggggtagggtttacgtgcgtacgttcataggagtaagtgcacgtgcgttgtgagtgtctgtgttgtactgtgtaatttcaaaaaaaaaaagaaactattacgatttgttcaaagtatagaacaacatcacacatttcaaggaataatcaattactaataaggggataaacggaatatggtcggtctcaaaattgccaaaatgaaaatcagacgcagaaaatataaaaaatcaaagaatgctgcagtacagacgtaaagtaccactggtggagaaatgctttttagtcctagttcgtaaccccctgtagtcccggtttttcaaccgggactacgaatccgggactaaagatcgctatctttagtcccggttcaaataaccgggactaaaaatcaatctttagtcccggttgatgttaccaaccgggactaaagatggaagaatctttagtcccggttgataacaccaaccgggactaaagatattttttcttttttttttctgcttttaatattgaatattgatttcacaccatcccctcccatatccaaatcatcacatattacagaacatctccaaatcctcaaacaaatcatctccaaatacatcacaaactcttaaaaaaattacatcacagggttctaaaaaattcatcacagattcacatctcacacaaaaatacatcacagattcacatctcaaaaaaaaaaagaaaaaaaatccggccggcggccactgccgcctcccctcctcgcatccgcgccggccggccagcgccgcgtcggtcgccgccgagcggccgcccaccgcagccgccgcctccgcgcggcccccggcaccgccgcgcggcctcccgcgccgccgcgccggccgcccaccgccgccgccgcgcggccccccgcgctgccgcaccggccgccgcgcaggccgcctccgcgccgtcccccgcgtcgccgcctccgcgccgaccgcctgcactgtggtgaaggaaaaaaggaaggagaggaggggagttagagataaggaaagagataagaagttagagaggaaaaaaagagatagagggaggagtttgttgtgtggacgggaaaagaggatcggtactatggattatatagtgtgttttgatttttattctcggttagtaacaccaaccgggactaaaaataggtttttagtcccggttggtgttactaaccgggactaaagatcatagggccctgacacagcctgacatggaatcaaccgggactaaaaatgaactttagtcccggttggagttaccaaccgggagtaaagatgatttttagtcccggttggtaacaacaaccgggactaaagatcttcctcttattaaccgggactaaaaatcatttttagtcccggtttttaatggaaccgggactattgtggatatgggtcgaccgaccaaagatggtttctctaccagtgtaccctagcattcttaaagattatttaactttgtttatattcttatgcatgacactttgaactttcaggcgcccacgcgctgggcaacacgcactgcccatcgatagcgaagcgtctgcgcaacttcacggcgcaccacaacacggacccgaccctggatgcgacgtacgccgcggggctgcggcggcagtgcaggtcggccaaggacaacaccacccagctggagatggtgcccggcagctcgaccaccttcgacgccacctactacggcctcgtcgccgagcggaagggcatgttccactccgacgaggcgctgctccggaacgacgttaccagggggctcgtctacgagtacatgagatcggaggagagcttcctccgggactttggcgtgtcaatggtgaacatgggcagggtgggcgtgctcaccggcagccagggggagatccggaggacatgcgcccttgtcaactagcaaaagctgctccatgctgatttggtgcccttcgccgatatctctgtgtacctgatcacctagagactaataggagtgtcgtctggattaattagggattatattatgtccaagtctgaaatctatgtgaaacaaattattgccgttgaaacatttgctagaattgtaagaaaaaaaatacgcaatgacggggcatcattctattttagtttaaaattctatttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0563600, RefSeq:Os03g0563600