Os03g0566800

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Revision as of 12:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0566800| Description = Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)| Version = NM_001057041.1 GI:115453810 GeneID:43332...")
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Gene Name

Os03g0566800

Description

Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)

Version

NM_001057041.1 GI:115453810 GeneID:4333273

Length

4470 bp

Definition

Oryza sativa Japonica Group Os03g0566800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21252574..21257043

Sequence Coding Region

21252857..21252970,21253598..21253683,21253762..21253930,21254669..21254788,21254896..21255003
,21255713..21255793,21255876..21256116,21256670..21256965

Expression

GEO Profiles:Os03g0566800

Genome Context

<gbrowseImage1> name=NC_008396:21252574..21257043 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21252574..21257043 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggccaccacgtcccggcgcggccccggcgccatggacgacgagaacctcaccttcgagacctcccccggggtcgaggtcatcagcagcttcgaccagatggggatccgcgaggacctcctccgcggcatctacgcctacggcttcgagaagccctccgccatccagcagcgcgccgtcctccccatcatcagcggccgcgacgtcatcgcccaggcccagtccggaaccggcaagacctccatgatctcgctctccgtctgccagatcgtcgacaccgccgtccgagaggttcaggccttgatactctcaccaactagagaacttgctgcacaaacagaaagagttatgctggccattggtgattacatcaatatccaagtgcatgcttgtattggtggcaaaagtattggtgaggatattagaaagcttgagcatggagtgcatgttgtgtcaggaacacctggcagagtctgtgatatgatcaagagaaggaccttgcgtacaagagccattaagctcctaattctggatgaagccgatgagatgttgggcagaggctttaaggatcagatatatgatgtctacagatatctacccccagagctccaggtttgcttgatctccgcaactctgccacatgagatcttggaaatgaccagcaagttcatgactgacccagtccggatccttgtaaagcgtgatgaattgaccctagagggcatcaaacaattctttgttgctgttgagaaagaagaatggaagtttgatactctttgtgatctttatgatacactgacaatcacccaagctgtcattttctgcaacacgaagagaaaggttgattggcttacagaaagaatgcgcagcaataacttcacggtatcagctatgcatggtgacatgcctcaaaaggaaagggatgccattatgggtgaattcaggtctggtgcaacccgtgttctaattacgacagatgtgtgggctcgaggcctggatgttcagcaggtctctcttgtcataaactatgatcttccaaataatcgtgaactttacatccatcgcattggtcgctctggacgttttggtcgcaagggtgtggccatcaattttgtcaaaaaggaagacatccgtatcctgagagatattgagcagtactacagcacacagattgatgaaatgccaatgaatgttgctgatctaatttga</cdnaseq>

Protein Sequence

<aaseq>MAAATTSRRGPGAMDDENLTFETSPGVEVISSFDQMGIREDLLR GIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQA LILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRV CDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEI LEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIF CNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGL DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYSTQ IDEMPMNVADLI</aaseq>

Gene Sequence

<dnaseqindica>4074..4187#3361..3446#3114..3282#2256..2375#2041..2148#1251..1331#928..1168#79..374#acaggcaggaagtctccccacccacgacgaccacccccatctccttcccctttctagggtttcgcttcgtctcccccaatggcggcggccaccacgtcccggcgcggccccggcgccatggacgacgagaacctcaccttcgagacctcccccggggtcgaggtcatcagcagcttcgaccagatggggatccgcgaggacctcctccgcggcatctacgcctacggcttcgagaagccctccgccatccagcagcgcgccgtcctccccatcatcagcggccgcgacgtcatcgcccaggcccagtccggaaccggcaagacctccatgatctcgctctccgtctgccagatcgtcgacaccgccgtccgagagtacgcctcctcttactcttactacccccatctttttcactactagctgccagacattttacttgtttgcgcccttttccgaatgcgcgatttattttacttcagattagctgttaggtacagtgcagtaattaggacctaaataaatgtctggataggattcatttttattccttactgcaactctcgacgtttgtgtagatttgctatggttgtgacttggcctccgagctatttgattcagggcaccgcaatttgtattctgactttctatgtcaaggctcatgtttttatctgttttttaccttatatattgctattgctataatattttctttcctgatctttcgtcggctaataattagggctaggaatttatattttttgaaagaaaaagaaactaggtattgtataatgtagtgatggcatccatgttaattatatgaatttttctatgccttgttctacttattaatgattattccctgtcattttctatgttccattaatcgttatgtctgttggtagttaatattgtttcttcattttaaagggttcaggccttgatactctcaccaactagagaacttgctgcacaaacagaaagagttatgctggccattggtgattacatcaatatccaagtgcatgcttgtattggtggcaaaagtattggtgaggatattagaaagcttgagcatggagtgcatgttgtgtcaggaacacctggcagagtctgtgatatgatcaagagaaggaccttgcgtacaagagccattaagctcctaattctggttagtttatttctcatgttgttttatggaacctttttttggtttgatcaaatggttggagaataacattcttcaattacaggatgaagccgatgagatgttgggcagaggctttaaggatcagatatatgatgtctacagatatctacccccagagctccaggtcaatcacagattaaaactgtactagactgatagtttgtcttgtgtttcaatgttcacccctcagtgaattgattcttttaaatttagctcctcactagtctataacatctaacatctactccctcgtcccaaaatatagctacctttagcattaaaattgtcccaaaatatagctacctttcctactaccttgtctcaaccaatcacaatcatcttccacttaatttcttcacctacttccctgtctcaacctatcacaaccatccttccaaccatccttcattttattttagacttctccataatacccgcgcctgactctaaaagtccttattttgggacagagggagcatttaatatcttgacctacttccctgtctaaaccaatcacaaccatccctcattttattttagacttctccttaatactcatgcctaacttataagtcctcatattttgggatagggagagcattttccatctctattgcagtttgtgttacactattctgtccatgttttgatggtttcttgtaacgtgtcatcatacgaacagactaagctgccttgtatctgtttggattctgtaatgcatgacttgttttctgatggcatagtgcttgaacttgatgtcaataactgatggcatatcctgggtagtcatatcccaatactaatctaccagcacatctttttcatttttacaggtttgcttgatctccgcaactctgccacatgagatcttggaaatgaccagcaagttcatgactgacccagtccggatccttgtaaagcgtgatgaattgaccctagaggtaaaacatcattacttgttttgcttatcaaacaaacttgatgatcttcattatgtattttactttgttggttttaatatgttcattttttcatatcatgtttatagggcatcaaacaattctttgttgctgttgagaaagaagaatggaagtttgatactctttgtgatctttatgatacactgacaatcacccaagctgtcattttctgcaacacgaagagaaaggtaatatatggtgctctttttttttttttgatcctttcagtgttgtttgtctacaccaaattgttgtgctatcttatggtcatagctcctttgtagttctttcaaacaccttttgttttttgccatctgggcagttgctattacagcatgtctcttgaaactttacttgtttgtacaatcctgcacgagttgatacttttagtttgctatgtttcactgttatcaagtcgctcgactagtcgtgattagccgtagatttgtcgtaaagttggtcaagctagtcgactagactagagaaccatggctccaccaaatagcaagttgtgcgattagttgttgttagttgtagattagtcgtaaaggcggtcatagattattcgtgatgagtcgtagcaaatcagcaattcaccatgctaattggcttattatatttagtaatttagttttattatttcttgttgactttgtcttattacttgctactccatactccatagtttatactatatacgttgcttagtacagtataatggtagtaattgcaccctgtttttgcatgaccaagttgtggactggtcgaccaagttgacaagtcggtccaggggtacctcgactcaactttacgacttaacaatcatgctattttttttaactattttgaattgcactgtgttccaaccatgcccacttgttgttattgatgtttttttttttatatccttggtttcctttggtcaggttgattggcttacagaaagaatgcgcagcaataacttcacggtatcagctatgcatggtgacatgcctcaaaaggaaagggatgccattatgggtgaattcaggtctggtgcaacccgtgttctaattacgacagatgtgtgggctcgaggcctggatgttcagcaggcaagattgttgtgatttttgtttgaagactattgattttactgcgcgtggagtattgattattattttcattttcaggtctctcttgtcataaactatgatcttccaaataatcgtgaactttacatccatcgcattggtcgctctggacgttttggtcgcaaggtaatgctacacctacacaactcaatcaaatgggatcaaatgcttggacgcatgctacactttctactgatacatttgtactaatacatatgtaccatggttttgctcaacacaatcacacattcaccgataatgatcatcaataataatccatcaaatgctttgacatttttttgttgtcagtatatgacaaattagaacacaggaattctgacttcacactgttgacacaaacacaatgtgtggttaacaaattgctggccatgatttaggtaaaacttgttaaagtttctgtatacgacatgcgggttaatggatatgtttttgtggcaagccaaacactaggctaagttggtaaacctccttgccaaagatgtggctaagtgtggctaccaaccaaacacccaacagttcatcacattatctttagattctagaaatgattaaacaatatttactctctgaattccaattttttttggaagtttaggaaagatgatttcaatacatctccatgcatccagccataagaaatgattattatcacgagctagctgactgcatactatataggtaacagtttgattgggcagattctaatgactaaataatcatttcatattgtagggtgtggccatcaattttgtcaaaaaggaagacatccgtatcctgagagatattgagcagtactacagcacacagattgatgaaatgccaatgaatgttgctgatctaatttgagtgcttgagtggcacaatcatgtttttgatcatctggtctggcaacaagtgagcttgtttgttgtgattttggttgacatgttttgccgagactgttgctgtgaacctaaaaagggttgcgagtctaacactagtgattggtttcgtttcctctttggcttgtggcatgatctgtatatattttagcgccagctcatgtaacactattattgcatttcttctctgaacgcgtgactttgttaactatattcatggcaacaaggatttgatgttggtttctcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0566800, RefSeq:Os03g0566800