Os03g0576600

From RiceWiki
Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0576600| Description = Similar to Acyl-CoA-binding protein (ACBP)| Version = NM_001057071.2 GI:297601213 GeneID:4333305| Length = 3166 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0576600

Description

Similar to Acyl-CoA-binding protein (ACBP)

Version

NM_001057071.2 GI:297601213 GeneID:4333305

Length

3166 bp

Definition

Oryza sativa Japonica Group Os03g0576600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21841518..21844683

Sequence Coding Region

21841518..21841656,21843206..21843287,21843399..21843461,21844268..21844385,21844672..21844683

Expression

GEO Profiles:Os03g0576600

Genome Context

<gbrowseImage1> name=NC_008396:21841518..21844683 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21841518..21844683 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtctgcaggaggattttgaggagtacgctgagaaggtgaagaccttgccggagagcactagcaacgaggacaagcttatcctctatggactctacaagcaggccaccgttggagatgtgaatacttctcgtcctggcatattcgcccagagggacagggcgaaatgggatgcatggaaggctgttgaaggcaaatcaaaggaggaagcaatgagcgactacatcaccaaggtgaagcaactccaggaggaggctgctgctctcaaggctgtgttatcagtggaaatctcaagaaaattcgatcgaaacatcttgcaaacctgcaaattcagtggccatggatgcccagaaaaattgccgggacaaaagtcatcaaattccagcgagttcttggtggctggtgcccactag</cdnaseq>

Protein Sequence

<aaseq>MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTS RPGIFAQRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLQEEAAALKAVLSVEISRKFD RNILQTCKFSGHGCPEKLPGQKSSNSSEFLVAGAH</aaseq>

Gene Sequence

<dnaseqindica>3028..3166#1397..1478#1223..1285#299..416#1..12#atgggtctgcaggtataaagaattacagatcactctctcaatccaccaacgttaccgttctacgcttaataccgctataaagatcaaatctttaaccatcgttcagtgagtcttgtcaaaagatctatgagatgcaaccttcttgtttaagatgctgcaattattccgtgaattgtaattttccgttgctttgcgaagtgtaattggcttaagattggaacttctgaagaaagatttagcgtgacagtgtgattgaagcatgatctgctaacaatttgtgtctgatatccaattgtaggaggattttgaggagtacgctgagaaggtgaagaccttgccggagagcactagcaacgaggacaagcttatcctctatggactctacaagcaggccaccgttggagatgtgaatacttgtatgtataccgaatatttggtattgagtattcagttgttacttctgttttttcaggcatgttctggatgtggagcacaattattgagttactagcgtactgtgtttgatttcattcagagacgtaaagtttacatggcatggattatgatccctaacacaagatctcatagatcgctaagatttttttttatcactccccaaaaaatctgtctgatttgaaacaataccgttctttcatagaatctttcacatcaaatttatggtgtattgggttcttccccatatttttataataatttgtgactgcaacaattgatattgacccgcactctacaacaattgatatggagtagaaatttgctgcatctagcttttcatagctttccatgttcagtcttctactgtgactatgtcctttcacaacatgtttgtgaaatcttatagtttttatctatatttttggttttgtgctgaaaagtagaagctactacatggtacatgtgctttgactatctatttctttgtataactttttttttttactaaatcacccgcagggggggggggggggggctcccacctgaatttgtcattgcaatgagggggagaacaaaagtatttctttgcctaacttgtaaaatctcactgctccttccaaattttgactatctattgccctcttgtcccttttctaatcaatcagtcaatttctgatatgaatttgactcaccttgccaacagctcttcatatggacttgtcacgacgatgttgcttagtatttccttttctataatcttttgaagctcgtcctggcatattcgcccagagggacagggcgaaatgggatgcatggaaggctgttgaaggtccatatgcttctctctgtccttacataactgtgtcttcctgtctgtccattctaatactcttgcctgtttctccgtgctcctgaactgaattttttgcattcttcgcaggcaaatcaaaggaggaagcaatgagcgactacatcaccaaggtgaagcaactccaggaggaggctgctgctctcaaggctgtgtttagggcctatttagttggtgaaatgaatatttttgagtgtcacatcggacgtttgaccagatgtcgaaggggttttcggacacaaatgaaaaaacaaattgtatactcgcctggaacccgcgagatgaatcttttgagcctaattaagccgtcattagcacatgtgggttactgtagcacttatggctaatattaggctcaaaagatccgtttcgcgatttacatgcaaactatgcaattggtttttttaaatctatatttaatgctccatacatgtgtccaaagatttgatgtgatgtttttacgaaaagttggtgtgccaaattttttttgacgtatacggacacacatttgaagtattaaacatagactaataacaaaacaaattacagattctgtctgtaaactgtgagacgaatctattaagcctaattaatccgtcattagcaaatgtttgttgtagcaccacattatcaaatcatggcgtaattaagctcaaaagattcgtctcgcaatttacatacaaactgtgcaattggtttttttcgtccatatttaaggctcaaaagctgaacaaactctgtgctatctggttgcgctttccattctatccatttgggatgtgaactactcccttcatcgatatttatttttgttacttactttattatccaaatttattatccaaagtactttaaacacaatttttcggtttttatatttgcacaaattttttgaataaggtggtcaaacagtgcaagcaaaaagtcaaaatcccttatattcggagacggagggagtatgtacctccttgtgtactgttgcataatttatacataagtttgtatgtgtaaaaaagtttgatgtgatgaaaaagttgaaagtttgaagaaaaacgttgggaactaaacaaggccttagtcctatggatcataatatcctgtaatctttcatctctctgtctgtgtactgcacaatagaaaaataatggttgccaagccagttacatgccccaatttcaagtggtaataagcagtaataaccatcatatcctggatcatattcctatctcagaagacaacacaatataaagagaaaacaaatgtattgatcagaaggccaaaaacatatatatgaaaaatgaaaatgcttaattgttcatagttagatagatcaacaacactgcactgcacacaaatatactgtttactcatcatgttcattcattctacacatgcatgatctcatctggcaatggcaacttggcaagaagccaagaaattcctgcaaaaaagatgaaatcttcagagatgtccatagcctaagacctgaccacctgagaagaggttgaggcagagcagccgagcagtgaagcagccagcagcgtccctggaatccacaacctgacaccctcgttggcgaacatggcgcacagcaccaggcacagcagcagcagcatgtagaaccccagcccggaccagcatccaccgccgccgccacaccactcgccgccgactgaccgggtttgatactccctccgtttcaggttatcagtggaaatctcaagaaaattcgatcgaaacatcttgcaaacctgcaaattcagtggccatggatgcccagaaaaattgccgggacaaaagtcatcaaattccagcgagttcttggtggctggtgcccactag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0576600, RefSeq:Os03g0576600