Os03g0577000

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Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0577000| Description = Similar to Ribosomal protein S3 (Fragment)| Version = NM_001057074.1 GI:115453876 GeneID:4333308| Length = 2413 bp| ...")
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Gene Name

Os03g0577000

Description

Similar to Ribosomal protein S3 (Fragment)

Version

NM_001057074.1 GI:115453876 GeneID:4333308

Length

2413 bp

Definition

Oryza sativa Japonica Group Os03g0577000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21857746..21860158

Sequence Coding Region

21858018..21858167,21858254..21858385,21858476..21858530,21859606..21859925,21860004..21860033

Expression

GEO Profiles:Os03g0577000

Genome Context

<gbrowseImage1> name=NC_008396:21857746..21860158 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21857746..21860158 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacccagatcagcaagaagaagaagttcgtgagcgatggcgtgttctacgcggagctgaacgagatgctgacgcgggagctggccgaggacggctactccggcgtggaggtgcgcgtgacgccgatgcgcacggagatcatcatccgggccacgaggacgcagaacgtgctcggcgagaaggggcgcaggatcagggagctcacctccgtcgtgcagaagcgcttcaacttccccgagaacggcgtcgagctctacgccgagaaggtcgtcaaccgcggcctctgcgccatcgcccaggccgagtccctccgctacaagcttcttggaggcctcgccgtccgcagggcttgctatggtgttcttcgctttgttatggagagtggtgccaagggttgcgaggtcattgtaagtggaaagctcagggcccaaagagccaagtccatgaagttcaaggatggttacatgatctcatctggtcagccagtcaatgagtacattgactcggctgtgagacacgtgctcctgagacagggtgttcttggcatcaaggtgaagatcatgctcgactgggaccccaagggcaaggttggcccgaccacccctctgccggatcttgtaaccatccatgctcccaaggaggaggaggagctgcgccctccggtgttgatcgctgaggcttaa</cdnaseq>

Protein Sequence

<aaseq>MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPM RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQA ESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISS GQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEEEE LRPPVLIAEA</aaseq>

Gene Sequence

<dnaseqindica>1992..2141#1774..1905#1629..1683#234..553#126..155#ctcgccgccgccactcccctctcgccttcctttccccaactaaaccctaactcctcgccgccgcctccgcctccgcctcctcgtcggagcagcgagccgctgctccttctcctccaccaccagccatggcgacccagatcagcaagaagaagaaggtacggtgcagatccctcgcagggtttcgattcgattcgattcgattctcctcgatctgatggtttttgttcatgtagttcgtgagcgatggcgtgttctacgcggagctgaacgagatgctgacgcgggagctggccgaggacggctactccggcgtggaggtgcgcgtgacgccgatgcgcacggagatcatcatccgggccacgaggacgcagaacgtgctcggcgagaaggggcgcaggatcagggagctcacctccgtcgtgcagaagcgcttcaacttccccgagaacggcgtcgagctctacgccgagaaggtcgtcaaccgcggcctctgcgccatcgcccaggccgagtccctccgctacaagcttcttggaggcctcgccgtccgcaggtatagcactcctttcaattgctacttcgctttgttgtcatggaggatgcatctgtgatgggatcttgtggtgcaacgtactagttgttttagttggttactcatttatacttagtacttatgaattcatcttcgtgacatatggaactattgaagggaattgtagtactgcactggttaaatgttttgtcctgcttcctgcccatgtttgtgggatactggaaccggtgcagaaaggaaatgctgctctctgaagcggcgacggccagacaaccgttgagatagatccacagatgaatggcttatgcgttgtttgtctactaattctatctcacattttcatgcacaattcgatcactttgatgctctacagttaaatctagcaagtggcaatacaatttaggatggaatgtttgattgtatttgtttaccgttgatgagatgtgttagtaggtgcctgggcagttctagtcaatatatgaatctgttgttttctggtgataagatttgttaggagctgtgcaatcttgttcaatcttttcgtgtgttcatcaagtcatttaattaattcagcattctatttctgctgcaaatccatgtgaatttatatagtgactgcaccagaaatcagttagtcctactttcattttatgatggtagggtgttaaaactggtgcacaaagaaagtactgctcttgaagcagtggcggccagacaaccgttgagatagatccacagatgaacaacctttctgttgcttgtctactaattctatctcacattatatgtgctataaccattcttgtttttggtctgattggtttttttgttcaatgaagttacatcatataatatcttttaatatatgcttaacgtaagtctattatattctttgttttgtacactgcttatcttcatgataatccaaggaaaattgttgtcttcatcatctggttcatatcatgttataacgtcaccttgttatggtagctttgttatgtgtgagctagtgcggaagtcgttctgatgtttctttcagatgtcattgtctctaatatgtttgtttacgtgacagggcttgctatggtgttcttcgctttgttatggagagtggtgccaagggttgcgaggtgagttccttgtacaataaaaattacatgtgcaaatgtgatattttgtacacacattaaagttgaactgatccctttattcttattcaggtcattgtaagtggaaagctcagggcccaaagagccaagtccatgaagttcaaggatggttacatgatctcatctggtcagccagtcaatgagtacattgactcggctgtgagacacgtgctcctgagacaggtttgtttggttcaactcaagcatcgtagtatttaaaaacctcatgatctttttggctcaacgcacttgttcattatcttttgcagggtgttcttggcatcaaggtgaagatcatgctcgactgggaccccaagggcaaggttggcccgaccacccctctgccggatcttgtaaccatccatgctcccaaggaggaggaggagctgcgccctccggtgttgatcgctgaggcttaagcttatgatgatatttcacatctttttgaagccttgggcatgtttgacagtaccctcttaaaactccagtttggccagttctagctaggtctctgtcttcagtaagggcaatgcaacagtcggttacttcagttttattatggacaaaagctatgtactggtgtcattttatttttttttaaactaagttttgccgagacaaaagttccagtcatatgtatgccaaatcttggtttgtagcctcaaatgcatcccatcttgtttgtgagcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0577000, RefSeq:Os03g0577000