Os03g0576900

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Revision as of 12:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0576900| Description = Amino acid/polyamine transporter I family protein| Version = NM_001057073.1 GI:115453874 GeneID:4333307| Length = 49...")
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Gene Name

Os03g0576900

Description

Amino acid/polyamine transporter I family protein

Version

NM_001057073.1 GI:115453874 GeneID:4333307

Length

4951 bp

Definition

Oryza sativa Japonica Group Os03g0576900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:21852092..21857042

Sequence Coding Region

21852216..21852392,21855264..21856739

Expression

GEO Profiles:Os03g0576900

Genome Context

<gbrowseImage1> name=NC_008396:21852092..21857042 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:21852092..21857042 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaacgcatggatctcgccgtcggtggtcgccctctgcccctctcccctcccctcatctcgcctcccgggttctgtcctctcctgctggccggacagccgcggcatccggcgcggggctggcgaggggacagccggacagacgctgcggccggcgaggggattcactgtagagaaattaaggaacacagcaataacacgagctaactcagcctgtcttccaatggaggattgtgttggtatcaagtacagcagtgtcaatgagggcgaagagcgtaagggaggccatggcgtcccaaaggtttccatcatcccactcattttcctcatattctatgaagtttctgggggtccgtttgggattgaggatagtgtcaaggctgctggcccactcctagcaattgctggatttctgctgtttgcactcatatggagtgtcccggaagccctgattactgcagagatgggcactatgtttcctgagaatggtggttacgtcgtctgggtctcttcagcccttgggccattctggggttttcagcaaggctgggcaaagtggctgagtggtgtcatagataatgctctctatccagtcctcttcctcgactatgttaagtccagcattccagctcttggaggtggtctcccaaggaccttggcggtgcttatcctcacagttgcacttacttacatgaactacagagggttgacaatagttggctgggtggcagtctttcttggcgtgttctctctactcccgttttttgttatgggattaatagctattccccgaatcgaaccctcaagatggcttgaaatggacttggggaatgtgaattggggtttatatctaaacacactgttttggaacctcaattattgggactcaatcagtacccttgctggagaggttgagaatccaaagagaacactcccaagggcactttcttatgctctagttttagtggtggggggatacctctaccctctgatcacctgtacagcagcagttccagttgttcgggagttctggacggatggatatttctcagacgttgcgagaattcttggtggtttctggttgcactcgtggcttcaagcagctgctgcactgtccaacatgggcaatttcgtaactgaaatgagcagtgattcttaccagcttctcgggatggctgagcgtggaatgcttccagagtttttcgccaagagatctcgctatggaaccccacttattggcatcatgttctccgcgtttggtgtggtcctgctgtcctggatgagcttccaggagatcatcgctgcggagaactacctgtactgcttcggtatgatcctggaattcatcgccttcatcaagctgagggtggtccacccaaacgcctcccgaccttacaagatcccactgggcaccatcggcgctgtcctgatgatcatcccacctaccattctgatcgtcgtggtgatgatgctcgcgtccttcaaggtgatggtggtcagcatcatggcaatgctggttgggttcgtgctgcagccggctctggtgtacgtggagaagagacggtggctgaagttctccataagcgcagaactgccagatttgccgtactcgaacgttgaggaagacagcacaatcccacttgtgtgctga</cdnaseq>

Protein Sequence

<aaseq>MTNAWISPSVVALCPSPLPSSRLPGSVLSCWPDSRGIRRGAGEG TAGQTLRPARGFTVEKLRNTAITRANSACLPMEDCVGIKYSSVNEGEERKGGHGVPKV SIIPLIFLIFYEVSGGPFGIEDSVKAAGPLLAIAGFLLFALIWSVPEALITAEMGTMF PENGGYVVWVSSALGPFWGFQQGWAKWLSGVIDNALYPVLFLDYVKSSIPALGGGLPR TLAVLILTVALTYMNYRGLTIVGWVAVFLGVFSLLPFFVMGLIAIPRIEPSRWLEMDL GNVNWGLYLNTLFWNLNYWDSISTLAGEVENPKRTLPRALSYALVLVVGGYLYPLITC TAAVPVVREFWTDGYFSDVARILGGFWLHSWLQAAAALSNMGNFVTEMSSDSYQLLGM AERGMLPEFFAKRSRYGTPLIGIMFSAFGVVLLSWMSFQEIIAAENYLYCFGMILEFI AFIKLRVVHPNASRPYKIPLGTIGAVLMIIPPTILIVVVMMLASFKVMVVSIMAMLVG FVLQPALVYVEKRRWLKFSISAELPDLPYSNVEEDSTIPLVC</aaseq>

Gene Sequence

<dnaseqindica>125..301#3173..4648#atttccccttcccctcccgagtccgcatcgcatcaggcagaggcggcgccagggcacgcatctccccttctcctcccgagtccgcatcgtcatcaggcaaaggcggcgccagggcgcacgctgcatgacgaacgcatggatctcgccgtcggtggtcgccctctgcccctctcccctcccctcatctcgcctcccgggttctgtcctctcctgctggccggacagccgcggcatccggcgcggggctggcgaggggacagccggacagacgctgcggccggcgaggggattcactgtagaggtcagtatttgtggaattgtggtcctgtggaggtcatgcatgcttcaatgcttcatggatggtgaatatgtgttcttgctgatattttatgatggtgtgccaattatgtacaatatttttctttgctaaattcacgattgtcttatacattttgtgctgatttgatggagttgctactcattgcggggctccggtcgggttgtggggccccgcaggggccggggccggggattgatttgcacccgcatgtccactcggggccggggccgggtggagagttcgggggtcagggccggggccgttccagcccaacccgcccccgacccgccctgttgccatccctacgcgcggctcgtcgaggcagcggacgggacgcccgcaaccagcgatgcttgggaaggtggagggggcggcggagcgagtcgaggatggcggcgggcgaagcccgggcaacggaggaagcgctcacagccaccgccgcgcggctcgtcgaggcgacggagggggcgtctgttgcggtgctgccgtcggagctcgagccgttggcatttgagacgggactgccacgtaaaccaaaaccacctgcaaagctgcttggggggttcatccggtatcgatagttgagggtggaaaacgttcggtttcgtgtttaagggggtaattcgtactttttcctttttccttttgaagatcattataacatgtttggatctgtggagtggataaggaggtagtagtatgtccgtccgatttttatttgttgcgtcgaacgtacagtagaaagcatttccggagaaggtaccgagatgttgtaaacttggagaacgatatttaactcactcttaacatttttaaccatgccactagtagtctagtggaatagtacatataaaagtggtgtgttttaatgtcgtagtctcgtggatatcacttacggatgatactactttctgtaattagacttgccattagtagttggtgagtagaattaagtatactgatcaccaccgatcacttggtagttggtactttctgggttggagttggactgtttcccaccaccgtcaccgccaccgccaccgccactgccaccgagatcagatcagaatcagacgagaagatccaacggccgacatcgcgcggcgtcagcaccggtgactcgactccacttgggctgcgtatccattcacgtgtccgccaccccccgcgcgcgagtatatctcaaagtcctcaacccgtcccttctctctctctcgtcttcacatcgctcatctccgcctcctccgagctcactgacaggtgggccccctccctcctccgagtcctcgccgtcgccgccgttgcctgctccgacctgacggacggagaggcggctggggctcgatcggacgccgccgccacgggaggccggaggaggggaggcacggcgaccggcgaccggccacgggtgggtgggtgcatgtcgacggccgccgcgtcagccgcgcgcggtaggtagatggtgagctcgcactccctcctggtttggattcgtttcctctcttctttttgtgtgtggctgctcggggatttcttagctgctgatgcggatgcggatgaggatgaggatgccgtgtgtgcgtgcgcccggagatcttctctcgttttggtcaatgaacaattgagaattgaccatgggtgggtgggaagaaatcctagtgttctaactattgatcgatccaatttgggcgcaccgtgttaatcgcgtctgaatcgagcatacccggatggagctcataactttttcttgcagaatctgacgaacagatgctggtttttaatggatgtaggcattgtagtgttcctcacttcagggttaccatctattgaattaaaccctcatgtactcaattacttttactcccatgtgccattcaatgttctcatacaaagaaaccaatgaatcttcagcttccagttgcatgctattgctttccagctcgccttccacgttggaaattgttgcttgcaagttgtggtcattgctattttgtacacttggttattggaaattggttctctcttggcctggtagaaatttggtatactatgtaaaaagctatgctgttttaattcatgtgggtgtttttttattctagaggagattcatatggatgttgagttgcgattatttgggctgtaagatctctttcaagcagggggaaaaatcacctcagttgtcgttgcaccatccacataatttgttgaataaaaaataaacttctcatttagttgctgtccttttcttgccactgttcatttcagctcttattataccatcccataattcactaatgaattcccgtttcgccgctgtccttgtcatgcgactatatatataggaaattggatgtagcatctcactttcactctggatgtcacactgatatgatgagcagagaatgctaatctaatccctggggtgtccgtggtgattttcttatgtcatgtacttccaccatggggctcataccttgctatgcttgagcattctcatagggaattgttgtttgcctctttatactgtgtttattgctgatatcaaggctacttgccttgtgtggttcgtttgatggttaaattattctgttatctgctttcaggttatttttgaagctattgatagctagaataatctaggactcttcactgaacttattcataagtcaacttaaaactcggatatgacaattgttttgaccgagtatgtaaatttacttagcttgacttttgaaaagttcaatttatatttcacatacatgtgttgcatggtgaaacaaggaacatccaatggattgcacttgtgttaattattattctttcctattgcagaaattaaggaacacagcaataacacgagctaactcagcctgtcttccaatggaggattgtgttggtatcaagtacagcagtgtcaatgagggcgaagagcgtaagggaggccatggcgtcccaaaggtttccatcatcccactcattttcctcatattctatgaagtttctgggggtccgtttgggattgaggatagtgtcaaggctgctggcccactcctagcaattgctggatttctgctgtttgcactcatatggagtgtcccggaagccctgattactgcagagatgggcactatgtttcctgagaatggtggttacgtcgtctgggtctcttcagcccttgggccattctggggttttcagcaaggctgggcaaagtggctgagtggtgtcatagataatgctctctatccagtcctcttcctcgactatgttaagtccagcattccagctcttggaggtggtctcccaaggaccttggcggtgcttatcctcacagttgcacttacttacatgaactacagagggttgacaatagttggctgggtggcagtctttcttggcgtgttctctctactcccgttttttgttatgggattaatagctattccccgaatcgaaccctcaagatggcttgaaatggacttggggaatgtgaattggggtttatatctaaacacactgttttggaacctcaattattgggactcaatcagtacccttgctggagaggttgagaatccaaagagaacactcccaagggcactttcttatgctctagttttagtggtggggggatacctctaccctctgatcacctgtacagcagcagttccagttgttcgggagttctggacggatggatatttctcagacgttgcgagaattcttggtggtttctggttgcactcgtggcttcaagcagctgctgcactgtccaacatgggcaatttcgtaactgaaatgagcagtgattcttaccagcttctcgggatggctgagcgtggaatgcttccagagtttttcgccaagagatctcgctatggaaccccacttattggcatcatgttctccgcgtttggtgtggtcctgctgtcctggatgagcttccaggagatcatcgctgcggagaactacctgtactgcttcggtatgatcctggaattcatcgccttcatcaagctgagggtggtccacccaaacgcctcccgaccttacaagatcccactgggcaccatcggcgctgtcctgatgatcatcccacctaccattctgatcgtcgtggtgatgatgctcgcgtccttcaaggtgatggtggtcagcatcatggcaatgctggttgggttcgtgctgcagccggctctggtgtacgtggagaagagacggtggctgaagttctccataagcgcagaactgccagatttgccgtactcgaacgttgaggaagacagcacaatcccacttgtgtgctgacctgcatatgcatgccatgaaagtagaatccccaaccatagccatgctagacggaaggaacactgcgatttgcgacttgtttcgtctcacggcttttcaaagcctcttcatctgccatgtataattagaagagaagcaagttcaaaattgtgatcatgctatttgtataccatgttggcgtcagggaggattgtaaatcccagggccagtttgaggaaaatacttcacttggctattgccaatagcacctggttattcgttcattatatatgtgctgctgctcttgttagagagattctgagg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0576900, RefSeq:Os03g0576900