Os03g0598100

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Revision as of 12:47, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0598100| Description = Similar to ACR4| Version = NM_001057143.1 GI:115454014 GeneID:4333383| Length = 2930 bp| Definition = Oryza sativa ...")
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Gene Name

Os03g0598100

Description

Similar to ACR4

Version

NM_001057143.1 GI:115454014 GeneID:4333383

Length

2930 bp

Definition

Oryza sativa Japonica Group Os03g0598100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23041848..23044777

Sequence Coding Region

23042125..23042134,23042523..23042595,23042713..23042758,23042901..23043015,23043109..23043188
,23043284..23043883,23043980..23044084,23044178..23044510

Expression

GEO Profiles:Os03g0598100

Genome Context

<gbrowseImage1> name=NC_008396:23041848..23044777 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:23041848..23044777 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccatggatgaagggtatggccctacctgggacagcgacgacgagtacgacaacttcatacgcaagatgaacccgccaaggatcgagatcgataatgattcatgcaacgacgccacgattgtcagggtagacagtgcaaatgagtatgggattctccttgaagtaatccaagttctgattgatctgaatcttgtgataagtaaggcgtacataacctcagatggtggatgggtcatggatgtctttaatataactgacaaagaagggcagaagcttaaagataaggctactattgcgcgaattgaagactacatttgtaagtctttgggtgcagattcaagatacataccttctcgccggagatcagtagatgtcgctgcttcgagtgatcacaatgtcattgagctgacagggactgaccggccaggcctcctctctgaagtcagtgcagttcttgcaagcctcaagtgcaacgttgtcagcgccgagatctggacccataacaccagggctgccgccgtgatgcgagtcaccgatgagggcaccggatcggccgtcacggacgccgacaggctcgagaggatcagggataggctgtcctaccttctccggggaggcaacctctcgcgcggcgcggccatggcggtgtcgacggggacctgcagcacgcacaccgagaggaggctgcaccagatgatgctggatgatggcgaccatgagcagctccatcggcatcctccgaatcagtcccagaggcccaatgtgacggtgagcaattggaatgacaaggactactcggtggtcaccatccgatgcaaggaccggccgaagcttctcttcgacacggtttgcaccttgacagacctgcattatgttgttttccatgcaaatattgatgccaaggataatcaagcttaccaggaattctatgtgaggcatgtaaatggatctccaatgcacactgaagctgacaggttgcgagtcatccagtgccttgaagctgctattgaacggagggtgtctgagggtgtgaagcttgagctctgcacaaatgacaaggtcggcctcctgtcagaggtcacccgaatcttccgcgagaacagcctgactgtcacaagagcggaggtgagcacgagaggaaggatggctgtcaacacattctatgttcgcgattccacaggagggacggttgatcagaagacaatagactccatcaggcaagccataggccagaacattcaggtgaaaggccagcctgagccatcagagccacagaagaaagagtcacccacatggttcctcttcgccaacctgtttcgaccgagatctctctacagtttcgggatgttcatgcgctga</cdnaseq>

Protein Sequence

<aaseq>MSMDEGYGPTWDSDDEYDNFIRKMNPPRIEIDNDSCNDATIVRV DSANEYGILLEVIQVLIDLNLVISKAYITSDGGWVMDVFNITDKEGQKLKDKATIARI EDYICKSLGADSRYIPSRRRSVDVAASSDHNVIELTGTDRPGLLSEVSAVLASLKCNV VSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRLERIRDRLSYLLRGGNLSRGAAMAVS TGTCSTHTERRLHQMMLDDGDHEQLHRHPPNQSQRPNVTVSNWNDKDYSVVTIRCKDR PKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEFYVRHVNGSPMHTEADRLRVIQCLE AAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRD STGGTVDQKTIDSIRQAIGQNIQVKGQPEPSEPQKKESPTWFLFANLFRPRSLYSFGM FMR</aaseq>

Gene Sequence

<dnaseqindica>278..287#676..748#866..911#1054..1168#1262..1341#1437..2036#2133..2237#2331..2663#agattttgggggaacaaggagagagagaagaggagagaagaggccattcttctcttctccaccacctactctctctctctctctctctcatctcctgccttctctctaggatcgccgccatccaccacatcccacgctttttactgccgcacacataagagcacaggaggaggaggaagaagaagagtagagagagaaagatagagagaggagcaggagaagcattcgttcatccaggagagagagaggcttcaagttcttggtctcctgctctgccatgtccatgggtatccatccatctctgctttctctctccctgttgtgttgggctttcttgttcatgtccttggaatgtaaagtttggttctttttttttatggtacctttgtccttcctttcctcttgatttcatttagtaacggtgttaggaaggaaggatattctttctgctctgttcttgattttgtttatcaattttcctttttttatggctcaccctctttcagatattgccatatcagaaataaaaaatctgattttttttcatatattattcatcatactagttttaacctttttttttttgaaaaaaaaatatgagagagaagaaaaatcagcatgtttcttgctgttcatcagaagctgtagtgaaatttaatggctgcatgtggacagatgaagggtatggccctacctgggacagcgacgacgagtacgacaacttcatacgcaagatgaacccgccaaggtgcattcacgtgctcctctgctcctgcttgtctcaattttgggagattactatctcatactgttatgttattaattctcgattcttcatcctgcttgtttcctttattaactgtaggatcgagatcgataatgattcatgcaacgacgccacgattgtcagggtaatggccctactattttttttaagtgaataatggccctactatcatctgcaggatattcctaatccacttgatgaagattcttgattcatctctttagtgagaatagatactgattcggttttggtggtaaattgcataggtagacagtgcaaatgagtatgggattctccttgaagtaatccaagttctgattgatctgaatcttgtgataagtaaggcgtacataacctcagatggtggatgggtcatggatggtaataataaagcatatagtttactaattagtttacacctacatattcattttttattttttattttttaactaaatccctatttggtttcagtctttaatataactgacaaagaagggcagaagcttaaagataaggctactattgcgcgaattgaagactacatttgtaaggtatacaagaatccttggcaatcttcagtatgactactgaatgatcacccaaattggactgacaactaatgcatttttcttctgaaaatctacagtctttgggtgcagattcaagatacataccttctcgccggagatcagtagatgtcgctgcttcgagtgatcacaatgtcattgagctgacagggactgaccggccaggcctcctctctgaagtcagtgcagttcttgcaagcctcaagtgcaacgttgtcagcgccgagatctggacccataacaccagggctgccgccgtgatgcgagtcaccgatgagggcaccggatcggccgtcacggacgccgacaggctcgagaggatcagggataggctgtcctaccttctccggggaggcaacctctcgcgcggcgcggccatggcggtgtcgacggggacctgcagcacgcacaccgagaggaggctgcaccagatgatgctggatgatggcgaccatgagcagctccatcggcatcctccgaatcagtcccagaggcccaatgtgacggtgagcaattggaatgacaaggactactcggtggtcaccatccgatgcaaggaccggccgaagcttctcttcgacacggtttgcaccttgacagacctgcattatgttgttttccatgcaaatattgatgccaaggataatcaagcttaccaggtgaatatgctgaaccaaacatgtcctaatttgccatatccattcttcatgagattcagtttgagaaaacatgtgacattgggggcgcttttgtaggaattctatgtgaggcatgtaaatggatctccaatgcacactgaagctgacaggttgcgagtcatccagtgccttgaagctgctattgaacggagggtgtctgaggtaacaactgaatgaacttttactgtctcaacaaagtagaaatcaggaccggtgttcactcgagaacatcttctgaatgttggttgttttcagggtgtgaagcttgagctctgcacaaatgacaaggtcggcctcctgtcagaggtcacccgaatcttccgcgagaacagcctgactgtcacaagagcggaggtgagcacgagaggaaggatggctgtcaacacattctatgttcgcgattccacaggagggacggttgatcagaagacaatagactccatcaggcaagccataggccagaacattcaggtgaaaggccagcctgagccatcagagccacagaagaaagagtcacccacatggttcctcttcgccaacctgtttcgaccgagatctctctacagtttcgggatgttcatgcgctgatctcatgagccgatcccgaaaaccgcactgaaaattcttagctgacgaagaggcccaagaattcaggaagttacagagagggccttcattctgttcaagacttaccagtggagtggcgcaggaatggaatagtagtgtaggggttgtttatagatcatcatcatttgtaaatatactcgaattcgccatgtccacattgtacatatgtagataaatcatgtaaatataactgtggaagatattgttttataagaaatatgttagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0598100, RefSeq:Os03g0598100