Os03g0607600

From RiceWiki
Revision as of 12:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0607600| Description = Similar to Cyclin| Version = NM_001057175.2 GI:297601299 GeneID:4333422| Length = 5418 bp| Definition = Oryza sativ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0607600

Description

Similar to Cyclin

Version

NM_001057175.2 GI:297601299 GeneID:4333422

Length

5418 bp

Definition

Oryza sativa Japonica Group Os03g0607600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:23605718..23611135

Sequence Coding Region

23605718..23606062,23606160..23606392,23606486..23606561,23606685..23606761,23606861..23606894
,23607001..23607150,23607237..23607371,23607458..23607525,23611066..23611135

Expression

GEO Profiles:Os03g0607600

Genome Context

<gbrowseImage1> name=NC_008396:23605718..23611135 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:23605718..23611135 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcaaggagaacgccgcggcggcgcagccccgcctcacccgcgccgccgccaagcgcgcggccgccgtcaccgccgtggccgtcgccgccaagcgcaagcgcgtcgcgctcagcgagctccccacgctgtccaacaacaacgccgtggtgctcaagccgcagccggcgcccaggggcggcaagagggccgcctcccacgccgccgagcccaagaagccagctccgccgccggcgccggcggtggtggtcgtggtcgacgacgacgaggagggggagggggatccgcagctctgcgcgccctacgcctccgacatcaactcctacctccgctccatggaggtgcaagcgaagcggcggccggcggcggactacatcgagacggtgcaggtggacgtgacggccaacatgcgaggcatcctggtcgactggctcgtcgaggtcgccgaggagtacaagctcgtctccgacacgctctacctcaccgtctcctacatcgaccgcttcctctccgccaaatccatcaaccgccagaagctgcagctcctcggcgtctccgccatgctcatcgcctcgaagtatgaggagatcagccccccaaatgtggaggatttctgctatataaccgacaatacctatatgaaacaggaggttgtcaagatggagcgcgatatactgaatgttctcaagtttgagatgggcaatcctacaaccaagacgttcctgaggatgttcatcagatctagccaagaagacgataagtatcctagccttcccttggagttcatgtgtagctatcttgccgagctgagcctgctggagtacggctgtgttcggctcttgccatccgttgttgcagcctcagtggtgtttgttgcaaggctaacccttgattcagacaccaatccttggagcaagaagttgcaagaggtgaccggctacagggcatctgagttgaaggattgcattacctgcatacatgacttgcagctaaacaggaaagggtcatctctaatggctatccgggacaagtacaagcaacataggttcaagggcgtatcaacattgttaccccctgttgagatccctgcatcatacttcgaagacctaaacgaaaagaatagaagaactgaacagcaaaaccttcagaagttcagaggtgtggtatctgaagaggcagactaa</cdnaseq>

Protein Sequence

<aaseq>MAGKENAAAAQPRLTRAAAKRAAAVTAVAVAAKRKRVALSELPT LSNNNAVVLKPQPAPRGGKRAASHAAEPKKPAPPPAPAVVVVVDDDEEGEGDPQLCAP YASDINSYLRSMEVQAKRRPAADYIETVQVDVTANMRGILVDWLVEVAEEYKLVSDTL YLTVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYMKQE VVKMERDILNVLKFEMGNPTTKTFLRMFIRSSQEDDKYPSLPLEFMCSYLAELSLLEY GCVRLLPSVVAASVVFVARLTLDSDTNPWSKKLQEVTGYRASELKDCITCIHDLQLNR KGSSLMAIRDKYKQHRFKGVSTLLPPVEIPASYFEDLNEKNRRTEQQNLQKFRGVVSE EAD</aaseq>

Gene Sequence

<dnaseqindica>1..345#443..675#769..844#968..1044#1144..1177#1284..1433#1520..1654#1741..1808#5349..5418#atggccggcaaggagaacgccgcggcggcgcagccccgcctcacccgcgccgccgccaagcgcgcggccgccgtcaccgccgtggccgtcgccgccaagcgcaagcgcgtcgcgctcagcgagctccccacgctgtccaacaacaacgccgtggtgctcaagccgcagccggcgcccaggggcggcaagagggccgcctcccacgccgccgagcccaagaagccagctccgccgccggcgccggcggtggtggtcgtggtcgacgacgacgaggagggggagggggatccgcagctctgcgcgccctacgcctccgacatcaactcctacctccgctccatggaggtacgccacatctctcgtccatgtcgccctccgcttccttcgcccgccgtcgccatttccaagatctaacgaggcgccgtcgtgcgtgcgtgcgcaggtgcaagcgaagcggcggccggcggcggactacatcgagacggtgcaggtggacgtgacggccaacatgcgaggcatcctggtcgactggctcgtcgaggtcgccgaggagtacaagctcgtctccgacacgctctacctcaccgtctcctacatcgaccgcttcctctccgccaaatccatcaaccgccagaagctgcagctcctcggcgtctccgccatgctcatcgcctcgtaagcgccgcccgtttcatccccgcccctcgctgagatttacccatcagttcaagaatcgatatttacttcggattggtttggtggatccaggaagtatgaggagatcagccccccaaatgtggaggatttctgctatataaccgacaatacctatatgaaacaggaggtgggtactgatctgatctctctttgttcatgtgcctgagtacgatttggtttcagatcttgcaagtgtttgatgctaaattgctgattgagtcgtgttcttgttgcttgtgtcgatgcgtaggttgtcaagatggagcgcgatatactgaatgttctcaagtttgagatgggcaatcctacaaccaagacgttcctgaggtaaaaccacaaaccaagttaatctgaaatgtttcgtgttaatcaccatggatctgtatctgacctttttctctctgtttttccctactctgttttcaggatgttcatcagatctagccaagaagacgataaggtagcaatccacaaatctcatcttctatactccttgttaaattacttgattactctgtaggagtacatgtttgttgatctcaaagtatttgtgattcttgctgcagtatcctagccttcccttggagttcatgtgtagctatcttgccgagctgagcctgctggagtacggctgtgttcggctcttgccatccgttgttgcagcctcagtggtgtttgttgcaaggctaacccttgattcagacaccaatccttgggtatgcaaacaattccattgcatccaaagctttcattgaaccatattttgtgaaatggcaattcatctgtttctgtgtggttgcagagcaagaagttgcaagaggtgaccggctacagggcatctgagttgaaggattgcattacctgcatacatgacttgcagctaaacaggaaagggtcatctctaatggctatccgggacaagtacaagcaacatagggtaagcttgaatcttttacaattggagaatcttcttgacatcttattcatttagtactaatctaattgcgcattcatctctaacagttcaagggcgtatcaacattgttaccccctgttgagatccctgcatcatacttcgaagacctaaacgagtagatgttactggatgatgatgtggtgagattaagattgagctttcctcaagatagatccatggtgactgaagttgaaagggggcttgtcagtacactcagtacaagagatgtcctaccttggatgctggactgtcaaagcttagctaggagctcttagggttgatttattaagctgaagcttagtacacttcagtaagatgctaggcatgtggagagttgtacctctgtatcatattcatacattacaacctgatgccttaatttttgggccagaactgcaatacttgatttgctagtcctcatgccattttttctttgctattgattatttgattcttttattcatatagcttggctgttagcctgttactactatagttaagatgccttttagtaggcagttccacattagaggtcagaattacttatctagctgcaactctaaacatcttagtatgcaccaagtgatgtgctcttcacattacatgtatcttcatatgactggtgatcatttctagcacaatgtttttgccagtaagaacatctgaattcatgagggttctcagctattttcatagcggaattttgcagatcatttattaacttgtgcatcacttgaggtggtttgctgcaatgcattgaatcttctaatatgctggaccaatttttgtctgtgccataacctgagtttatagcccagaactaagatcatggtgctgatttttgggtgaagttttgttactcagtacaaaacatgtggtccggataatgtcttgctaatgattttcccatagtttgctcatgttcttacttggtacttattacagtgactccatgttgagaacctccatttctacagcgtgttcagtcaagttttagacactctggagtccggtctatactgaaaacatgttatttttcaagatgatttcagcttaccacttggcatagagttaacaaagttctggcttctgagcctgtctttcaccagtaggtgttaggagtcctttttgtccatcctacttcagttgaacaactaaaagattaccatgtaaaacaataatgagtttctattttagatactgaactcagttcaacgactcaaatgagttcaggtatgtaccataagtctttcaaagcataaggtttcccttagtccttgttcggttaatccctctcccaggagattaacaagcccttaatgaggtaaagaaaaggggaaaattttagtttcttcagtggctgacattgttttgtgctaatgagaaatgagtttgatagtatttcagaaacaaagaaggtaacatgccaaagaaaattggcacacaggtcaattctttctctttttgtttccctcagaataaaaacactttgaagaatatttctcctaggagattaaccgaacaagcccttaacgaggtaaagaaaaggggaacattttagtttcttcagcggctgacactgctttgtgctaatgagaaataagtttaattgctttttagaaacaaagaaggtaacatgccaatcaaaaattggtatacaggcagcttttcaattatctcgttttgtttccctcagaataaaacacttcgaagaacatttcttgaccctgccttgatcacttcaaaagctttgcacatactccatccgtctcaaaatatatgacattgttaattttttgcataacgtttgaccattcgccttattaaaaagataatataaatgatatgcgaaaggtcaatggtgtcgtacattttgagaaggagggagtagatcacaagtccaaaactactttgcgattatgttatttgcaggcactgatcaagtgattatataaatcatgtgaatagttagagttctagggctaaagtagaccctaaaacagaattggtttctgttgagggaaaaggagaacttctccacaagagactgcttatttgtttgaaaataaaagtgaggaaccaaagtataacagaaactaaactattctctgctagtataacttccataccaagacacttcttatttgtttcttttcttcaatcctaattcaaaagtacaagcctacaaggcgtgcatgaagataaaatgtttttttttgaaaaaaatgaagatatgatgcatgtttctctcttttagcatcagttatctttcctatatcctctatttatgggcgattgagtacacgctcctcacttttattttcaaagttttaaaactactgatacggtgataccacattcatttccataattgtctcgatccccatgcaagtgaaacggcaaggcatcttttcaaaggcagctaaagagtagcacaacctggtagaatgttcctccaaggtttcaattatgcccttgtttagaaccaaactttttcttcaaatttccaacttttccatcacatcaaaattttcctacacacaaatttccaacttttccgtcacatcgtttcaatttcaaccaaacttccaattctggcgtgaactaaacacaacctatatcttcataaaaaaacactgattgtacctactatgcatctatgattaattaaggctgtgtttagttggatccaaagtttagattttggttgaaattggaaatgatgtgactgaaaagttatgtgtgtatgacaggttgatgtgatggaaaatgactgaagtttagatccaaactttggatctaaagacagcctaagtacaactgttttagaaaaaaagaaatggagaaatcactttacaatttctcttgaagaacaaggtgggcttttattcccaaccttgccaggacccggttttgctacagcctgtagtgagaccgcaacttaaacagttaacagtcccgctagggctatcagatctgaatccaagggctcagattgacccaagtactaggtttactgtatcagatatgctactatcttgggagatgccaatacttgtggaacaccaagctaaaattagtgaaccaggtatgccttttcttttgctgatatgtctccatcttatcctattgctgagcctgagtagtggaattgcaactgcaacttgatgagcgggaacatctgggaagagttctgtactgtccaattgtccatgtcaggcttgcattccccggaccaaagtcagattttaaaggccataatagtgaagcacaactagcatagcaccaaactctgctactgttatcgaccagttctttgattccgacatgcaattttctgctaatattaggtttgtccccttttttttttgttctctcttttgatatccttttcttcataggtagtgcaagattttgaactggtttaaaaaaaaaaattctttctttcctagtactactgcatatttgtgctctacttatgtgccttttaagaagaaaaagctgcacatacgacaccaccattaggcagtgcagattgcagaattacatcctttattgtcatatcctctgttatgacataatttcaacatgattatcctggatttcaaactaagaacatccgcagagatgtacttgctgaatttcacatctgaagaaagaatagaagaactgaacagcaaaaccttcagaagttcagaggtgtggtatctgaagaggcagactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0607600, RefSeq:Os03g0607600