Os03g0620500

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Revision as of 12:48, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0620500| Description = Transcriptional factor B3 family protein| Version = NM_001186617.1 GI:297722364 GeneID:9268513| Length = 5403 bp| D...")
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Gene Name

Os03g0620500

Description

Transcriptional factor B3 family protein

Version

NM_001186617.1 GI:297722364 GeneID:9268513

Length

5403 bp

Definition

Oryza sativa Japonica Group Os03g0620500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24293660..24299062

Sequence Coding Region

24295362..24295484,24295898..24296110

Expression

GEO Profiles:Os03g0620500

Genome Context

<gbrowseImage1> name=NC_008396:24293660..24299062 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:24293660..24299062 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggacaaggttcccagatgaagaaatactgtgattgctgcaaaagatatgtggaccattccaatggaaagatgaaatgcttccacaggcaaatgagtgctaattttgagcatagcatgatcataccaaacaagttcttggaccaattcggagggaaaatatcaagaacagttgaactagaatcccccaagggcaacgtgtatgtcgtcaaagttagcaagcacatgaataagacagtcctccagtgtggatgggaggcatttgtagatgcccatcagatagaagagaatgactccttattgttccgtcacatcaagaattcccggttctga</cdnaseq>

Protein Sequence

<aaseq>MAGQGSQMKKYCDCCKRYVDHSNGKMKCFHRQMSANFEHSMIIP NKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLL FRHIKNSRF</aaseq>

Gene Sequence

<dnaseqindica>1703..1825#2239..2451#aggagcctcacttggccttgggaagttgggaactcatcaggcgagttcgtccaccagcgggccggaaaagcgcaactgctgcagcggcaaatctcccttcaagacgactattccaaacccagaggtagtaactctttgttgttaaacaactaagtactaacaaattagtcaaaatttgaaggtttctgtctttttcttcttttaaatttgaaggtctatgtctttttctttttttttttgtttttgtatattatgatccataatttttttaaggcgttgggtgttataggtgttttagcgtcgggagtgatcttgaggtgcttgtatgatggtgttttcggtgtgaaccctttcttaggtcgatgtgtatctcgtctctatcaatgaaataagacagggtttctaccttcgttttttcttaaaaaaaaggaaaatgaacaaacgaggagaatcattttctatttcttaatgtgaacaagattacttccctaggtttggattgtgatagagtaaggagcaatttcaaagtcatgacaaaatggagaatgaaacgtccaaggttctagatttgttcagtagattgattatctgcactggttgtatagctgactagagattggacaaaagaaaccggtgatttaatctggctgttggatcaatttgtcacgtaaggaagaagactgctgttgttatgcctcagattctgttgtaatacattaacactgtaaaaatatttggagttttgacatagtctttccgacagatatattcccatatcattttcgtatctctaacataaatattcattaagatgttgattgccaaagttttactaattttgactgtctgtattccagcgcaagatcgagtaatcatggttattagtgtgcagataactccctaataaatcatcttactaatttctttggttagtgggggttttcattagttaccttattgacagcacgctcattggaagttcaagtgattctgacttttggtcttggacccccttttgttctctgcatacagttgcttggtactccctgtaggtttagttttgaacaagtacaaggtcttcagaaaataaatttcaccactatttttttattataatatacatagaaatatcaacaaatatatggttttattttaatactaatctatacatatggtctccatatttctttgacaaatactttagaaattattcatagtcaaagattttaaagtttcatatcagctttgttcaaaacgataagtattatcatcctggagagatcgagagagtataatataagctccacataactttgagaagcacctatccttgcttaggtgtccattttgatttaaaatactactccctctgcccctaaatataagagattttggttaaatgtgacacatcatagtataatgaatttggacatgaaacatgtctagatttattgtactaggatacgtcatatctaaccaaaatttattatatttagggacggagggagtattaacctcttcataacttccccgaaaaaaaaaaaccctcttcataacttttttatctctatctactgctccacagtataattctggtgataaaaaagtactctctttgttgattagttgcatctgtacctttaatcagcacttgctgattagttgcatcttcagctgacataagctacaaatttcagttcatatggctggacaaggttcccagatgaagaaatactgtgattgctgcaaaagatatgtggaccattccaatggaaagatgaaatgcttccacaggcaaatgagtgctaattttgagcatagcatggtaagcctgcagctaagaccactcacttttagtctcatattcttcatggtggattgattggattttgcatgtgattagtttatcgcttatctgatgaacttgattaagtttcaagtggtatgctaatcaaacatgctgaaatgcaagctagcatgggagcaaaattcactagttaaaaaccttgggtttcttgataacagtttacatgcaaggatgactcattgtaccaagtactccaaagtcctaaattctaagctgaagttgatcactatatcatgtgttcgaaaataaaaatgttttgttatgccattgtggacttctcattaacaatatatcaagtgttgtatgaaactaggaattgctctattcacaccaataccattatgttacactgttattttttttctctacagatcataccaaacaagttcttggaccaattcggagggaaaatatcaagaacagttgaactagaatcccccaagggcaacgtgtatgtcgtcaaagttagcaagcacatgaataagacagtcctccagtgtggatgggaggcatttgtagatgcccatcagatagaagagaatgactccttattgttccgtcacatcaagaattcccggttctgatccttgattctgatggttgtgagaaagtattctcctgttctggcaaaagaagggcctctggtgttcaagaaagaaatgcagatcctatcgatgtttcaagcagcacccatgatgataccgtgcaatcatccgggggtgaaagatttgctagaagtgaaagtggtagtgacagtcagcatagtaaaaccgcgaaattggcagcgacatgttcatctgggggatcaggtctaaattgctgattctcttctctgtgaaccttttttgtactatgcttcagctacacatttttatattagattttatagttaactgaaaagtggagttttttttttctatatttgccttgttgagaatgcacaggagaggaggccaaggagagcagcagttctgaacatgagtcatcctatgatctagttgatcctcagatagctccaatgcctggttatgtcttgtcgcgcgggactaatctatctcaagcacatgaggagaaactagatatgcttgtccaggaaattcgacctgaaattcctctatatgtgactaccatgaagcatagcaatgttaactcacaccatgcttcccttgtaagttctgccttttttttaatcaagtacataggccataatccatgcattttacacaatataattgttttacctatttataaaagaaacaaaatgcagtgaattagatgcaggcatcccacaatcatttgagaagctagattagaaatgcccatgatcggtagaaagtgaggaagatgcatcaggtatagttattcaagtccttcaatggagatagctccatcagaggtatagttctgtaattggtaggaaaaaaaaggagaagagcatgaattgtgtgtatggtgtatgggtaattgaatcagaaatgtagctttttggattaattttagtagagaatgccattaaagttgctgtggtctgtgcaccttaatttgcacaatgagctaaatttatctttatttcgtcttccgttacatcataagccacaaattatgtaggttcagaatcatttacagcatcaaatctctctctggatcaggtaattgctaagcattatgcatgtgcgtactttccgcatacgagtcaaaccatcacacttaagtggcatggcaagaacaggaagtggcatcccaaattttacattaggaaagatcaagttgggtacatccttcatgggcgttggatagactttgttcgtcacaaccatgtgaaagagggagatatctgcatctttcacctaaaaaattttaatgggagaaaattcagggcaacagtgcatctactccgtgaaacaattcctcactcctttggtgcactccatattcctaaaaggtttgaatcaaggaatggcagaatgaggctgaaaatgactgatgatagaagagtaagctcaactgaatgtaggagagggacaatggaaccttctacaaccaatgtcaagaaggaagcggacaatggtaatgttgtgatacattgttatttgctcttttgtgttacatgtgaaattttttgttgacgagaaaatgttacttattcagaacaatgcaacaatggtcaaggaaagcgtcaggaacctctcaattttgatgtttctgtggggagttctaagccttacttgacagcagacagagtttctctgactgaagaacagttcatgaaagtggaagagaatgttcactccattcaatctgaaggtcccatttatgtgtcgataatgaacaagagcaatgttggtaccgatgggctctacatcattgtaagtcttgcttttttctggacacacttccagtactatttagtactcccttcgttccaaaatataaggatttttaggtcattgagcaagaaccccccccccctcctatatagtactggatagaacacatcctggtaggctagtactatgaatttggacatttggacaagacttctgtcaatattcgtagtattatgataaatctcatccggtactatttgctatatgatgggggcagaagaaatgtactaaggttatgttaaaagattcctctttagtcatttcagttgtcattttttgaattttgaatgtattgctttggattaattgaagtgatatgaaccatgggaatcagtgtagaaatccttatattatggtacaaaatttgaatcgtagaaatccttatattttggaatcgagagagtacttatttattactgctacttatcaataggttgtattgtttttgttgaattaggcaagatgtctgcatctactatttcgagatgtttgtatcttgaacattcaccattcaccatccaagcaaagtctggtagttaactagagttgttcatatttatggctgtattagctagtactaacctgttgccgtaatgaacactgtaccgtatccgaaaacagacccttggcaggcagtttgctataagatacctcccggaaggggagcaaaccttgacgctcctgacgacggggacgggcaaggcatggcaggtcaagatgcgccctcggagcggcgacgcacggatgttcaccctcggctggcgcgatttcgtccgcgacaaccgtctgcaaactgaggacatctgcctcttccagctgacgaagaacagtgagagggggcttgccatgaaagtccacatcattcgtcacaacgagaggagctagtttccacagcttctagtagtagaagatcagagagatggacctctagtagcactttttcattagtggtagactggcaatgagaagagttattagcttctatttagctctttctttgtgtagctttctgctggagttgaaacctgaaaattatgggcctgtctaaataatggttaaaggagctctctactgcaatatttatccagagttggcagcttttaaacaacctcgctgatggtagttgtcctacttgcgaatttctacact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0620500, RefSeq:Os03g0620500