Os03g0633800

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Revision as of 12:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0633800| Description = Similar to IAA6 (Fragment)| Version = NM_001057249.1 GI:115454226 GeneID:4333512| Length = 1305 bp| Definition = Or...")
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Gene Name

Os03g0633800

Description

Similar to IAA6 (Fragment)

Version

NM_001057249.1 GI:115454226 GeneID:4333512

Length

1305 bp

Definition

Oryza sativa Japonica Group Os03g0633800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24972856..24974160

Sequence Coding Region

24972986..24973188,24973291..24973680,24973790..24973877

Expression

GEO Profiles:Os03g0633800

Genome Context

<gbrowseImage1> name=NC_008396:24972856..24974160 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:24972856..24974160 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagccgccgtggggtacgccgccgacagcctcatcaaggccaccgagctcaggctgggcctgcctgggacagccgacgacctgccctccacgcccaggggcaagaagcgcgccgccgcggcggaggacaacaacgccaacgccgccgccgccgacgacgacgagcacgacgccgtcgaggccgcgccgccggtagccaaggctcaagtggtcgggtggccgccggtgaggtcgtacaggaagagctgcttccagcaacagtcagcggcggcgagcaagagcaaggccgccgtgagcagctgcaacaacaaagacgagcccatcaccaagaacgcggcgccggcgccggcagcctcctcggcggcggcggccaacggcgggtcgctggtgaaggtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaagggctacagggagctccgcgaggccctggaggccatgttcgtctgcttctccggcgccgccgacggtgccaacccgtcggagttcgccatcacctaccaggacaaggacggcgacctcatgctcgtcggcgacgtccctttcgacatgttcaccagcacatgcaagaagttgaggatcatgaagagatctgaagccacagggctaggatcaccaaggcaaatgaagatctaa</cdnaseq>

Protein Sequence

<aaseq>MEAAVGYAADSLIKATELRLGLPGTADDLPSTPRGKKRAAAAED NNANAAAADDDEHDAVEAAPPVAKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSC NNKDEPITKNAAPAPAASSAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALE AMFVCFSGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGL GSPRQMKI</aaseq>

Gene Sequence

<dnaseqindica>131..333#436..825#935..1022#atctcatcacagccaacgcatcgtcttccttcttcgtcgtcgatagatcggctctcgagctcacaaccacatcgatcgtctccggcaagccgacgtacgtacgactagctagctagagaggaagcgagaaatggaagccgccgtggggtacgccgccgacagcctcatcaaggccaccgagctcaggctgggcctgcctgggacagccgacgacctgccctccacgcccaggggcaagaagcgcgccgccgcggcggaggacaacaacgccaacgccgccgccgccgacgacgacgagcacgacgccgtcgaggccgcgccgccggtagccaagtgagtagctagcttttccagagatcatctttgacttttacgatgaagctagctagggttctgagttctgacatggcgactgcctcctcctcctccctgcagggctcaagtggtcgggtggccgccggtgaggtcgtacaggaagagctgcttccagcaacagtcagcggcggcgagcaagagcaaggccgccgtgagcagctgcaacaacaaagacgagcccatcaccaagaacgcggcgccggcgccggcagcctcctcggcggcggcggccaacggcgggtcgctggtgaaggtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaagggctacagggagctccgcgaggccctggaggccatgttcgtctgcttctccggcgccgccgacggtgccaacccgtcggagttcgccatcacctaccaggacaaggacggcgacctcatgctcgtcggcgacgtccctttcgagtaagttcttcacaaacttttcatctcaacaaatctcttaattaattagtaatttgcttatatatatatttgcagtcaaactgattaaatttgctgtttgattttgcagcatgttcaccagcacatgcaagaagttgaggatcatgaagagatctgaagccacagggctaggatcaccaaggcaaatgaagatctaatctaagagcgacaagagatcgatcgatgcattccatcaacttttcatttctttttattttttttcctcccaagccaaaaaggagatgagcttgggggcatcaaagcaaacacatggatgtgcttctgctttgtttccatctttaaaaactagtaggttttaattttatgattttagcagcacaaaggagatgtggagatttgggttcaactctccatgtgtatgtacaaacgaaacagttattatatattgattgttggttactactactatactacttcaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0633800, RefSeq:Os03g0633800