Os03g0638300

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Revision as of 12:49, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0638300| Description = Tesmin/TSO1-like, CXC domain containing protein| Version = NM_001186625.1 GI:297722380 GeneID:9269021| Length = 3005...")
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Gene Name

Os03g0638300

Description

Tesmin/TSO1-like, CXC domain containing protein

Version

NM_001186625.1 GI:297722380 GeneID:9269021

Length

3005 bp

Definition

Oryza sativa Japonica Group Os03g0638300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25214779..25217783

Sequence Coding Region

25217040..25217289,25217643..25217734

Expression

GEO Profiles:Os03g0638300

Genome Context

<gbrowseImage1> name=NC_008396:25214779..25217783 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25214779..25217783 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatcatgtcgaattttgcaggcagaaatgtcaaaatgacaatgtggactcgtgcaaacgttgcagctgtaagaagtcaaaatgcttgaaactttactgcgaatgttttgcttccaaagtgtactgttcagaatcttgctcctgccgagggtgttttaatgatcatagtcatgaggaaacagttttatctactcgcaatcggattgaatctcgtaatccactagcttttgctccaaaagtaattcgcacttgtgggcctggtctggagtttggggtaagagcacattccttttgcttttcttttctgtcattattgctcataacgttctttttcatggcatag</cdnaseq>

Protein Sequence

<aaseq>NHVEFCRQKCQNDNVDSCKRCSCKKSKCLKLYCECFASKVYCSE SCSCRGCFNDHSHEETVLSTRNRIESRNPLAFAPKVIRTCGPGLEFGVRAHSFCFSFL SLLLITFFFMA</aaseq>

Gene Sequence

<dnaseqindica>495..744#50..141#gtattctaggtatatatgtctaattaaatgattactctgccaatcataaaatcatgtcgaattttgcaggcagaaatgtcaaaatgacaatgtggactcgtgcaaacgttgcagctgtaagaagtcaaaatgcttgaaactgtaaggttccttgcagttaactgttattttttatgtgcattctcttataatatccccatagaaaggtcatagggaactgtatcaaattacaatactgtaattcttgggttattccaaggtatgtttaaccacaaatgatgatcccagctgaagtctggttttaggaccaaaatacatgcatattatgcttgaattgtatgtagcttctaacttaattattaaagccgttataacattgacttggttttgaatattatcatttacagtacctcattctggatgtttgcaagtaatggttgctagatggttatatttaaagtaataaccttgcatccttgctaatacctttgcagttactgcgaatgttttgcttccaaagtgtactgttcagaatcttgctcctgccgagggtgttttaatgatcatagtcatgaggaaacagttttatctactcgcaatcggattgaatctcgtaatccactagcttttgctccaaaagtaattcgcacttgtgggcctggtctggagtttggggtaagagcacattccttttgcttttcttttctgtcattattgctcataacgttctttttcatggcataggaagactctaatgcaactcctgcttcatctcgtcataaaagaggttgcaattgcaagagatcatattgtgtgaagaaatactgtgaatgctttcaggttccaatccttgtaccagtcttatattgggcctgtttgggagagcttcttgtagcgggagattcttctagaagtaacagctgccataagctcctccaaatagtctagattttcactcatatcctaagaacccatagttgtagaaaccataaaatgaactagaagctagaaactggatttcccagcttcttcagattcttaccagctgcttctcagaattttaagctcccctaaacagggccattgataactttattgcctttcatcggtttaacatactgactatcatctgatacatattttatatctagagtggtgtggggtgctccatgagttgccgatgtgagaattgtaagaattcttttggagtaagaaaaggtgagtttgacttttccttgataattttcttaggaaggtgcaattgagcaattcataagtcactcaatttaatgtacactgcatttttctataagctctttgcttgcaatgttttattccaccgcatgggtttaggtcaaaaggagtaaatttattagctgctagttccatactgtaaaaatgacatcgctttcctaggatctttgtatggtcaaattgcaaaaggttataccatctcaagaatgtctgttcatgtgaaatccccatccaactagattaaagtactatgatcaaaatgagcaatatcatgggccgtatggttaactttctgttgggaagttcttcacccaaagaccgtggaacattgagattgccataacttggcaggtggcattgtcttatcctcattctctactaaggcatgcctgaggtcttacgcccctgaatttccagatcaatcatattaggttgctagagtatttttcatagttgcagcatctcacattgattgaattatgataaatatcagtttcaaataaagtaaatcaaagtaaaattttatcctagacgtaaattttaaaatggatcgtcaattattttgctgctgtaaccatgttttatgtgaaaatatgctacattttgctctgcctttattgcctttttagttgtccgtttttaccaattttaatgccttaatgcctttgaaggaattgaacggtttgaaaccaaggaaattgagcgagcagaccgaaaaatgaaggatcatcccaaggaagaacagtctgagatggacaaatatcatgcattatgtgaaatctggggtgttcgatccacggagaacctattcacaacaccttcaatggattctcgcaggtttgtgtacaaattgtagacattttatcatgattctcactgactcccttccaaaataccataacatacatattttgttgctgtgttctttccagagcttttgccctattcccatctgaatgccccaagagctcacttacatcatcaacaagaacttcttcccacctacattctcccacgagaacagatgttttgctatctccttttgggagctacacacaaatgcttcttgggaatgaagcatcagatatgctgctgcagcaaggggattcctcttgcaccgccagcttgaggattgcgtcacctaacaagaagagggtgtctcccctacgcaccggaaacaccttgtctccaacgtgtaggaaggaattgggtctgaagagcatcatccccccctttccttctctcactggtgatgctaacagtgagctccagtaattaacctgagttcaaatctgccacctgaggtatatctcccaatcttttttttttcatttgatgtaaaactgctagagcgattttatggtacttaagaaggtaccgccatattttcgtacatgttagtgatcgaatttccgtttgttttgaaggttccctgtttcttgttgatctcctggatcaacatagaccctgtgtgcatctattgctgacagtatcttggctgaggatttcacaaactcttaccgggacttacttttaacagtgcagagatgactaagctgcttcatatccaaagcctgatgctcagtaacttataggagtcgagcgttaatatatgaaatatagaggttctttgcactacagcttgtacatgtgctcactgacatgtgggtgcaaagggtctcaatccatatatggaaagtagttattgtatagaatcttggccacaatttactacagctacatctctatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0638300, RefSeq:Os03g0638300