Os03g0642900

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0642900| Description = Conserved hypothetical protein| Version = NM_001057285.1 GI:115454298 GeneID:4333551| Length = 2474 bp| Definition ...")
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Gene Name

Os03g0642900

Description

Conserved hypothetical protein

Version

NM_001057285.1 GI:115454298 GeneID:4333551

Length

2474 bp

Definition

Oryza sativa Japonica Group Os03g0642900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25540813..25543286

Sequence Coding Region

25540813..25540832,25540976..25541081,25541170..25541317,25541408..25541535,25542195..25542330
,25543102..25543286

Expression

GEO Profiles:Os03g0642900

Genome Context

<gbrowseImage1> name=NC_008396:25540813..25543286 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25540813..25543286 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcctcccgccggagacgctgctctgccgccgccgccgccgtcgtcgtcggtcatcttcctgggcaccggctgctccggcgcgctccccgacacgcggtgcctcctcaggccgtccgcgccgccgtgcgccgtctgctccctgggcgtctcgctcccaccggagcaaaaccccaattacaggtgtaacacctccctcttgatagattactgccaagacgatggaacccacgagtacattataatcgatgtcggcaagacctttagagaacaggttctccggtggtttgttcatcacaagattccttgggttaactcgattattctcactcatgagcacgcggatgctgtcttaggtcttgacgacgtttggatggttcaaccaaagggttgcagcaatgatttccgccgagttccgatttttcttacccaattcacaatggacagtgttgtagcaaggttcccctacttactgaaaaataagctagaggaaggtgacgaagtttcccaagtcgctcaactcgattggaggataattgagggtgatattgacaagccatttgtatcatcagggctagagtttgtgcctttgcctgtcatgcatggagagggtaatatttgtttaggcttcctatttgggaggaaagcaaaaattgcatatttatctgacgtctcaagatttctacctgaaactgagtatggttgtttggattattgctaa</cdnaseq>

Protein Sequence

<aaseq>MEPPAGDAALPPPPPSSSVIFLGTGCSGALPDTRCLLRPSAPPC AVCSLGVSLPPEQNPNYRCNTSLLIDYCQDDGTHEYIIIDVGKTFREQVLRWFVHHKI PWVNSIILTHEHADAVLGLDDVWMVQPKGCSNDFRRVPIFLTQFTMDSVVARFPYLLK NKLEEGDEVSQVAQLDWRIIEGDIDKPFVSSGLEFVPLPVMHGEGNICLGFLFGRKAK IAYLSDVSRFLPETEYGCLDYC</aaseq>

Gene Sequence

<dnaseqindica>2455..2474#2206..2311#1970..2117#1752..1879#957..1092#1..185#atggagcctcccgccggagacgctgctctgccgccgccgccgccgtcgtcgtcggtcatcttcctgggcaccggctgctccggcgcgctccccgacacgcggtgcctcctcaggccgtccgcgccgccgtgcgccgtctgctccctgggcgtctcgctcccaccggagcaaaaccccaattacaggtgcgcttgcagtcaatatcctgtggccttcaaaatatatatcgaccagcctgattcagagcatctcctagtgctactgtaacctgtcctgccctttaaggccccgtttgaatcaaagaaaaaccatacgaattctagaggattttatcctataagaaataattctatagagtcctttgaaacaaaggattgtttcctatcaattcctttgaaattcctatggaatgaaccttactagagcaattttagaggaaaataagcatgactctcacctcatgttttcctctttatgtgtcaaggttccagcgtttttcctgtgtgctaatcaaacgacagtttgaagactttcttgtgtttcaaaatctcataggaatccaataagtgtggcattcaattcctatgtttttcctatttctctgttttctcaatcatgcgattcaaaggggctctaagcctttaacccgtctctgttttaagtgtcaatttctcattgttacgctgtcctacataactgaatgcagttatctttaggaaatctgtatcaatccagtaatgctgttggtatgacttcaaagattattattttttagataatgggcagcgcgcggcctctgcatcataaggtgaatgcacacggccaaatgacttcaaagatgctttcaaactagttactgtatcaagaaggacgaaataaaattgcattttttagagtcaccatgatgctaaacaaagccttaatgtgggggagctgaacgttctgttctctttcaggtgtaacacctccctcttgatagattactgccaagacgatggaacccacgagtacattataatcgatgtcggcaagacctttagagaacaggttctccggtggtttgttcatcacaagattccttgggttaactcggtgagatctccagtactgcactgtccattttttttcagtttattttcttttgggtgaactggtacatagaaattgatctatcatcgatgtggattttcatccctttagggaacatctcctcgttgtttgcatgccactttaatagtcataaaaaaattgacaaaaattgacaacatagactaatatgaaatatatcacttcacaaacatgcaagttaaattcaacttctataagttgcaacaaaaagaacaaattaaattgaaaatagttatcgtacattcacagctatatttgttatttttgttacagcttgtagaagttgattttaaacttgcatgtttatagagtgatatatttcatattaatctatgttgccaaatttttttaaaaaattttgatacctatttaggtggcatgcacgaaacgataggatatcccctcgagtaatgaaatcactttccgatctattatggatgtggattttcatcccctcgaggggacatcccctaatttggcggagtttggtaatcaacagacggcgtccttctctctcctctttctcttgcctcccacatcatagaaattcctacatggcattctctcttagatggtgaagtcacaccattgttgatgccctaataaggtcatgtgcggtgcagattattctcactcatgagcacgcggatgctgtcttaggtcttgacgacgtttggatggttcaaccaaagggttgcagcaatgatttccgccgagttccgatttttcttacccaattcacaatggacaggtcactctatcacaactagacatataacagatgtcatattggttatcattaccatgtattaccttgtaacatcggccactatttttacagtgttgtagcaaggttcccctacttactgaaaaataagctagaggaaggtgacgaagtttcccaagtcgctcaactcgattggaggataattgagggtgatattgacaagccatttgtatcatcagggctagagtttgtgcctttgcctgtgagagccactgttgttaatttgaagtgctgctttggtttctcctttttctctttgaagtcgctaactttgctatttttgttttcaggtcatgcatggagagggtaatatttgtttaggcttcctatttgggaggaaagcaaaaattgcatatttatctgacgtctcaagatttctacctgaaactgagtatggtatgatttttctgccaacaatagtttatcttcaaatatatgcttgacagaaatgatattttatcgaactaatgttcaaagtcatggttatttctgagatcattatgatatatatgaatgctgaaaatcaaaataatctgcaggttgtttggattattgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0642900, RefSeq:Os03g0642900