Os03g0644100

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0644100| Description = Protein prenyltransferase domain containing protein| Version = NM_001186633.1 GI:297722396 GeneID:9269748| Length = ...")
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Gene Name

Os03g0644100

Description

Protein prenyltransferase domain containing protein

Version

NM_001186633.1 GI:297722396 GeneID:9269748

Length

2280 bp

Definition

Oryza sativa Japonica Group Os03g0644100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25603645..25605924

Sequence Coding Region

25603797..25605647

Expression

GEO Profiles:Os03g0644100

Genome Context

<gbrowseImage1> name=NC_008396:25603645..25605924 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25603645..25605924 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgttctgctgccctgcttctcctccccctccaatccaagcttcttctctcccgccgttccggacgaacagcttgtctccgaccgtacgtggcgggaatgccgcgccacgacgccctctcgcgcggtctttctcggccaagaaccggtccccgcgagcgcggaaccgccacgcggcagcaggtgatggtggtggttatgggtctccggagcaagaggggcgtggggaatcgtccctcccgaacgccgaggcgctcgcgtcctcgctgcgtgattgcggcggcgcggacggcgtccggcgggtgcacgcggttgctgtccggtcgctcgacagcctggggacgttcgtcgccaacaatttgatcagcgcgtatgccaggttcgacgaggtttcggatgccagggaggtgttcgacgaaatgccggagaggagtgttgtgtcgtggacggcgatgatgaatgtgtatctgaaactaggacactacggcgaggttgtgaggctcttctttgatatggtgggaagcggagtgcaaggtaacagcttgacttttgtttgcttgctgaaatcatgcggcgagcgttgcgatgctaagctagggcagcaggtccactgttgtattgtcaaaggtgggtggagcaatgtgatagtggacagtgctattgcacacttctatgctcaatgcggtgatgttgctagtgcttcagccatatttgataagatggcctatcgtgatgtcatctcatggacaacaatgatcacagcttatgtgcagcatgggcatgggggccaagctcttagaatgttttcagaaatggtgtcagaaggatttcgaccaaatgagttcactgtgtgcagtgtcctcaaggcttgtgcagaagagaaagctgtgagatttgggaagcagctgcattgtgctgttttgaagaaaatgtacaaaaatgacatccatatcggcagtgcccttgtcaccatgtatgctagatgcggtgaagtttttgatgctcaggcagtgtttgatatgatgccacgaagaaacactattacatggacttctatgatctctggctatgcacaaagtggccatggagaaaaggctatcttgttgttcagaaagatgaagatgcgccgagtatttgttaacaacctcaccattgttggtctcctaagtgcctgtggctccttacagtcgccttatcttggaaaggaattgcatgctcagataataaagaattctatggaagaaaatcttcaaattgggagtacacttgtttggttctactgtaaatgtggagagtacacatatgctgcaagaattcttgaagcgatgcctgaccgtgatgctatctcatggactgctctgatttccggctacaataatctaggtcataatgttgaagcacttaaatcattagatgatatgctatgggatggtgtaaaaccaaatacatacacttactcctcggctctgaaagcttgtgcaaaattggaggctctgcaatatggaaggaagatccatggttttgttaacaagactcaagatttctccaatgtgtttgtgggaagctcacttatcgatatgtacatgaggtgtggaaaagtcgacgaagcccgaagtgtctttgatgccatgccagaacataaccttgtgacatggaaagtgattattacaggatttgctcagaatggcctctgtgaagaggctttgaagtacatgtacctaatgcaacaagaagggcatgaggttgatgattttgtgctctcaacagttctgacatcatgtggagatcttcaatggaaatccatctccttctctgactcagttgctggttcagtttcagctaggcagtag</cdnaseq>

Protein Sequence

<aaseq>MLFCCPASPPPPIQASSLPPFRTNSLSPTVRGGNAAPRRPLARS FSAKNRSPRARNRHAAAGDGGGYGSPEQEGRGESSLPNAEALASSLRDCGGADGVRRV HAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVFDEMPERSVVSWTAMMNVYLKLG HYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGWSNVIVD SAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGHGGQALRMFSEMVSEG FRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFD AQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMKMRRVFVNNLTIVGLLSAC GSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAIS WTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGF VNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNGLCE EALKYMYLMQQEGHEVDDFVLSTVLTSCGDLQWKSISFSDSVAGSVSARQ</aaseq>

Gene Sequence

<dnaseqindica>278..2128#gagctcacaaaaatcgctcgcccccctccacctccacctcgctcccgccgcctccaccacccatctccgccctcgtccgctcgccggcaagccgctgctgctgcagctgcttgctcgtctcgtctccccatccctgggcggggcgcggtgggaggggggcgggggactcgccaccgctctccgttccgtgggtgtctctgcactctgctttgctcctcttcttccccccctctggttccacccccgcgcggcggagcgcgggggaagggatccacagatgctgttctgctgccctgcttctcctccccctccaatccaagcttcttctctcccgccgttccggacgaacagcttgtctccgaccgtacgtggcgggaatgccgcgccacgacgccctctcgcgcggtctttctcggccaagaaccggtccccgcgagcgcggaaccgccacgcggcagcaggtgatggtggtggttatgggtctccggagcaagaggggcgtggggaatcgtccctcccgaacgccgaggcgctcgcgtcctcgctgcgtgattgcggcggcgcggacggcgtccggcgggtgcacgcggttgctgtccggtcgctcgacagcctggggacgttcgtcgccaacaatttgatcagcgcgtatgccaggttcgacgaggtttcggatgccagggaggtgttcgacgaaatgccggagaggagtgttgtgtcgtggacggcgatgatgaatgtgtatctgaaactaggacactacggcgaggttgtgaggctcttctttgatatggtgggaagcggagtgcaaggtaacagcttgacttttgtttgcttgctgaaatcatgcggcgagcgttgcgatgctaagctagggcagcaggtccactgttgtattgtcaaaggtgggtggagcaatgtgatagtggacagtgctattgcacacttctatgctcaatgcggtgatgttgctagtgcttcagccatatttgataagatggcctatcgtgatgtcatctcatggacaacaatgatcacagcttatgtgcagcatgggcatgggggccaagctcttagaatgttttcagaaatggtgtcagaaggatttcgaccaaatgagttcactgtgtgcagtgtcctcaaggcttgtgcagaagagaaagctgtgagatttgggaagcagctgcattgtgctgttttgaagaaaatgtacaaaaatgacatccatatcggcagtgcccttgtcaccatgtatgctagatgcggtgaagtttttgatgctcaggcagtgtttgatatgatgccacgaagaaacactattacatggacttctatgatctctggctatgcacaaagtggccatggagaaaaggctatcttgttgttcagaaagatgaagatgcgccgagtatttgttaacaacctcaccattgttggtctcctaagtgcctgtggctccttacagtcgccttatcttggaaaggaattgcatgctcagataataaagaattctatggaagaaaatcttcaaattgggagtacacttgtttggttctactgtaaatgtggagagtacacatatgctgcaagaattcttgaagcgatgcctgaccgtgatgctatctcatggactgctctgatttccggctacaataatctaggtcataatgttgaagcacttaaatcattagatgatatgctatgggatggtgtaaaaccaaatacatacacttactcctcggctctgaaagcttgtgcaaaattggaggctctgcaatatggaaggaagatccatggttttgttaacaagactcaagatttctccaatgtgtttgtgggaagctcacttatcgatatgtacatgaggtgtggaaaagtcgacgaagcccgaagtgtctttgatgccatgccagaacataaccttgtgacatggaaagtgattattacaggatttgctcagaatggcctctgtgaagaggctttgaagtacatgtacctaatgcaacaagaagggcatgaggttgatgattttgtgctctcaacagttctgacatcatgtggagatcttcaatggaaatccatctccttctctgactcagttgctggttcagtttcagctaggcagtagattagttctcccgtggcaaagaagctagcacttctgtacagttacagagatttgttattgtgcaagatcagaagacatgtagcacaaaaaggtaactcaaggagtgcatacgtgtatatgtacttttaagagtaccactaccttcactaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0644100, RefSeq:Os03g0644100