Os03g0647500

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0647500| Description = Conserved hypothetical protein| Version = NM_001057308.1 GI:115454344 GeneID:4333574| Length = 3684 bp| Definition ...")
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Gene Name

Os03g0647500

Description

Conserved hypothetical protein

Version

NM_001057308.1 GI:115454344 GeneID:4333574

Length

3684 bp

Definition

Oryza sativa Japonica Group Os03g0647500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25823410..25827093

Sequence Coding Region

25823936..25824004,25824612..25824774,25824873..25824952,25825584..25825640,25825958..25826051
,25826404..25826490,25826579..25826668,25826779..25827065

Expression

GEO Profiles:Os03g0647500

Genome Context

<gbrowseImage1> name=NC_008396:25823410..25827093 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25823410..25827093 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggcggcggcggcggcggcgggaggaaggaccgcggcgaggggctcggccgcgcgctgacccggcagcggaacaaggccgcggcggcggccaaggagaggggccacgcgctcgccctcgcccgccgcgcgcgccagccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtgctccagcgcgccgcagaggaatacctcctcctcggtggtggtggcggcgacggtgccggcgacgtcgccctctccgcctcgctcggctccgggcttatcgatctggatgggacggtggagacggaggaggagaggcggtggctgcgggaggagcaggaggcccttcacgcgggcagcctcaaggtgccccgccgaccgccatggactccccagatgacggtggaggagctcgacgccaacgagaagcgggccttcctggagtggcggaggaacctcgcaagattggaagagaacgaaaaacttgtccttaccccttttgagaagaacattgatatctggagacagctctggagagtacttgaacgcagtgatctgctggtcatggtagttgatgctcgagatcccttgttctaccgctgccctgatcttgaggtatacgcacaggaaattgatgagcacaagagaacactgcttcttgtaaacaaggctgatcttttaccactgaatgtcagacagagatgggcagaatactttaagcaacacgatatcctttatctgttctggtctgccaaagctgctactgctgatttagagggaaagaagttgagcagctattccatggaaaactggaatacagcagatcttgacaccaagatatatggccgggatgaactcctggtgatacagattctgaaactgacccagaggaaaccactgaccttgaaggctcagatactgcagtag</cdnaseq>

Protein Sequence

<aaseq>MGGGGGGGGRKDRGEGLGRALTRQRNKAAAAAKERGHALALARR ARQPLESVIEVSDIDAVLQRAAEEYLLLGGGGGDGAGDVALSASLGSGLIDLDGTVET EEERRWLREEQEALHAGSLKVPRRPPWTPQMTVEELDANEKRAFLEWRRNLARLEENE KLVLTPFEKNIDIWRQLWRVLERSDLLVMVVDARDPLFYRCPDLEVYAQEIDEHKRTL LLVNKADLLPLNVRQRWAEYFKQHDILYLFWSAKAATADLEGKKLSSYSMENWNTADL DTKIYGRDELLVIQILKLTQRKPLTLKAQILQ</aaseq>

Gene Sequence

<dnaseqindica>3090..3158#2320..2482#2142..2221#1454..1510#1043..1136#604..690#426..515#29..315#acttcgccgccacgccgtgcaggtggagatgggaggcggcggcggcggcggcgggaggaaggaccgcggcgaggggctcggccgcgcgctgacccggcagcggaacaaggccgcggcggcggccaaggagaggggccacgcgctcgccctcgcccgccgcgcgcgccagccgctcgagtccgtcatcgaggtcagcgacatcgacgccgtgctccagcgcgccgcagaggaatacctcctcctcggtggtggtggcggcgacggtgccggcgacgtcgccctctccgcctcgctcggctccgggcttatcgatctgtaacatcttaaacgaactttttttgttgggtatcctaagtgttcgacgaaatgtctctgaagcgggttgctcattcgggcgcgggcgcgggcgctcctttgcgatgcagggatgggacggtggagacggaggaggagaggcggtggctgcgggaggagcaggaggcccttcacgcgggcagcctcaaggtgccccgccggtgggtgctcaacagcgcttctctttcttctcgtcttctaaattttgggtcagtgatgtataggtggatgtgatgttctcgatttcagaccgccatggactccccagatgacggtggaggagctcgacgccaacgagaagcgggccttcctggagtggcggaggaacctcgcaaggttggtcaggtttcattggttattatgctgattcttgtatgtcttccaatgtttgttgtgtttatgtgccaaaaaaaataatatttggacagctacttatgcttggttatgaaaatttgggatggattcctttctacttctttaatttagatattacactggcaacaagtgaaatgttggcctgtatctaattgtgtacaatatatcctttttccttcttggactaagaaaagttgaaactcgtatcttgaatgtgtgcgcagtgagcttctggtgcatcaaagtcaagcatgatgttgcctatcgttctgtttatttttatataccaaaagattctttttttctcctgcagattggaagagaacgaaaaacttgtccttaccccttttgagaagaacattgatatctggagacagctctggagagtacttgaacgcagtgatctggtgagtgcgtatgcatgagaagactatgttacagttcaaatatggacacgttactactttaccacatttcatcatatatcttttttcaacattaaaacttgttccctattcaattgtggcctatttgaaatttctgagttgcttagcagctaacagcataacaaatgtatcctgtagttatattatagtctgttttattcattatcctagtagcttttaattttctgtccaactgtatgttgcttatctttgaatgagctgacagttctggaaattatgtggaagtgcttgacttctgttttccttctttcttgaagctggtcatggtagttgatgctcgagatcccttgttctaccgctgccctgatcttgaggtacttattcccaagattccagtatttttcttttgactactctttttgggtttaagataaacttttagatgattggtaatttacatatccagcctcttgcaagttgcaactactgattataaccttattacattctatggttatctggaagcattagctgaatgcccatttaccatgaaaatttcaggcacttgaatattaaaaccacgatattggatatacagcatattcagtagtcccacatctcgttgcattcattcctagacacgttagtgtttaagattttaagttgctcaggcactggcaaatcacaaaggcacaacctgacgggcgcgatgatacaactgtaaattcagtttaccttcatatcgcagatgttgtcctgtttgatttctttgttttattgtctgccaacagcataatgcttaaatacttccttgcgtgtgtttctgtgctgatagcatgtggtgctagggttagtgtaattcattagtttctggtgttccctctttgtgataaatatgatttgtaataatagcatagaagagatataactgtgtaagctttcactattgtgtggatctttgcagttttgtgttgtcttctgacatgtctttatgtatgttgtaaggtatacgcacaggaaattgatgagcacaagagaacactgcttcttgtaaacaaggctgatcttttaccactgaatgtcaggttagtaacaccacacaagcgcatttttcaatattctaaatgcctttagtgtctgcgatgatccatacagtaatttctcattgaaaaaaaaattgcagacagagatgggcagaatactttaagcaacacgatatcctttatctgttctggtctgccaaagctgctactgctgatttagagggaaagaagttgagcagctattccatggaaaactggaatacagcagatcttgacaccaagatatatggccgggatgaactcttggtgagattgcagggtgaagctgagtatattgtgaaccaaaagggagcattaagagctgaagagggtcatgaatctagtcgttcagattctgtctcaacacgacccaagcatgtggttgttggatttgtaggctatccaaatgttgggaagagttcaaccatcaatgctttggtaggccagaagagaactggtgtaacctctacacctggcaagaccaagcattttcagacattggtaatctcagaagaactcattctctgtgattgtccaggtctggtcttcccttccttttcaagctcaaggcatgagatggtagcctgtggtgtcttgccaattgataggatgacaaagcataggggcgctattcaagtggtggcaaatcgtgtgccaagaaatgttctagaacagatttataaaatcaccctgccaaagcccaaggcatatgaacaactgtcccgaccaccaactgccgctgagttgctgcgggcgtactgcacatctcgagggcatgtcagtcatgctgggctgcctgatgagactagggctgctagacagattctgaaggattacttagatggaaagatcccacactttgagcttccccctggtgatacagattctgaaactgacccagaggaaaccactgaccttgaaggctcagatactgcagtaggtgccacagcagatcattgtgcttctgatgaacaagatgaggaaatcagtcaagctgatccaaacattagtcatgtactaagtgaccttgaatctttcgacctggccagtgaagtgtccaagaactctacaaagaagaagaaagaggcatcctataagcatcacaagaaaccccagaggaagaaggatcgttcatggagggttggaaatgatggcgctgatggatctgctgttgttcgggtgttccagaaacctgccgtcaattttgctaccgttacaggttaatgtttttttgcggcactctgtgcgacttcattctcttttttagcttacggtaattgaagatgtcgttgaaagtcaaactacattttatccattttgtttcatcttctgctgtttgttatggccatctgtaattctgtattggaaatttggaatggtacgcaatgtggctatttttcgatgctagctttcatagcatttgactgaaaggatgaaaccttatgaatgttctattaggttatgaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0647500, RefSeq:Os03g0647500