Os03g0648400

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0648400| Description = Similar to DnaJ protein homolog (DNAJ-1)| Version = NM_001057314.1 GI:115454356 GeneID:4333580| Length = 3719 bp| D...")
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Gene Name

Os03g0648400

Description

Similar to DnaJ protein homolog (DNAJ-1)

Version

NM_001057314.1 GI:115454356 GeneID:4333580

Length

3719 bp

Definition

Oryza sativa Japonica Group Os03g0648400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25887567..25891285

Sequence Coding Region

25887727..25887876,25889428..25889590,25889697..25889838,25889919..25890195,25890278..25890476
,25890560..25890882

Expression

GEO Profiles:Os03g0648400

Genome Context

<gbrowseImage1> name=NC_008396:25887567..25891285 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25887567..25891285 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcgggcgcgcgccgaagaagagcgacaacaccaagtactacgagatcctgggggtccccaagaccgcctcccaggacgacctcaagaaggcgtaccgcaaggccgccatcaagaaccaccccgacaagggcggcgaccccgagaagttcaaggagcttgcacaagcttatgaggtattgagtgacccggagaaacgtgaaatctatgaccaatatggtgaagatgccctcaaggaaggaatgggtggaggcggatcccatgttgatccatttgacatcttttcatcattctttggaccttcttttggtggtggtggcagcagcaggggcagaaggcaaaggaggggagaggatgtgatccatccgcttaaggtttctctagaagatctttacaatggtacttcaaagaagctctctctttcccgcaatgtcctctgcgccaagtgcaagggcaagggttccaagtctggtgcttccatgaggtgcccaggttgccaggggtctggcatgaaaatcaccatccgccagctggggccttccatgatacagcagatgcagcagccttgcaatgagtgtaaggggactggagagagcattaatgagaaggatcgctgcccaggctgcaagggcgagaaggttattcaggagaagaaggttctggaggttcacgttgagaaggggatgcaacacaatcagaagatcactttccctggtgaagctgatgaggcgcctgataccgttacgggagacattgtattcgtcctccagcagaaggaccactccaagttcaaaaggaagggcgatgatctcttttatgagcacaccttatctctgactgaagcactttgtggtttccaatttgtcctgacacatctggacaacagacagctgctcattaagtcaaaccccggtgaagttgttaagcctgaccaattcaaggcaataaacgatgagggaatgccaatgtaccagaggcctttcatgaaggggaagctctacattcatttcacggtggagttccctgattccctggcgcctgaacaatgcaaggctctcgaggctgtgcttccaccgaagcctgcatcccagctgacagaaatggagatagatgaatgcgaggagaccacgatgcacgatgtcaacaacattgaggaagagatgcgcaggaaagcccaagctgctcaggaggcgtatgatgaggacgatgagatgcctggaggtgcccagagagttcagtgcgcgcaacagtaa</cdnaseq>

Protein Sequence

<aaseq>MFGRAPKKSDNTKYYEILGVPKTASQDDLKKAYRKAAIKNHPDK GGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGSHVDPFDIFSSFFGPS FGGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVLCAKCKGKGSKSGAS MRCPGCQGSGMKITIRQLGPSMIQQMQQPCNECKGTGESINEKDRCPGCKGEKVIQEK KVLEVHVEKGMQHNQKITFPGEADEAPDTVTGDIVFVLQQKDHSKFKRKGDDLFYEHT LSLTEALCGFQFVLTHLDNRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMKGKLY IHFTVEFPDSLAPEQCKALEAVLPPKPASQLTEMEIDECEETTMHDVNNIEEEMRRKA QAAQEAYDEDDEMPGGAQRVQCAQQ</aaseq>

Gene Sequence

<dnaseqindica>161..310#1862..2024#2131..2272#2353..2629#2712..2910#2994..3316#tctttctctcctcccactccgctagctccggccaccaactttgacccgtcctcctcctccgcatcccccatcccctcctccccggcggcggcggcggcgcggaggcggcggcacgggagcggctagtggtttcgtcggcggaggcggaggcggggccaagatgttcgggcgcgcgccgaagaagagcgacaacaccaagtactacgagatcctgggggtccccaagaccgcctcccaggacgacctcaagaaggcgtaccgcaaggccgccatcaagaaccaccccgacaagggcggcgaccccgagaaggtccgagcccgatcccgatcccccaccctcctcctccgttctaccggatctcagggccgcttgctccctttctcgatccgacgcgatctggttcgatcccgtcccgtcgcggatgatggatcggggggcgggcggaacatcatctcgttttgttactttaggcctggtaggatttgcagtctgcggttcatgtggggggaatttgggcggcgagcgggcgggcgatcaaagatttgctcggttttacttgttgctgagggggtgggttagtgtgaattgtgaatttgtgatgcgatcatggccatgatcttgggggtttgtggggggaacaatagactggattcgtaacatcaagtagactgtgcagattcttctgctacaatagaaccaatagaggagaccactgaaacagcgatccgtgcgatctttaagtgctttcagaattcagatgttcgttttcccaagttttatgcgctagttacttcccaagaattttccgctgcgcttgaggtttgctggatcatttttaatttgcgttgtggttatctatcaagatcattagctagctgaaatggacttacaaagtctgtttgtgttcagatagtattcattttcagagaaccatctagctcattgctgggttgtaatcttatactgacaccgtaagatatttcattgttctcattctgccatacctcagcgaagcatctatagctgtgaaatgccccattgaatctagctcattgctgggttgtattgttatactgaccctgtaagatatttcgttgttctcattctgcctcagcgaagcatctttagctgtgaaatgctccattgattgcatctttaattctcgcatcggataacatcttgagtaacggctgtactggaatgtttaaaactggtagcattagggcattgttcttcaggcaaagtatcctttggtgatcataggactactcattctagctgtgattcaaatccacttgctaattaattgtttaggaaaagcgcttgtttgggtagtccggtaatgtgactttcaattaaatgtttctatatgttgggagtattttgtctgtttaaatcctattagattttgctctgcccctttatgtttagcactgtatcttacatgatgaaatattgtttttaattcttatgctccttatcataatacttctgagttcgatacttcctccgtttcacaatgtaagagtttctagcattgcccgcattcatttagatgttaatgaacctagacatgtgtatgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattgtgaaacggagggagtataaattttgttactgcatattggagtcaacaaatgcttattgtcttattgaatgcgacatggaatggcgaatatagcatatatccatatagtgatcacaactatatttccttttgtttactgctttttcagtcatccatgtattcataatctgtagaatgaaagaggctaattttaggcatatctttgttttaattttatctcagttcaaggagcttgcacaagcttatgaggtattgagtgacccggagaaacgtgaaatctatgaccaatatggtgaagatgccctcaaggaaggaatgggtggaggcggatcccatgttgatccatttgacatcttttcatcattctttggaccttcttttggtggtattttttgaagacaatacattttcctgtgtgattgtgttgaactctgttaatctcttgttttgttgatgtaatgaaatttcgtttgtttatgttttgagcacaggtggtggcagcagcaggggcagaaggcaaaggaggggagaggatgtgatccatccgcttaaggtttctctagaagatctttacaatggtacttcaaagaagctctctctttcccgcaatgtcctctgcgccaagtgcaaggggtaagtctggtttgccctagcatagtaaactatgcattttcacaatcctgctcttgaacattactccctgttcatttcagcaagggttccaagtctggtgcttccatgaggtgcccaggttgccaggggtctggcatgaaaatcaccatccgccagctggggccttccatgatacagcagatgcagcagccttgcaatgagtgtaaggggactggagagagcattaatgagaaggatcgctgcccaggctgcaagggcgagaaggttattcaggagaagaaggttctggaggttcacgttgagaaggggatgcaacacaatcagaagatcactttccctggtgaagctgatgaggcggtatgattgtttcatctattagggtagtttctatagattgactcaatgaccagaactatattgaagaatgttttacttgcagcctgataccgttacgggagacattgtattcgtcctccagcagaaggaccactccaagttcaaaaggaagggcgatgatctcttttatgagcacaccttatctctgactgaagcactttgtggtttccaatttgtcctgacacatctggacaacagacagctgctcattaagtcaaaccccggtgaagttgttaagcctggtaagaccttgtagatgttaagagcaatgtagtatttatgcaactgtacttgtcggtaatccttgtctcatatatttgagcagaccaattcaaggcaataaacgatgagggaatgccaatgtaccagaggcctttcatgaaggggaagctctacattcatttcacggtggagttccctgattccctggcgcctgaacaatgcaaggctctcgaggctgtgcttccaccgaagcctgcatcccagctgacagaaatggagatagatgaatgcgaggagaccacgatgcacgatgtcaacaacattgaggaagagatgcgcaggaaagcccaagctgctcaggaggcgtatgatgaggacgatgagatgcctggaggtgcccagagagttcagtgcgcgcaacagtaagcagagtatgtcatctaggaaactcgtcattggttcacaaatcaacgtcgtcgcaaaggtttgccgtaaatttttggacccaaagatgattgtgctctgtttcccgttgcggcgaacatgaagatagtgaagctgattttacaccccttaagccgggactgtatcccttttgtttgcgacttaaaaaatgctactcgtatctagtaatagctggctacgttttactatgctgtgagactcgtagagttttacctcctaaaaagaaactcggtatgttgtgaatgctacaactgacactgcaccgtgtgcagtggctcaacattttttgtggtcagatggctatgcttgcaccgtgagactcgtagagttgtgcatctaaatatgcatttcttcctttgctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0648400, RefSeq:Os03g0648400