Os03g0656800

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Revision as of 12:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0656800| Description = Similar to 3-glucanase| Version = NM_001057345.1 GI:115454418 GeneID:4333617| Length = 2868 bp| Definition = Oryza ...")
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Gene Name

Os03g0656800

Description

Similar to 3-glucanase

Version

NM_001057345.1 GI:115454418 GeneID:4333617

Length

2868 bp

Definition

Oryza sativa Japonica Group Os03g0656800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26384511..26387378

Sequence Coding Region

26384594..26384934,26385993..26387130

Expression

GEO Profiles:Os03g0656800

Genome Context

<gbrowseImage1> name=NC_008396:26384511..26387378 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26384511..26387378 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagccgctctggtgatcggaggctggccgtggttgcgttcgcggcggcggtgttgctgtcggcggcggaggggctcggggtgaactggggcacgatggcgtcgcacccgctgccgccgagggcggtggtgcggatgctgcaggacaatgggatcagcaaggtgaagctgttcgacgccgacgccgggacgatggaggcgctcgccggcagcggcgtcgaggtgatggtggccatcccaaacaacctgctcgacctgctgacggactacgacgcggccagggactgggtgcacgagaacgtcagccgttacagcttcgacggcggcgtcaatatcaaatatgttgccgtcgggaacgagccattcctgtcgtctttgaatggcacgttcctgaacgtgaccttccctgctctgcagaacatccagcgagccctctacgacgccggccacggcgacaccatcaaggccaccgtgccgctgaacgccgacgtgtacaactcgccggagaacatgcaggtgccgtcggcggggaggttccggccggacatcgccgggctgatgacggagatcgtgcagttcctgaaccagagcggcgcgcccttcaccgtcaacatctaccccttcctgagcctgtacggcaacgacaacttcccgctcgactacgccttcttcgacggcacgaccagccccgtcgtcgacaccaacggcatccagtacaccaacgtgttcgacgccaacttcgacacgctcgtgtcggcgctggtcgccgccggcgtcgggggcctccccgtcgtcgtcggcgaggtcgggtggccaaccgacggcgacaagcacgccagggcggacctcgcgcagcggttctacgccgggctgctccggaagctggcgtccaacgccgggacgccgctgcggccgaaccagtacgtggaggtgtacctgttcagcctcgtcgacgaggacgccaagagcgtggcgccgggcaacttcgagcgccactggggcatcctccggtacgacggccagcccaagtactccatggacctcgcagggcagggccgggacacggcgctcgtggcggcgcgcggcgtcgcctacctcccgcgcgcgtggtgcgtgctcaacccgagcgccacgccggacgccatgagcagggtcggcgacaacgtcaactacgcctgcacgtacgccgactgcacctcgctgggctacggctcgacgtgcaacggcatggacgccgccggcaacgcctcctacgccttcaacgcctacttccaggtgcagaaccaggtggaggagtcgtgcggtttccagggcctcgccgtgcagacgcagcaggacccgtccacgaacgcctgcaacttcaccatacagatcgagccgtctgcggccgccggccgacggccggcggcggtggccgtgacggtggcgacggccatgctgatctcggttctcgccgccatggtcacgacgccctga</cdnaseq>

Protein Sequence

<aaseq>MASRSGDRRLAVVAFAAAVLLSAAEGLGVNWGTMASHPLPPRAV VRMLQDNGISKVKLFDADAGTMEALAGSGVEVMVAIPNNLLDLLTDYDAARDWVHENV SRYSFDGGVNIKYVAVGNEPFLSSLNGTFLNVTFPALQNIQRALYDAGHGDTIKATVP LNADVYNSPENMQVPSAGRFRPDIAGLMTEIVQFLNQSGAPFTVNIYPFLSLYGNDNF PLDYAFFDGTTSPVVDTNGIQYTNVFDANFDTLVSALVAAGVGGLPVVVGEVGWPTDG DKHARADLAQRFYAGLLRKLASNAGTPLRPNQYVEVYLFSLVDEDAKSVAPGNFERHW GILRYDGQPKYSMDLAGQGRDTALVAARGVAYLPRAWCVLNPSATPDAMSRVGDNVNY ACTYADCTSLGYGSTCNGMDAAGNASYAFNAYFQVQNQVEESCGFQGLAVQTQQDPST NACNFTIQIEPSAAAGRRPAAVAVTVATAMLISVLAAMVTTP</aaseq>

Gene Sequence

<dnaseqindica>84..424#1483..2620#cccatcactcgattcgcgctctagctctagcttttctctcttctttcttgggctggctatctatagcttgctcgctgtcgatcatggcgagccgctctggtgatcggaggctggccgtggttgcgttcgcggcggcggtgttgctgtcggcggcggaggggctcggggtgaactggggcacgatggcgtcgcacccgctgccgccgagggcggtggtgcggatgctgcaggacaatgggatcagcaaggtgaagctgttcgacgccgacgccgggacgatggaggcgctcgccggcagcggcgtcgaggtgatggtggccatcccaaacaacctgctcgacctgctgacggactacgacgcggccagggactgggtgcacgagaacgtcagccgttacagcttcgacggcggcgtcaatatcaagtgagtccacgcaccacagctgcatgatgccaccatgatcatctcctccatccatggttcagatattgagatgctctgcatggtgcaatcctcttttttttttcttttaaagaaaaaaaaatccttcttacattcagctgttgcttcttcaggtgtcacatattagttgtagctgtcagaattcgataggatttggattgatgtgttgctctttttcaaaatagttattgagtttttattctgattatgattatgacatacttatatgtgcatattaattatctttgcctcgtgcataattggtcatggttctggttctattatgcattaattccaaagtccttttgagctgatcttgaataatgctctggagtagtttttgaagtgattgattactatggggtgacgtggatattctgctggctgattcggagaagctttctgatcagtaaagtggcaaccttaacatcaacaagttgaaagttaaaattatgcatatgcgtcgcatttgtccaattgttccgtccaaactctgtctgaagaatatagtagtactcttttaggcattatctgatactatattttcttcgtctaaaaaaccaacttttaaggataatcatctttagaagttgatttttatttgggatcgaggatgtattaggtgtttagatattgacaaaagatctgaatatgatgtgtcatcagtactagcgatcctacaaggatcatccctctgaattctagtctacaaaaaaaaaaaagctatcttgaagtagggcacttaatctaattttagtggccatcggtactttgtaggcatgcgctagatgactagtgtctttatgacatggaactgtttaacaaaaaagtgtaaaaagaaagaactgtttgtttgttcagaaaggttaacacttgcacaaagatgtacatataaacaatgtttatatcgtctaatcacattgatattactcactagatgcgctaatttggaaaattattgagatttcttctggttgcggtggggtaatatcgatttcttgatgaaatttgccctgcagatatgttgccgtcgggaacgagccattcctgtcgtctttgaatggcacgttcctgaacgtgaccttccctgctctgcagaacatccagcgagccctctacgacgccggccacggcgacaccatcaaggccaccgtgccgctgaacgccgacgtgtacaactcgccggagaacatgcaggtgccgtcggcggggaggttccggccggacatcgccgggctgatgacggagatcgtgcagttcctgaaccagagcggcgcgcccttcaccgtcaacatctaccccttcctgagcctgtacggcaacgacaacttcccgctcgactacgccttcttcgacggcacgaccagccccgtcgtcgacaccaacggcatccagtacaccaacgtgttcgacgccaacttcgacacgctcgtgtcggcgctggtcgccgccggcgtcgggggcctccccgtcgtcgtcggcgaggtcgggtggccaaccgacggcgacaagcacgccagggcggacctcgcgcagcggttctacgccgggctgctccggaagctggcgtccaacgccgggacgccgctgcggccgaaccagtacgtggaggtgtacctgttcagcctcgtcgacgaggacgccaagagcgtggcgccgggcaacttcgagcgccactggggcatcctccggtacgacggccagcccaagtactccatggacctcgcagggcagggccgggacacggcgctcgtggcggcgcgcggcgtcgcctacctcccgcgcgcgtggtgcgtgctcaacccgagcgccacgccggacgccatgagcagggtcggcgacaacgtcaactacgcctgcacgtacgccgactgcacctcgctgggctacggctcgacgtgcaacggcatggacgccgccggcaacgcctcctacgccttcaacgcctacttccaggtgcagaaccaggtggaggagtcgtgcggtttccagggcctcgccgtgcagacgcagcaggacccgtccacgaacgcctgcaacttcaccatacagatcgagccgtctgcggccgccggccgacggccggcggcggtggccgtgacggtggcgacggccatgctgatctcggttctcgccgccatggtcacgacgccctgattggcgtgaggacatagttacatttgtagaggttttctgcttgattttgtagatactttggtgttgcctatacagcgattgatcgatacacgctcgtttggtcgtttcgatgtctaactgggtggctgaaatttcggcccatgaagtagatgggcttgtaagttggaaacaaattacggcccatttatatatggatatgggccggtttctgtgacggcccgcgtagcttcggaggaagcgaccacctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0656800, RefSeq:Os03g0656800