Os03g0661300

From RiceWiki
Revision as of 12:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0661300| Description = Beta-tubulin (Beta-3 tubulin) (Tubulin beta subunit)| Version = NM_001057360.1 GI:115454448 GeneID:4333632| Length =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0661300

Description

Beta-tubulin (Beta-3 tubulin) (Tubulin beta subunit)

Version

NM_001057360.1 GI:115454448 GeneID:4333632

Length

3920 bp

Definition

Oryza sativa Japonica Group Os03g0661300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26703147..26707066

Sequence Coding Region

26703267..26703660,26705750..26706019,26706112..26706788

Expression

GEO Profiles:Os03g0661300

Genome Context

<gbrowseImage1> name=NC_008396:26703147..26707066 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26703147..26707066 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagatcctgcacatccagggcgggcagtgcggcaaccagatcggcgccaagttctgggaggtgatctgcggcgagcacggcgtcgaccccacggggacgtacaccggcacgtcgccgcagcagctcgagcggatcaacgtctacttcaacgaggcgagcggcggccgccacgtcccgcgcgccgtgctcatggacctcgagccgggcaccatggactcgctccgctccggccccatcggcggcatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaactgggccaagggccactacaccgagggcgccgagctcatcgactccgtcctcgacgtcgtccgcaaggaggccgagaactgcgactgcctccaaggattccaggtgtgccactcgctgggaggaggcacggggtcgggcatgggcacgctgctcatctccaagatcagggaggagtacccggaccgcatgatgctgaccttctccgtgttcccgtcgcccaaggtgtcggacaccgtggtggagccctacaacgcgacgctgtccgtgcaccagctcgtcgagaacgccgacgagtgcatggtcctcgacaacgaggccctctacgacatctgcttccgcaccctcaagctcaccaacccatcatttggtgacctgaaccacctgatatcggcgacgatgagcggggtgacgtgctgcctgcggttcccggggcagctgaactcggacctgaggaagctggcggtgaacctgatcccgttcccgcggctgcacttcttcatggtggggttcgcgccgctgacgtcgcgcgggtcgcagcagtacagggcgctgacggtgccggagctgacgcagcagatgtgggacgccaagaacatgatgtgcgccgccgacccgcgccacggccgctacctcacggcgtccgccatgttccggggcaggatgagcaccaaggaggtggacgagcagatgatcaacgtgcagaacaagaactcgtcctacttcgtggagtggatccccaacaacgtcaagtccagcgtctgcgacatcccccccgtcggcctctccatggcgtccaccttcgtcggcaactccacctccatccaggagatgttccgccgcgtcagcgagcagttcaccgccatgttccgccgcaaggccttcctccactggtacaccagcgagggaatggacgagatggagttcaccgaggccgagagcaacatgaacgacctcgtcgccgagtaccagcagtaccaggacgccaccgccgaggacgactacgacgaggacgacgacgccgccgccgccgacgaggcctga</cdnaseq>

Protein Sequence

<aaseq>MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQL ERINVYFNEASGGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWA KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP DRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT NPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQ NKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRK AFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDATAEDDYDEDDDAAAADEA</aaseq>

Gene Sequence

<dnaseqindica>121..514#2604..2873#2966..3642#acgttctccaccctctctccatcgatcgatcgcaaaccacctcccaagaacaaccaagaaagagatcggatcaccgatcggcgcgcggcgagcgatcgatcgaggtgcaagcgatcgaagatgagggagatcctgcacatccagggcgggcagtgcggcaaccagatcggcgccaagttctgggaggtgatctgcggcgagcacggcgtcgaccccacggggacgtacaccggcacgtcgccgcagcagctcgagcggatcaacgtctacttcaacgaggcgagcggcggccgccacgtcccgcgcgccgtgctcatggacctcgagccgggcaccatggactcgctccgctccggccccatcggcggcatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaactgggccaagggccactacaccgagggcgccgagctcatcgactccgtcctcgacgtcgtccgcaaggaggccgagaactgcgactgcctccaaggtaacgtacacgtcgattttatatatacatatcctcttgttctttaaattcactgtgtttcgttaaaaaaagaaaaaacgaatccttgcgttcatggcattcctctgcattttctctgcatacgtgtttctcgggcctctgtaaaccgtcgctgaaaatttagaataggatcatatgattctttaactttttttttggcaagatcattttagacggtggcatcctaaaagtggacaaggtttgtactttctgtgtgtatttttaggtaagacagtattatgctacacattattagcctatcaccgcagcgtgttaagatccgcatgaaaagaatctggagttttttttttcttttgttagacaacagagtaatacgccaacttggcagcattgataatgagcaatctggtatgaattgcttgtgggtctcagaaaaaaaataaaataaaaatgaattggtggttccagttatgagagtgtgaattgttcaatttgaggagcaaaacaaaccagtagtgctgcaaatttcaaggatgaatttcagtgtgcaaacttatcataccattttaggttggatttgaataggaataccagcagcaccagttgttgaacccaaatttggacatacatggaaaagaccatacatgatacatagtagtactggttggatcgggttaatcagacagaagcacaacatctttactcgtggttgaaattgggaatatcttcaaaaaaaaaatcgaataagatgaaattattattttcagtccccatcacattacaccacttccacctgtcggaatgagacattcatcctgtgtcaagttgatccattggcatgatgggaaatcgggatcaacacaggctagaaattgaggcgccatatattgttggtttaaatttcagtagttctctgtgttagatctgtaaatcttatatcgagttgaatcaactgcttaaaaattggaacactatggatacatgttatgaaggttctaaaaacttcaagtgcacaaaaaattcacagaatacttgaggtacagagtactgcttatgtgcgctgaatactatttttccctctatgcataaaaggtgaatctgactattatgcattcattcattgccaagatgtaagatatgcatgttaaaaatgttacccagtaatcagtaattatcattgttttcttgaaaatgcgaggtacaacgtatgcccaaacgaattgaacccagcaacaaactaaaaaaaaaaatcccctaactgctactttctggcgaatagaattgtcgttgagagagagttttcatcagttcctcaggtggcaaacaactggtattgtcggtcagatgcgagttttcggtacagaaatacatcaccatcgcatctcaccatcttcttttgccggtgaaggttcatgaggttatcatcatcacaataataatgtactactagtagtagaaaaacaatcatactgtgactagtgacaatgttgtacgacctaacacaagaaagagtgaaggaggaggaggatgtatcagctaatggaacagagccgtcggtggtggttacagcggatgagacactcagacaggctgttgccagtctctggtggttgggttacatgatagatcgatggatggattatattagtgatgatgttctgattacttgcatatgtacttagcatgattgcctttggacgtatttgggagatggattttagtgcacgtaatcatcagaaacagaatataaacacattttcggattcaacttacatattattagaaacacaaattagtactacaggaatatgattagtccggagatctgataggacagataatgcggtgctagtttcttgaattgtttgcactttcatgactcttaacaggggcatctgaactttagctcggttaaatgtctaaacctcaatgtacagtagagttcagatcattttcattttcagttaagatgtctcatatacttatcctaatctgagtaatgtcctataactactgatggatagttggtttgttttgatacggagggagtatgtagtaacgtgagtgacatgcaattttgtgagtgcaggattccaggtgtgccactcgctgggaggaggcacggggtcgggcatgggcacgctgctcatctccaagatcagggaggagtacccggaccgcatgatgctgaccttctccgtgttcccgtcgcccaaggtgtcggacaccgtggtggagccctacaacgcgacgctgtccgtgcaccagctcgtcgagaacgccgacgagtgcatggtcctcgacaacgaggccctctacgacatctgcttccgcaccctcaagctcaccaacccatcatgtaagcgaagcgatcatgcaccttgaccttgtgtgtgtaatttgcttgaaattaacatgatggaaataatgatcaatttgctgttgttgtagttggtgacctgaaccacctgatatcggcgacgatgagcggggtgacgtgctgcctgcggttcccggggcagctgaactcggacctgaggaagctggcggtgaacctgatcccgttcccgcggctgcacttcttcatggtggggttcgcgccgctgacgtcgcgcgggtcgcagcagtacagggcgctgacggtgccggagctgacgcagcagatgtgggacgccaagaacatgatgtgcgccgccgacccgcgccacggccgctacctcacggcgtccgccatgttccggggcaggatgagcaccaaggaggtggacgagcagatgatcaacgtgcagaacaagaactcgtcctacttcgtggagtggatccccaacaacgtcaagtccagcgtctgcgacatcccccccgtcggcctctccatggcgtccaccttcgtcggcaactccacctccatccaggagatgttccgccgcgtcagcgagcagttcaccgccatgttccgccgcaaggccttcctccactggtacaccagcgagggaatggacgagatggagttcaccgaggccgagagcaacatgaacgacctcgtcgccgagtaccagcagtaccaggacgccaccgccgaggacgactacgacgaggacgacgacgccgccgccgccgacgaggcctgatcgatcgatcgatcgatccctcccgctttgcctctctggctctctgctacgctacgctacatatatttcgatcggtacaaacacacaatgtgccgttgccgtgtctgctgctactgctgctgcttgtgtactgtgcgctactacttgttgcatgccttcgttcgttgtcatcgttgttctctgtctaaatttgtttattcatgtacatgaaccgtggtttactcttttctatctctgtatatgttaggaaatgttatctacttcattttcatgggact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0661300, RefSeq:Os03g0661300