Os03g0664700

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Revision as of 12:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0664700| Description = RNA pol II accessory factor, Cdc73 family protein| Version = NM_001057373.1 GI:115454474 GeneID:4333654| Length = 22...")
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Gene Name

Os03g0664700

Description

RNA pol II accessory factor, Cdc73 family protein

Version

NM_001057373.1 GI:115454474 GeneID:4333654

Length

2201 bp

Definition

Oryza sativa Japonica Group Os03g0664700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26877882..26880082

Sequence Coding Region

26878203..26878289,26878380..26878462,26879091..26880048

Expression

GEO Profiles:Os03g0664700

Genome Context

<gbrowseImage1> name=NC_008396:26877882..26880082 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26877882..26880082 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcccctcgccgtgctccgggactacgccgcccgcggcgacctcgacaagatcatcttctccggcgacgaggtgctcttcgggtcggagtacaccttcccggccaacgcccccaccgccttcaccaacaagcagtcgggccgcccctacccgctctccgccgccgtcttcctcgcgcagcacaacgacctcaagcacaccgacttcatccaggccgcccgcctccgccgcatcccccccgtctccctccccgaccgtaagaccttcctcgacttcctccgccatggccaccactcgctccccaccgacccattgctcccctccgcgctcccgtccttcgcgccggagccccagccggcgatgcccgaggagcccgagggcgacaaggcctccggcgcctacatccgcgccctcgagcggacgctcaaggacaggaacgcgctcctcgacgcccgcggccgcgacttcctcgccgtgctgcagaacgccacgcgccgggaggaggagcgccggcggaacaaggacagcgccccctcctccgcccgccacgagccctcctccgccgccgccgcggccgccatggcgaagcccaaggtggagaggtccttcggggacgggttcgtgcccatcatcctcgtgccgagcgcgtcgcagacgctgattacgatctacaacgtgagggagttcttggaggacggtgtgttcgtgccgagcgacgagaggatgcgcgcgatgaaggggagcgggaagcccgagtgcgtcatggtgcagaagaagctgattcgtggggagagggccggtgctggtggtggcgcgacaacgttcgaggtgagggacaagccggcttcgcttaaggcagacgattgggcgcgggtggtggccgtgtttgtgctcggcaaggagtggcagttcaaagactggccattcaaagatcatgttgagatcttcaataaggttattggtttctatgtgcgctttgaagatgatagtgtggaggcagccaaagtggtcaaacagtggaatgttaaaatcatatctataagcaagaataaaaggcatcaagacagaacagcagcccttgaggtatgggagcggctagaggaatttatgcgggcacacacatag</cdnaseq>

Protein Sequence

<aaseq>MDPLAVLRDYAARGDLDKIIFSGDEVLFGSEYTFPANAPTAFTN KQSGRPYPLSAAVFLAQHNDLKHTDFIQAARLRRIPPVSLPDRKTFLDFLRHGHHSLP TDPLLPSALPSFAPEPQPAMPEEPEGDKASGAYIRALERTLKDRNALLDARGRDFLAV LQNATRREEERRRNKDSAPSSARHEPSSAAAAAAMAKPKVERSFGDGFVPIILVPSAS QTLITIYNVREFLEDGVFVPSDERMRAMKGSGKPECVMVQKKLIRGERAGAGGGATTF EVRDKPASLKADDWARVVAVFVLGKEWQFKDWPFKDHVEIFNKVIGFYVRFEDDSVEA AKVVKQWNVKIISISKNKRHQDRTAALEVWERLEEFMRAHT</aaseq>

Gene Sequence

<dnaseqindica>1794..1880#1621..1703#35..992#gatccagccgcagaagcaaaacccaggagcagccatggatcccctcgccgtgctccgggactacgccgcccgcggcgacctcgacaagatcatcttctccggcgacgaggtgctcttcgggtcggagtacaccttcccggccaacgcccccaccgccttcaccaacaagcagtcgggccgcccctacccgctctccgccgccgtcttcctcgcgcagcacaacgacctcaagcacaccgacttcatccaggccgcccgcctccgccgcatcccccccgtctccctccccgaccgtaagaccttcctcgacttcctccgccatggccaccactcgctccccaccgacccattgctcccctccgcgctcccgtccttcgcgccggagccccagccggcgatgcccgaggagcccgagggcgacaaggcctccggcgcctacatccgcgccctcgagcggacgctcaaggacaggaacgcgctcctcgacgcccgcggccgcgacttcctcgccgtgctgcagaacgccacgcgccgggaggaggagcgccggcggaacaaggacagcgccccctcctccgcccgccacgagccctcctccgccgccgccgcggccgccatggcgaagcccaaggtggagaggtccttcggggacgggttcgtgcccatcatcctcgtgccgagcgcgtcgcagacgctgattacgatctacaacgtgagggagttcttggaggacggtgtgttcgtgccgagcgacgagaggatgcgcgcgatgaaggggagcgggaagcccgagtgcgtcatggtgcagaagaagctgattcgtggggagagggccggtgctggtggtggcgcgacaacgttcgaggtgagggacaagccggcttcgcttaaggcagacgattgggcgcgggtggtggccgtgtttgtgctcggcaaggagtggcagttcaaagactggccattcaaagatcatgttgagatcttcaataagggtaaggatttcatgctttttcactagtgcgtataaagtcaaccaaatcactttaagattttaacataatgacacctatgttctgttcttgcgaattctagttgagaaaatttagccattgaacttaggttagtttgctattgttctgtgcagcgagaagtaatagacgctttgtttttgtactagttaaagttcttcatttggccgccttgtagatataaggttaatgttgttacctaacaaacatgactgttgatggttcctgctaaaattcatgcaatcatttgcctgtaaggagtatgctttactctatttgtaaaaatctgcatgatagaattactaatattgtatttgttttggctaagcatactttatataggtgccaaaagttacttcaaattaatttaattatgctaattgtgttgagcatgtttaatcatttagatcgcatgcttttgttttttcatttcataatacagttaacaatttaatcagaaaatactggtttgaaatttgaaagaaagcagtctttagaatgctctgttcctaatcagcatgaattttttttagaaggcacacaatatgttgattattgtttctgcggcataacatcttgaaatttgtgtcagttattggtttctatgtgcgctttgaagatgatagtgtggaggcagccaaagtggtcaaacagtggaatgttaaaatcatatctgtgagtgttagatgcatttagttcccatgttttaaagttttttttaaaaaaaatcccttgctaacaattacttgatttgctgaggagcagataagcaagaataaaaggcatcaagacagaacagcagcccttgaggtatgggagcggctagaggaatttatgcgggcacacacatagttgaagtatcatgtacaccagaacggcaggatcatgtaagcggtctatcttatttttatttgaaaagaagatcctgagttctttggagttctgtaatgttggacataatggtttcctactccatgttctagtactgctgccttcgtgtatcatgaatggtttactaatccctatggagtatggattgaccaatcatagataatttgtgatctaatctgaattgcactgtagctagtgattagtcagctctgcatataactgatcctcacaaagaacatgcatgatgtttgtgactgtcaaggctatcatgctaattctgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0664700, RefSeq:Os03g0664700