Os03g0668400

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Revision as of 12:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0668400| Description = Protein of unknown function DUF860, plant family protein| Version = NM_001057393.1 GI:115454514 GeneID:4333675| Leng...")
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Gene Name

Os03g0668400

Description

Protein of unknown function DUF860, plant family protein

Version

NM_001057393.1 GI:115454514 GeneID:4333675

Length

7070 bp

Definition

Oryza sativa Japonica Group Os03g0668400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27104880..27111949

Sequence Coding Region

27105817..27106737

Expression

GEO Profiles:Os03g0668400

Genome Context

<gbrowseImage1> name=NC_008396:27104880..27111949 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:27104880..27111949 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcaataagattggaagaacacgtatctctgatttccaaaactcttcctttcattcaacacaaggctatgtcctcatattcaactggtcatggccacaggcccaagaagaagctttatcaccgtgaacctggccttgacaaggccatggacctccaaaagaagcctgctctcctccttcgtcttcgggagctcatcttgtcccaaaagacaaattccatccttatacgttatcttgaaaaggaggttggctttgtccaaaaatggaacttcctttcacttatcaagcggcatccaaacatcttcttcgtctctggtggtagtgcctcccgtgagccaatttcagttacgctcactgagaaggccaaaaagatatccagtgaggagaccctagcacgagaactaatggagccaatcttggtgaaaaatctaaggaagctactaatgatgtctttggactgccagattcctatagagaagattgaactcatccaatctgaattgggtttacccaagaacttcaagagcaacttgattccgagataccctgaactattttcagttcgcgaggtgaagggattggaccatttgtgtttggagagttgggattcttcactggctgtcacagcccgagaagaaaaattgaattttgatggattccatatggactgtagagggattcctaaagatggaaatgtctttggtccttttgctttcaagttgaagtatccagcaggatttaggccaaatcggaagtatcttgaggaggttgtcaggtggcagaagttggcatttccatcaccttatctgaatgctaggcgtgtggagcctgcaacaccacaggctcggaagcgagcggttgctgttatgcatgagattttgagcttgacaatggagagacgattgacatctgattag</cdnaseq>

Protein Sequence

<aaseq>MMAIRLEEHVSLISKTLPFIQHKAMSSYSTGHGHRPKKKLYHRE PGLDKAMDLQKKPALLLRLRELILSQKTNSILIRYLEKEVGFVQKWNFLSLIKRHPNI FFVSGGSASREPISVTLTEKAKKISSEETLARELMEPILVKNLRKLLMMSLDCQIPIE KIELIQSELGLPKNFKSNLIPRYPELFSVREVKGLDHLCLESWDSSLAVTAREEKLNF DGFHMDCRGIPKDGNVFGPFAFKLKYPAGFRPNRKYLEEVVRWQKLAFPSPYLNARRV EPATPQARKRAVAVMHEILSLTMERRLTSD</aaseq>

Gene Sequence

<dnaseqindica>938..1858#ctctgccactccggcggcagcagcagcgccgccgcgcaggtcgccgccgcccccaacctggccatgtcgccacggcgcatcctcccagctcccccacctcgcatcctctttgcttactgggttcttcctctccgtcgtcgccgcgtggtgccggggtgccgcctgccggcttggtgacactcagcggcccaacctccaggttcagaaattttttcttgtcgagtccatgtcaattagtgtaatacaagcagacgagttgtgtgatgcggcattcaatttaatgtattagccatttacgactagtttttttaatcgatttcattccttttgaactataaaaagtaataggttgcaagttgaagaggaagagaacaggacatatttttgggttttattagaaaaggaaaaaaaaaatggtgcgctagctttgagtatgttcttatgtttgttgcatcctaggaacaaagtatcaggctaaactgctaaactaatgatcatccacattgcttttaaaagaagacctaaaaagttattgatataaggaagaatggttgggatgagcgctagcctcaaacacagttaatatgaacttcaaatatcatttcaatcatgcatgtgttctgtacttctgttatatcatggtgtgccgcctacacatggaggtggggcatgatccatgagtagtgcagtcaggaggaggaagatgaggggtgattttattagtgtttttgcatgaatcttggagcaatttcaaccatttaaatgtgactgaaattttcttcttatattttattgcctgacggcttgatgtcccttattgaggatacaatttgtcttctcctttttgcagaagtttgtgttgtagacttggtgcttcattatttgcattcctggatgcttgatgtatgatacacacgcagactggcattgattccaaatgatggcaataagattggaagaacacgtatctctgatttccaaaactcttcctttcattcaacacaaggctatgtcctcatattcaactggtcatggccacaggcccaagaagaagctttatcaccgtgaacctggccttgacaaggccatggacctccaaaagaagcctgctctcctccttcgtcttcgggagctcatcttgtcccaaaagacaaattccatccttatacgttatcttgaaaaggaggttggctttgtccaaaaatggaacttcctttcacttatcaagcggcatccaaacatcttcttcgtctctggtggtagtgcctcccgtgagccaatttcagttacgctcactgagaaggccaaaaagatatccagtgaggagaccctagcacgagaactaatggagccaatcttggtgaaaaatctaaggaagctactaatgatgtctttggactgccagattcctatagagaagattgaactcatccaatctgaattgggtttacccaagaacttcaagagcaacttgattccgagataccctgaactattttcagttcgcgaggtgaagggattggaccatttgtgtttggagagttgggattcttcactggctgtcacagcccgagaagaaaaattgaattttgatggattccatatggactgtagagggattcctaaagatggaaatgtctttggtccttttgctttcaagttgaagtatccagcaggatttaggccaaatcggaagtatcttgaggaggttgtcaggtggcagaagttggcatttccatcaccttatctgaatgctaggcgtgtggagcctgcaacaccacaggctcggaagcgagcggttgctgttatgcatgagattttgagcttgacaatggagagacgattgacatctgattagctagaagtcttccataatgagtacaggctgccatgtaagctacttctgtgtttaataaaaaatcatgggatattctatatcactaataagggagcaaggagcactgtcttcctcaaggaagcctatgatgatagtaaacttattgagaagtgtcctctattgaaattccatgatcaatttgcctctctgatcggccaaacatgctccgattcaaatgatgtattgccagcataatgggagcaataatttacaagcgagagagacaaatcacaatgtggcatgtggctggctgattcaccctttagtttctactcaggccagtgcaaacatgactcatttgcatgcgaccaaccatgcaagtcctctgtgtgatggatgctttattcagcttcaagttttgcatgaaatttgggaccccagaaatcaagtggcagctcagatctcagcagacaaggcattggttgttgtactgaaggacatatgttcaattcctacaattggggcattcaactgttgaagatattacggttagttttcaggggttttcttgcgagtattaccttcagcctacacttgagagaaaaagagaggatgcattagcctcagtttataccttaaaactgaatttgcttctcttaattggataactgggtgccatttctttcttttctaataaaataatgatatagtcagatactaattgaccttaaaatgtattgtactatcacgtgattctgcttccagaaaggttcttgatgttgtttgtcatcatagaatgtgtcaaaccactatactgttttcgctagattatgcttgtaatttgttacagtcaacattttgcttatgggtcaattgaactattggcaatagtagtagtactaatccattctgctattgttctcggttttttttttcccttcatccatacacaggcagaaagtgcctgtaaaatgctccacgtgtttgtatcaaagtttccttccatcaattggttcttgttctttattattacttgaaaccaacttcagccatggaaatctctattgctctctagagttctccatcagaattcagaaatttgaaatactgtatttagttcacatgctgattatgatttgaagcaactgtgaatcatcttaaatcctagctgcaacctgactacatagattagtttctattttctactttcttgcattaccacattcatgattcatcatgtgccctatgacagattgatgagaaatatcagtactatatgttttcctgatgctgtgcattagtggtcttatagtattcaacttggttcataagtgcattaaccctaccagtatagaccaacattcgtccagtacagtgacctgtttcatgctatgtgagcctgaattatgattgcatctagtggtagacatgtctgtactctagcggtccatattttcttgtgttcagtctaggttttatttctgtattgagtattctgtatggaacaaggcacaaacaaacatgctaaacccatgtaaattgattgttagaacttaatttgcagtaccgtgatgcataatatagatgatagttgtggatgtgctttcatgtatctttctctgcaaaaggcctgggtgtgttttttccatgttaactcaaaattatgccatgtagcttgtgcattcttaacaatggccgaattcgttctgcagatcaccttatttctgttaacaagaaagatttgtgttcttgtgcagttgtgctcatgcgattgtagttgacgtctccataatctacagagacaaatgttgagtggaggaaacaccaagtattgttaactaccagagaaaaatggcctttcaattaccgtataatctttgtccagcaggaacaggtatgacttaagccaatatgaacctttttcttaatgtctagtataaatacagcaaccaaatctttgcaagtgaaatatcaccaagctgacggtacttacaaaataaatggtagtttggtagttagctatttgccagtttagaacagtcatgtaacatgtattacatattgtcagattattctgtggccagtttgtcgtgccaatgttgtttttgtgtaatttgtaattactgttctgtgtcagaatttagacactgattcagttgtcaagtaattttttttaatggaatactttgacagattggtaaaatgggttttaatgactgtctgaaagcttttagattaactagttgcttggtaatgaataataataagagatgaaattggtggacactcattgctgttgatctgggaccatatcctaaacatgggaagctttattaatggccatggcaattcctgcaacaggctaataacagtcacaagtttgcatccctttcacacctccacgctatcttgagtatgttctgatatttgcacatcaaagtgcttgtccacatagaattattggtgggagatgcattaaggatgtttaccaatagttgcttgcaacacaaaatcaacctgtatgtaggtgggatccattgagataaccagatgaacatatgctaagtaaagatggaccgacaaaattatgggtggcctggacacattgaagtgaaatgaggccaactggctgctcctcaattataacccatgaaagtgaggagcatacccaggagcagtgattgggaccagattctgcagacactaagagagcacctataaatgatagtagtggtcatgatcctggtcagatgcactaaaagctagatttggatgggtgttagtggctgttagtttaggcaggtctatcctcaagtcatacaaatacagtggatggagactagaggccggcccttttctgatcctgtttattttttctggtaagcatttatgccttcctctgcagtagcctttccatctgatgttacttccatttaacttattgtgtgaacatttatttggcgtctcttaaaattttttttggctctattattggccaccaagagcacatgcttttctttgccctccagtcaccttcagctcctagtgacccggctggatttccaattgatgtgtctttcttgtacaccagtctttgcctccctgtccctgtccttgagtagcattacctgttccataaacaacttttgtgtgtggctgggccctgcctttttgagttggcaacttccacaaaatcacaagagttatcactgcttcagaaccgcttcgttttgctgtccctttctccggaccctgccttgactttaggaagctgccattatctttacttgtctttcactttgattttcatacttaccactagatttacaccaaaatataattctattattctaattaggtacatttttggtttcttgcgtcttatcttattattgatcaatgcagcattaatctcttcatttgtgatgactgtcttctctccattgattcttagcttttaaaaaagttattaaaataggtgccttttacctttctactctcggtgtttttcaaactctagagagggccgtcccgtgagctgcattgttcaacgcctctttgatggttgaacgtcgcaattagggtggcaggtccagaccacctcctgtttctgtcatcatctgcctgatgtctatccattaggagaagaaagcacctcatttgtgttatgtaacaatttctctttttccttgcttgaatgaacagactggcgcctagcaagcaaagaatcctgattcgaacatcacagcctgcttggccatcgccatccctggttctggacaaaatgtttggactatgtatcagcgtcatgtttgagtctcatttcttcctactcctgcctagcctctagtagcaagtcatttttatacttgtctcatctgaagaaagtaatgtgtgcatttgatatatccagtgcaggggggtccatcttggcgtagccgtgggtggtgtggttggttcagatttcacaatcttggcatgtaaagaaggatgccctgtccctctgcatccagttccttgttcttgtagtgtttccgaatttttcctgatctttctttatctctgtgacatgttgccaagtgaagacatatcaaaggcagactattctacgcttcaggaataaaggggaggagataatcccagctgattactcaagaaacgattttattccaagtcaatcagagtgagcatctcaaggagctgaatcattctagcttttaccccaccaccaaacccacaaaaccggtcatcaatttaggtaagcatttgacataagttcttggttggaataatatcctcttttttctttttgcattcatcaggaactgtgaaaaattctttgcctgattctttctaccatataatactcaagaagcatcatacttttattagacaatcatctagtgaacattttgagcgatggggccctctgagatagagcgatatatttattcaaacataatgtttcgtaaaagcagcaaactgcacctaataatttataataattgaatgcgataatcctggtggaggtgtaataacatgtccaggctgaaagcacagatcaggttactgtacacagtaatgatgagcctctgttaaagctaaactccccttgtcagttatcgtgctgttgaacaagatgatgattatgacgaccatgatggccgccctaattgccatttgccaacctatctactgctaatctaatctaatctacgccttttgtactactagtagctgttagtagtggtactagtaattctgaagaaagaaatgtggcttgtgcaggcagggaggcaggcagggctgcatcgtgggaatgatagcgtggggggagtactgcaggtctttgtactccttgtctgctgtgctgccggttgatggattggaagccacacctgctgctgctattgctaacgcttagctgcatctttcagtctttcggccaacaattttttttgctttgttgccatccgtttttggtccctgtttcttttgctcccttcagcatcaatccacctcacacgttcaccgcccctcgctacctcttctactaccattcgacgcacacctcagaaaacaaatcgtcatttttctttttttttttttgccttttgttaaagaaattgactgctaatgctaggttgctatcctctgagccataattcattctgaagaaagtatatgtaaattattggatccacaaatcatatataatatttagaaagaacat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0668400, RefSeq:Os03g0668400