Os03g0669700

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Revision as of 12:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0669700| Description = Cyclin-like F-box domain containing protein| Version = NM_001186650.1 GI:297722430 GeneID:9267467| Length = 4344 bp|...")
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Gene Name

Os03g0669700

Description

Cyclin-like F-box domain containing protein

Version

NM_001186650.1 GI:297722430 GeneID:9267467

Length

4344 bp

Definition

Oryza sativa Japonica Group Os03g0669700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27183635..27187978

Sequence Coding Region

27183635..27183699,27185661..27186304,27187131..27187978

Expression

GEO Profiles:Os03g0669700

Genome Context

<gbrowseImage1> name=NC_008396:27183635..27187978 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:27183635..27187978 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggtggcggcgctccccgaagacgtgctcgcggaggtattcgtccgcctcgacccgcgctcgctcgcggcgtcccgcggcgtctccaaggcgtggcgcgccgccatcgacgcccgccgccgccagctgtgcgggggcctcctcccgcgctcgctcgccgggatctacatcggccaccagtccaccgcctccgcctcccgccacgtcccgaggttcttcgcccgccgcccctcctccatctccggcagcctccacttcctgcccgccgtcaccgccggcggcgatatacccgtaccaccacccggccgccacgagatccacgaccactgcaacggcctcctcctcctcggcggcgaccccgaccccgacacccaccgcccggccatcgtcgtcgtcaacccggccacgcggtggtgctcgcccccgctgcccccgcgccgcccgccgcggatgggcgccagcaccttccccgccgacttcctcgcctacgaccccgccgcctcctcccgctacgaggtcctctccgtcacctgcttccgccgcagatgcagcgcgtgcagctgctgcctcccgccgccgggctctggcacgtcgtcgtcgtcgggcgaggaacgcgtcctcctggacgagttctccgagtggccgccatcgctgcaaaccctagacgtgtactcgtcgagcaccgggcggtgggaggagaggaccttccatcggcaaggggaagccgcgaggacgacgatcgccgacatgcggatggatttttcaggtcacaagtgcaaagccgtctactggcaaggagcactctacgtgcattacaaaacatattttatcatgaggttttccttgtcagatgataagtaccaagtgattaaaatgccaacggttaggtcgaatggccactcgcatttctgtctagggaggtcagagaagggcgtgtaccttgcattgatcacaaagccacgctcgcttcaggtttgggttctcaacgaatcgtgcgacgaaatggagtgggtgccgaagcacgaaaacaacctcgattccgtgtttccccggcaaactcgccgccgatggatgctcttgcaagatcttgataagaaggacagtactacatttcgcaaggaacatgacgaagagatcgatttcgaatggagctccgacggcgacgatgacagcgatcatcgcggtaatgttcctgagtacaggctcccagcaacgatcttccagggataccatggaaacgttgataataatgccctcggatttggtaattttccacaaccgccgatcccaatgttctatcatggataccatgggaacatcgatgttctcggattccatccgtacaaggagattgttttcttatgtgaagcgatgcagactggactagcctaccatttgaagacctcaaagatggagatcttgggcaagttacctctggtcagcagctgcgaggaaattttatccaacaaaagtttcaccggtggtttcgaagattgcagattgccagtggtgaaacgggagaacactcgttggaggatagtgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAVAALPEDVLAEVFVRLDPRSLAASRGVSKAWRAAIDARR RQLCGGLLPRSLAGIYIGHQSTASASRHVPRFFARRPSSISGSLHFLPAVTAGGDIPV PPPGRHEIHDHCNGLLLLGGDPDPDTHRPAIVVVNPATRWCSPPLPPRRPPRMGASTF PADFLAYDPAASSRYEVLSVTCFRRRCSACSCCLPPPGSGTSSSSGEERVLLDEFSEW PPSLQTLDVYSSSTGRWEERTFHRQGEAARTTIADMRMDFSGHKCKAVYWQGALYVHY KTYFIMRFSLSDDKYQVIKMPTVRSNGHSHFCLGRSEKGVYLALITKPRSLQVWVLNE SCDEMEWVPKHENNLDSVFPRQTRRRWMLLQDLDKKDSTTFRKEHDEEIDFEWSSDGD DDSDHRGNVPEYRLPATIFQGYHGNVDNNALGFGNFPQPPIPMFYHGYHGNIDVLGFH PYKEIVFLCEAMQTGLAYHLKTSKMEILGKLPLVSSCEEILSNKSFTGGFEDCRLPVV KRENTRWRIV</aaseq>

Gene Sequence

<dnaseqindica>4280..4344#1675..2318#1..848#atggcggcggcggcggtggcggcgctccccgaagacgtgctcgcggaggtattcgtccgcctcgacccgcgctcgctcgcggcgtcccgcggcgtctccaaggcgtggcgcgccgccatcgacgcccgccgccgccagctgtgcgggggcctcctcccgcgctcgctcgccgggatctacatcggccaccagtccaccgcctccgcctcccgccacgtcccgaggttcttcgcccgccgcccctcctccatctccggcagcctccacttcctgcccgccgtcaccgccggcggcgatatacccgtaccaccacccggccgccacgagatccacgaccactgcaacggcctcctcctcctcggcggcgaccccgaccccgacacccaccgcccggccatcgtcgtcgtcaacccggccacgcggtggtgctcgcccccgctgcccccgcgccgcccgccgcggatgggcgccagcaccttccccgccgacttcctcgcctacgaccccgccgcctcctcccgctacgaggtcctctccgtcacctgcttccgccgcagatgcagcgcgtgcagctgctgcctcccgccgccgggctctggcacgtcgtcgtcgtcgggcgaggaacgcgtcctcctggacgagttctccgagtggccgccatcgctgcaaaccctagacgtgtactcgtcgagcaccgggcggtgggaggagaggaccttccatcggcaaggggaagccgcgaggacgacgatcgccgacatgcggatggatttttcaggtcacaagtgcaaagccgtctactggcaaggagcactctacgtgcattacaaaacatattttatcatgaggtaaaccatttattacatgatctcccttcgttttaaaatttattgacttttcgcataatgcttcatcattcgttttattaaaagatatatatagataaatactctctccatctacttttgatggtcatatttccaaatatgaaaagtttatttttgataggcatatttcaatccaacaacctatcatcttaatgattttctcaaatttaatgcgtgactccccattcttccacacatgattggctacatgggcattgagaaatgtaaatattaatgaatcgcttatttacaaggaattactagtaacatgtttaaatggatgataaatataattacttattcttggtctgtgtgtcaagatgaaatatgtctatcaaaagtatatggagggagtattgtttattttgttatgacctgctttttcattaagaaaaagtaatcttaacttatacttttagatatttatactaaatttttgaataagtcaaatggtcaaacgcggtataaaaagttaacagccttatacattttgaaaaataaggtactctcttcatcccagaatataagaagttttagagttagacacgattattaataaagtaagtagaagtgaatggtgaagggttgtgattggttagaaagagaatgttggtggagaaattgttaaattttgagataaatcgtgatggctaaaagttgttatattttgggatggagagagcagtatattacatcctctattatattagtgaaacaaaaatgttattactcaagttatgggtgatttgttgatatcatattttctttcgattatttgattctgcaggttttccttgtcagatgataagtaccaagtgattaaaatgccaacggttaggtcgaatggccactcgcatttctgtctagggaggtcagagaagggcgtgtaccttgcattgatcacaaagccacgctcgcttcaggtttgggttctcaacgaatcgtgcgacgaaatggagtgggtgccgaagcacgaaaacaacctcgattccgtgtttccccggcaaactcgccgccgatggatgctcttgcaagatcttgataagaaggacagtactacatttcgcaaggaacatgacgaagagatcgatttcgaatggagctccgacggcgacgatgacagcgatcatcgcggtaatgttcctgagtacaggctcccagcaacgatcttccagggataccatggaaacgttgataataatgccctcggatttggtaattttccacaaccgccgatcccaatgttctatcatggataccatgggaacatcgatgttctcggattccatccgtacaaggagattgttttcttatgtgaagcgatgcagactggactagcctaccatttgaagacctcaaagatggagatcttgggcaagttacctctggtcagcagctgcgaggaaattttatccaacaaaagtttcaccggtgtgtctcttccatatacaccgtgctggatgtgatggtgcttgagaagaacaaattattctggaagacacattgatcgctctgctgcaatatatatacaggataatatgtcaaatggatgatggatccatggtgatctggcgaagatagcatttgtgtttgcaagatgattgagctgcgaaacaaaaatgcctgctcactttggagttctgatcaagccgttctctttttttaatataaaaattgtttgctactatcaaataaccgttcaagctgtcttaatctagttccgtttcttctttatgtttcttgtaagctatcttaatttagttccgtttatttcttttaatactatcagcattttaggagtataatctgatttgcgacgataaatcttgttttcccccttcctaatgggtaatttttaggagcgacatgttttgtttatatatataaattattatttctttttctaggtaatgtatatcttgttttgcttataatatgttctggaaacgatgatttcgcaagaccaattcattgttttacacaatgccataaggatttggcactgatgcgatgagagacaagaaatggttactccatccattctaaaatatagcaagttagcaatataaagctcttatcatgattcgtagtattagcatgtatcacatcttgtactagtttgctatatcttggaacaaattaaagagggtgtgtatttgccatggtgacaatgcaatcagtagaaatggagataagaattatgatgtagacatgttttttcctggctagtcgactcatttccttccatcggtttaattttgtttactatcataatttaaagtaaataatgattcaatctggtgatttaataattaaaaaaagtccaagcatataagggaatatgaagcggtcacagtgcggtgaggtggcgtttggccttatctcgccaccttggagattctaagccacgttggcatgggttgtgccctagtgaggagcgcgagccttcacttggacatgcgaaccatgtcaaaaattatcagattttttcaataggaaggtcccttcttgaacttcctttgccgatgtcgtcaaagcttcaaccaaatctaacaaagtagacgaagcgagtgaagggagatcccgctgccatcgtcgtcgagttgtcgtcgcctcctctggaggccaaatccggttagctcagtgacacggagtggccaccgccgtcaacttcgagatgttgctgccgccatcgtcgagctgcccttgccgccatcattgagctaacaccactactgtccgaggcccgatccggcaaaccacgtgccaaatttgcacgaggtgggaggggagggggtagacaacagcgccccatcaaggagttggataggtgtggtgccggcggaaggtagagggagactggcgccctacggaaggtagagggagactggcgccaacgctggaggaagagttgcgcgacgagcggtgggggagagcgtgacagggatgactaggaggatgggtgggtgaatgttttttttctaatttttagggtgtttggtgtaaaatattggattgcctgcaaattacaaaatatgagctaaaataggaaatagcaaggcctgatatgcaaaattgaaacacgtctagagctactttgcactgtggggaaaaatgatttgagaacccgtgtatttatcctaatagcactatgaggttactcgtagtaatatcttgtactgtgaatggcctaaaagcactttcatcacagcccactgtaaacttagtttcttccctacatttctagatactagcctccctacatttctagatactaaccaagagcctgtgtgttgcaacgaaaaacaaattgagtttctagcttattaattcaattaaacatatatttagtgctagtagtactcttatgattcctgttattaaataagtaggtggtttcgaagattgcagattgccagtggtgaaacgggagaacactcgttggaggatagtgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0669700, RefSeq:Os03g0669700