Os03g0679000

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Revision as of 12:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0679000| Description = Conserved hypothetical protein| Version = NM_001057429.1 GI:115454586 GeneID:4333716| Length = 2450 bp| Definition ...")
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Gene Name

Os03g0679000

Description

Conserved hypothetical protein

Version

NM_001057429.1 GI:115454586 GeneID:4333716

Length

2450 bp

Definition

Oryza sativa Japonica Group Os03g0679000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27646266..27648715

Sequence Coding Region

27646460..27646538,27646639..27646766,27646857..27646919,27646997..27647051,27647180..27647253
,27647489..27647632,27647732..27647793,27648277..27648328

Expression

GEO Profiles:Os03g0679000

Genome Context

<gbrowseImage1> name=NC_008396:27646266..27648715 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:27646266..27648715 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggtgagggtggtagacaccgcaaccccttcctcccagccctcatcaggtcaagatgcaaatgctgggcatccgtctcctcctagctgttccctcttaagtgctggaagatgttatgctggaacccagaatgtctctaatatacaaaaagaagaagcttggaaagttaatgtgcggatccatggctgtgatcttgaacagggttatttatgtggaacaatggaagcacttaatgttcccttagctgatacccctgtggtaacgttctgggagggggagatagtggatgctaaaaattatacatttttcactggcaagtgggaagcatccccagaggatgatattagacactggtccaagttcccatcatttacgcctcttctgagtcagattgagacagatggtggcaagtccgtggacctcagcaactatgcttacatattcatgagatggaaagagcagtactttgtcaatgttggagtggactgtgggttgaccatagctggtttctactatgtctgcttttcatgtagcgacggttccattagcgggtattattatgatccaaacagcagtccgtttcagaagcttgaactgaagtgtaccaatgagaaagattctggatttaccttttcgtcctacgagctgcagtga</cdnaseq>

Protein Sequence

<aaseq>MPVRVVDTATPSSQPSSGQDANAGHPSPPSCSLLSAGRCYAGTQ NVSNIQKEEAWKVNVRIHGCDLEQGYLCGTMEALNVPLADTPVVTFWEGEIVDAKNYT FFTGKWEASPEDDIRHWSKFPSFTPLLSQIETDGGKSVDLSNYAYIFMRWKEQYFVNV GVDCGLTIAGFYYVCFSCSDGSISGYYYDPNSSPFQKLELKCTNEKDSGFTFSSYELQ </aaseq>

Gene Sequence

<dnaseqindica>2178..2256#1950..2077#1797..1859#1665..1719#1463..1536#1084..1227#923..984#388..439#agagcgctgcacaatcgacctccgcctccccaatccatcccgtctcgtcgcccgccgccgtcgacgactcccgtctcctccgcctgccgccggcgccgatctccatcctgctagcagaggtggcgccggcgttctcctgctcccgccgcatcatcgctcaccggtgagcatcctaatccatcccgtccggcctcgaatttcggtctcctcgcccgccgcttgtgccgaaccaccccaatccggcgagcagaggtcggcgcccgtggtcctcctgcagtcctgcttccgccgcatcgtcgctcgcctgtgagcatccttcataaggtattttgtgtttttctcgagacatcgaaccagcctcgtcgtcgccggcgaccgccgccgaggatgccggtgagggtggtagacaccgcaaccccttcctcccagccctcatcaggttcgtccacctcccctaccttctctatgctaatgcacccaacccctaatttgctgtgtaatccaagtttttttggatctgatatagcctaatcaggtatcttctagggtttgatttagtgcgattttaaggtctattggtaatctagattggtctgagttgtactggggtatatgtgttttgatccttttggaatactcaattgttataattttggccactgacgcaatgcattatttggggagagctcggatggttttgtagctaagttgccaactgcttgtaatgtattgtatgtttttaaggcgttgcaatgcttgtggttttgtgtcaagtgttttctgtttcaggaggccttctaaataaataaaccaattgttgttttagttcacctgcaattgaaattcattagttattttgtatgaatttctggcaatagatagcccaccatgccaatgtgccatactgattaaaatgttgcaggtcaagatgcaaatgctgggcatccgtctcctcctagctgttccctcttaagtgctggaagagtaagtctttttgtgttgttatttggaacttgaccaaggatcaaatcttcttatcggtgtggtttatggaactgaccatatgcttgtaccatctttcagtgttatgctggaacccagaatgtctctaatatacaaaaagaagaagcttggaaagttaatgtgcggatccatggctgtgatcttgaacagggttatttatgtggaacaatggaagcacttaatgttcccttagctgatacccctgtgagcaacctacttcattttccactttgactctgatctttatgttccaaaattgttcaactttgttttccactttgactctgatctttatgttccaaaattgttcattaagaatacatttgtatactaattcagtaggcaaacagtttgtccgataaaattttaaaatatgctatgctttacttcttgttcccattatctgatttgcatagcaatttgcaaataatttccataggtggtaacgttctgggagggggagatagtggatgctaaaaattatacatttttcactggcaagtgggaagcatcgtgagtatttaactatttacgttttatccttgatactatcatctacttgttttattaatagatgcccaagtgtatggtaacagtccaaacttactcatgaaacattactcctgcttctgcttttgcagcccagaggatgatattagacactggtccaagttcccatcatttacgcctcttctggtattctgttgcctatcttcgtgttgttagttgccacgatttttttggatacatttctcacttatgtttttccacagagtcagattgagacagatggtggcaagtccgtggacctcagcaactatgcttacatattcatggtactgcaccatctgacctttcatgtatgtgcaccatttattgaattacaaagccataacaacttagcattattctgatgctacatgtagagatggaaagagcagtactttgtcaatgttggagtggactgtgggttgaccatagctggtttctactatgtctgcttttcatgtagcgacggttccattagcgggtattattatgatccaaacagcaggtaatgtatattttgctggcactttttattgcgatgttacaactaaattctatcgaggaattgaagtgatataaatatttcctgctctctcaatttacagtccgtttcagaagcttgaactgaagtgtaccaatgagaaagattctggatttaccttttcgtcctacgagctgcagtgagagactgacaggcctgctgtcattatagtatgtgcggatgttaatatacacaatgtatgtactgaactcataattctgaatggtgtcccattaaaagggctgagatggcatgtttgtaacagtgatttggagcaagatgtattttattttctttgtaatatgaatataagctggtaaactttctagtttgaact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0679000, RefSeq:Os03g0679000