Os03g0685500

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0685500| Description = CHCH domain containing protein| Version = NM_001057461.1 GI:115454650 GeneID:4333749| Length = 3387 bp| Definition ...")
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Gene Name

Os03g0685500

Description

CHCH domain containing protein

Version

NM_001057461.1 GI:115454650 GeneID:4333749

Length

3387 bp

Definition

Oryza sativa Japonica Group Os03g0685500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28103750..28107136

Sequence Coding Region

28104025..28104114,28104486..28104658,28104750..28104830,28105022..28105075,28107022..28107040

Expression

GEO Profiles:Os03g0685500

Genome Context

<gbrowseImage1> name=NC_008396:28103750..28107136 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28103750..28107136 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgccgcagctcagcaaggtctcgccctgcaccacgtgctgctcccgtgaggaaccctccgcagccagcaaggcaggctcctcctccagctcctgcccagaacggaggtggctctatcctgggaggaattggttccactattgctcaaggcatggcttttggtactggtagtgccatggcacatagggctgttgatgctgtaatgggtccccgtaccattcagcatgagactgttgtctccgaggctgctgcctctgccaccccaatggccaacgccactccatctgactcatgcagcatccattccaaggccttccaagactgcatcaacaactatggaagtgacatcagcaagtgccaattctacctggatatgctgaacgagtgccgccgtggtggtgcatctgcttag</cdnaseq>

Protein Sequence

<aaseq>MARRSSARSRPAPRAAPVRNPPQPARQAPPPAPAQNGGGSILGG IGSTIAQGMAFGTGSAMAHRAVDAVMGPRTIQHETVVSEAAASATPMANATPSDSCSI HSKAFQDCINNYGSDISKCQFYLDMLNECRRGGASA</aaseq>

Gene Sequence

<dnaseqindica>3023..3112#2479..2651#2307..2387#2062..2115#97..115#aacctcccgacccgttgctgccctcttcattcgctcgctcccctcctcgccgcgccgccatctagggtttcgtcttctcctccgccgccgaccgccatggctcgccgcagctcaggtaacccccatcctctctctcccccctagccccagtagccatgcggcgtttgggattgggttctcgcgttgaacgcgcccgttgttgttcttgttcggatctgtggccttcgtttggattgggtagattttcgattcggatcgatctgcgccgcgcgattgggcgattcgtggtctcacgtttagcgtttggtgggatgtaggatcaggaagtgccctccctcttgtattggcgtatttagctgctagattggtcagatctgtcgtcggtgtatacataggactctacccgtgtttgggggattatcgaaggggttcttttttttttttagatcaggaacggggaaaagattgcttcttgaataaccggttgcgaattgttttgtggcaaaatgcgcaggcggttcagacaggggcatataacaaagtttgaatccataatatattagggaaaggaaatttccattgatcctttcttagatggactccacatatgtcttatattccattgcgaattgcatcgtgcatgtgctatgataaaccaacatatatatctttagtttatatacattgcgaattgcatcgtgcatgtgctatgataaaccaatggcttccattccatgttcctctttgagtggccacttcagttgtgcatactgtcctggcttagttaggaggtgcatacagatgggcatttgatgcccacttgggccttttgagggagcgccttgtaaaccataatatgcggtgctccccaagcagctctagacattccatcaaattcttatgttcatactatttcttgctacagttttccatccacaatccaaactacacccttgcattttgccttagtcattaaagttaactgtttgtgtttatttcatcactattgtagaatttcattctgtcttaatgagtagccatcatagctgtggaagttttgaaatttgcttgggcttgggtacctcatcttctataacaagaaatgataccaagatgttctagatgtacatcttctacgtgttcctgcagtctttagttccatacaactatctctatttcatatttggtcatcagaaagtggtgttgaacatgcattaagattgttcaattcggttcctttggggagctcatgctatttgcctttttgagtagccattctagttatacatgctatcttggcttagttagagggcatatagagaggctattgactgctttagctgttttaagtacaactcccttctttatagggattgttgaacagccttgcacattgtgcattaagcttttttttttcaattgctttgggctgcaaatactgtttgcctttttgagtagccactgtagttgttcatgctatcttggcttagttatggggcatatagagatgttattgactgctttggctgctctaagtgcaagtcccttctttctgggtttgttcattgatcggccttgcatattccagcatttctctcttatcaatccatttcctttaaaattcgtgagatttactaatattaagattttatatatatatatatatatatatatatatagtgttcaaagattaaaagatctgaatgactaaaattagtttgcagaccacttgtataagttagtactgtactataatgttctatgcagcttggcaccactgcctcatgaataaccagctgcttagtatatttgcatttggttcagactggggcacatagcaaatagaatcttttttgagggaaggggcctgattttctgttcatcccttcttagatagattctgatatgaagtggtgtttcttttttcttttttcttatgtacgaagactatgatgttgttaactgtatgtattatgcccttctacatgcatatgctctagattagtgtgacacatctcaacccatttcattcttttttatgctttgacatttattttgcagcaaggtctcgccctgcaccacgtgctgctcccgtgaggaaccctccgcagccaggtattgatttgtccatgttggggtttcacaaattttgtgttattctttactgttctaaagtgttttgtcttgtcaagttgtgccttatgttctcattgtacctgtataatctgtactggttttaaagtgttttgtcttgtcaagttgtgtcttgtgttctttgattgacatctgtaatttgttcattgcagcaaggcaggctcctcctccagctcctgcccagaacggaggtggctctatcctgggaggaattggttccactattgctcaaggtatcatcattttgcttcattttaattgaaatgaatagcattatattaacaatgcagtttctaataagtacttctttgcacatatatgcaggcatggcttttggtactggtagtgccatggcacatagggctgttgatgctgtaatgggtccccgtaccattcagcatgagactgttgtctccgaggctgctgcctctgccaccccaatggccaacgccactccatctgactcatgcagcatccattccaaggccttccaagacgtatgttttcctgcccattttggcttagttatcttttgttgcctggctgcttccatctactcgtgcttacatttcccatgcagccatgagaatgaatttgatgatgcttcatttatctattttaattttactcttaaaactctatctggcattctggcttgcatgttgatccccaccattctctggttaccatcatctgattaattctatgtgaacagaagaaagcatcctcatttcttcatagtgttaacatagattgaattgataagaattaatttgtatatgcatgctactacctgtaactaacaagagtctacgcactagcatggaggttgtcctaaatcctaattattggtttttttgtattgcagtgcatcaacaactatggaagtgacatcagcaagtgccaattctacctggatatgctgaacgagtgccgccgtggtggtgcatctgcttaggctggtggccttttggaacttttattaattgggcctcgcgttactctcatgattatacatgaataacttggcaaattcatgaacttggtgccactgcttatggctgtactctgataatcgttggtacgcttgggtttgtggtatgctacttctgggagtaggtacattctactatcctaaaatgctagaactgcctacattgctctgggtgtcataaatattatggaattaaacccgttatttctcgaaacgctccgttgtttcatgtttcgtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0685500, RefSeq:Os03g0685500