Os03g0689300

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0689300| Description = Plasma membrane H+ ATPase (EC 3.6.3.6) (H-ATPase)| Version = NM_001057482.1 GI:115454692 GeneID:4333770| Length = 71...")
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Gene Name

Os03g0689300

Description

Plasma membrane H+ ATPase (EC 3.6.3.6) (H-ATPase)

Version

NM_001057482.1 GI:115454692 GeneID:4333770

Length

7136 bp

Definition

Oryza sativa Japonica Group Os03g0689300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28270593..28277728

Sequence Coding Region

28270870..28270923,28271816..28271935,28272063..28272161,28272309..28272446,28272550..28272684
,28272774..28272951,28273056..28273264,28273357..28273476,28273545..28273664
,28273745..28273867,28273967..28274071,28274230..28274374,28275124..28275288
,28275376..28275614,28275702..28275734,28276022..28276103,28276213..28276373
,28276487..28276672,28276760..28276942,28277039..28277217,28277475..28277571

Expression

GEO Profiles:Os03g0689300

Genome Context

<gbrowseImage1> name=NC_008396:28270593..28277728 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28270593..28277728 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggacaagggaggcctcgatgccgtcctcaaggagtcggtcgacttggagaacatcccgatcgaagaagtattccagaatttgaaatgctgccgacaggggctcacttccgaagaggcgcagctgcgcctgcaactttttggtccgaacaagctcgaggagaaggaggagagcaaattcctcaagttcttggggttcatgtggaatccgctgtcatgggtcatggaggctgcagctatcatggccattgcattagccaatggtggggggaagccaccagattggcaggactttgttggtatcatcacactgctacttatcaactcaactatcagtttcattgaggaaaacaatgctggcaatgctgctgctgcgctcatggcgcgtcttgcgccaaaagccaaggtgctccgaaatggtagttggactgaggaagaggcagccatccttgtgcctggggacatcatcagtattaagctgggagatatcattcccgcagatgctcgcctcctggaaggagatcctttgaagattgatcagtctgcgctgactggagagtcattgccagccaccaaaggtcctggtgacggtgtttactctggttcaacggttaagcagggtgagattgaggctgttgtgattgcaactggtgtgcacactttctttggaaaggctgcacatcttgttgattccaccaatcaagttggccatttccaaaaggttttaacagctatcgggaatttttgcatttgctcaattgctgtggggatgtttgttgagatcattgtcatgtaccctatccagcacaggccataccgccctgggattgacaacctattggtgcttctcattggaggcattcctatagcaatgcccacagtcttatctgtaaccatggcaatagggtctcatcgcttgtctcagcagggagctataacaaagagaatgactgcaattgaagagatggctggcatggatgttctttgcagtgataaaacaggaactctgactttaaataagctcacagtggacaagaatctcattgagatttttgaaagaggagtcactcaggaccaagtaattctgatggctgctagagcatcccgaacagaaaatcaagatgctattgatactgcaatagtcgggatgctcgctgatccaaaagaggcacgtgctggtattcaagaggttcacttcctgccattcaatccgactgacaagagaactgcattgacatacattgatagtgatggaaagatgtaccgtgttagtaaaggcgcaccagagcagattctcaacctggcacacaacaagacacagatagaacgacgagtccatgctgtaattgataagtttgcagaacgtggacttcgatcacttgctgtagcatatcaggaagttccagatggaaggaaagagagtcctggtgggccatggcgctttgttgctctccttccactctttgatcctccaaggcatgatagtgcagaaacaattcgaagggcacttaaccttggtgtaaatgttaagatgatcacaggtgaccaactagcgattgggaaagaaacagggcgtcgtctaggaatgggtacaaacatgtacccttcatctgctttgttgggacagaacaaggatgagtctgttgctgctttaccagttgacgatctaatcgagaaagctgatggttttgctggtgtattcccagagcacaagtatgagattgtaaaacgtctgcaagcacggaagcacatctgtggaatgactggtgatggtgtaaacgatgctccagccctaaagaaagctgatattggtatagcagttgctgatgcgactgatgcagcaaggagtgcatctgatattgtactcacagaacctggcttgagtgtgatcattagtgctgttcttaccagtcgggcgattttccagcgaatgaagaactacactatatatgctgtctcgattacaatacgtattgtgtttgggtttatgctgcttgcccttatatgggagtttgatttcccgccatttatggttctgatcattgcaattctgaatgatggtaccataatgactatatctaaggatctagtaaagccttctccactacctgacagctggaagttggctgaaattttcacaactggagttgtgctgggtggatacttggcaatgatgactgttatattcttctgggctgcatacaagaccaactttttccctaggatctttcacgtcgaaagccttgagaagacagctcaagatgactaccaaaagcttgcatctgctgtatatcttcaagttagcaccatcagccaagctcttatctttgtcacaaggtctcgcagctggtcatttatcgaacgccctggctttctacttgtctttgctttcttcgttgcacagctgatagctacattgatagctgtttatgctaactgggcattcacttcaatcaaaggcattggatggggctgggccggtatcgtgtggctctacaatctcgttttctacttcccgctcgatatcatcaagttcctcatccgatatgctctgagtgggaaagcatgggatcttgtcattgagcagagaattgcgtttacaaggaagaaggattttggcaaggaagagagggaactcaagtgggcacatgcacataggacactccatggcctgcagccaccggatgcgaagcccttcccagagaagaccggctacagtgagctgaatcagatggcggaagaggcgaaacggagggccgagattgcaaggctcagggagcttcatacgctgaaggggcatgtggagtcagttgtgaagctgaagggcctggacattgataccattcaccagtcctacacagtgtga</cdnaseq>

Protein Sequence

<aaseq>MAEDKGGLDAVLKESVDLENIPIEEVFQNLKCCRQGLTSEEAQL RLQLFGPNKLEEKEESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVG IITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRNGSWTEEEAAILVPGDIISI KLGDIIPADARLLEGDPLKIDQSALTGESLPATKGPGDGVYSGSTVKQGEIEAVVIAT GVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMFVEIIVMYPIQHRPYRP GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK TGTLTLNKLTVDKNLIEIFERGVTQDQVILMAARASRTENQDAIDTAIVGMLADPKEA RAGIQEVHFLPFNPTDKRTALTYIDSDGKMYRVSKGAPEQILNLAHNKTQIERRVHAV IDKFAERGLRSLAVAYQEVPDGRKESPGGPWRFVALLPLFDPPRHDSAETIRRALNLG VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESVAALPVDDLIEKADGFA GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL TEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLLALIWEFDFPPFMVLI IAILNDGTIMTISKDLVKPSPLPDSWKLAEIFTTGVVLGGYLAMMTVIFFWAAYKTNF FPRIFHVESLEKTAQDDYQKLASAVYLQVSTISQALIFVTRSRSWSFIERPGFLLVFA FFVAQLIATLIAVYANWAFTSIKGIGWGWAGIVWLYNLVFYFPLDIIKFLIRYALSGK AWDLVIEQRIAFTRKKDFGKEERELKWAHAHRTLHGLQPPDAKPFPEKTGYSELNQMA EEAKRRAEIARLRELHTLKGHVESVVKLKGLDIDTIHQSYTV</aaseq>

Gene Sequence

<dnaseqindica>278..331#1224..1343#1471..1569#1717..1854#1958..2092#2182..2359#2464..2672#2765..2884#2953..3072#3153..3275#3375..3479#3638..3782#4532..4696#4784..5022#5110..5142#5430..5511#5621..5781#5895..6080#6168..6350#6447..6625#6883..6979#tttccatttcttgccgttttcttccacattcttctctgctgctggtgtctcttgtgggccgcgtggaaagccactctctcctcctctttgacctcgctatctatccatctactgcagtttgctcactggaaatgtttttcgcgtataaatagctgggaggagaggcaaggggaccggaaagagtgcgagaaagaaagaaaggcgagttctttttggcaagggagggagggggggcactcgttgagggtgggtttcagaggtgtgggaggtcgcctccatggcggaggacaagggaggcctcgatgccgtcctcaaggagtcggtcgacttggtaacgccctcatctttggatgggatggttgttcacttgttcttggggtgttcttgggtttagcaccgggggtttcttgggttttggaggatgatttttggcgtggttgtggtttcttgggatggatggatggttttttcagggtggcgagattggtttcggttcttgctgttctttggtttcaaggatttcagtttcagggtggcctcggtttgtggtagagatgattggtctctttcacgcgcttctgttgttcggagggatcttggtttctgcatgttcttggatttgatggatacccgtttgtttgttcttgcatgtgtgttagtagttcgtggagtcgagtcagagttcagaaaaatgcagattttttttgtgtgtgcgcgtgtgttcgaagttcttgtttggttggtgggctgtgcagcaaaatcggcatgaactagttgtttcttgtgaattccagaatgtcaggtgatattcttggaataaaggttcatttttttatattcggttactgttcttgtcactctctgatctctgattattatattcgacggtaggatatcgtctttcccccacatgcagatgttgactgcttgctttagttttctcgtgtgtgtgttttttttactcggttcatatcgttttatggttatttgcatttgaagattgattcttgtttattggaatctgttacagttcttggttccgtggaaattggaatcataggtctcatacttgaatgttgaaaacatattttattattggtagtcaaatctttattttgtttttcttgggttaccatcatgacaattgcgtgcaggttctggtaactttctttgtgccgatttttttaagaataaaaaaaaactaaaatttcaattatttacaggagaacatcccgatcgaagaagtattccagaatttgaaatgctgccgacaggggctcacttccgaagaggcgcagctgcgcctgcaactttttggtccgaacaagctcgaggagaaggaggttgagttccttcatctcatcttgccattgctatcaaagatttacctttttcttgttggaaagtaatactataattcagttcatttgcgttacgtttccgcttatgctgggtcattgatggttgcaggagagcaaattcctcaagttcttggggttcatgtggaatccgctgtcatgggtcatggaggctgcagctatcatggccattgcattagccaatggtggggtaagtacttaggagtcttagacataatgacaaaatctgttactcctatttagtacttggcttctgtccttttctctgttgatgaatgcagggcaactgtgtaagtggtcccgttccttttaacaatatatgtggtgttatcatcaggggaagccaccagattggcaggactttgttggtatcatcacactgctacttatcaactcaactatcagtttcattgaggaaaacaatgctggcaatgctgctgctgcgctcatggcgcgtcttgcgccaaaagccaaggtctttcttcaatctccacttttattatgagatatccactctattgtccatattgaggtggagcacttttgaatattgaaactcatgttgtgttggttgttaggtgctccgaaatggtagttggactgaggaagaggcagccatccttgtgcctggggacatcatcagtattaagctgggagatatcattcccgcagatgctcgcctcctggaaggagatcctttgaagattgatcaggttctttctgcaattcacattttaaagtcattttcagtctttaagtaattgaggtttactcatgtcatgatgtgatctattgttaatagtctgcgctgactggagagtcattgccagccaccaaaggtcctggtgacggtgtttactctggttcaacggttaagcagggtgagattgaggctgttgtgattgcaactggtgtgcacactttctttggaaaggctgcacatcttgttgattccaccaatcaagttggccatttccaaaaggcaagattgagaagcctcacttctgttcatgtctcatgttgttagccatctgaataatcaatttatcactcattcttgcattcatttttatccactttgtgcaggttttaacagctatcgggaatttttgcatttgctcaattgctgtggggatgtttgttgagatcattgtcatgtaccctatccagcacaggccataccgccctgggattgacaacctattggtgcttctcattggaggcattcctatagcaatgcccacagtcttatctgtaaccatggcaatagggtctcatcgcttgtctcagcaggtttgtatctttttaggcacactgttaaacatagtgtagccataccagaacttctgtactataatacttgattctgaattttatttctgcagggagctataacaaagagaatgactgcaattgaagagatggctggcatggatgttctttgcagtgataaaacaggaactctgactttaaataagctcacagtggacaagaatctcattgaggtaaactcaattattttttcccttaatttaaatttaattaaagcacttatttacatctttttatccagatttttgaaagaggagtcactcaggaccaagtaattctgatggctgctagagcatcccgaacagaaaatcaagatgctattgatactgcaatagtcgggatgctcgctgatccaaaagaggtacatcgatttgtcagataggggaggaacgactatcttgtttatttgaggaattaaacaccaggaaatatttcctgcaggcacgtgctggtattcaagaggttcacttcctgccattcaatccgactgacaagagaactgcattgacatacattgatagtgatggaaagatgtaccgtgttagtaaaggcgcaccagagcaggtacaacaaaaatcatctgcagatatgttaaaaaagctttgctggaaatttccatttatatgatggagttattgattgatttcataaattgacatgcagattctcaacctggcacacaacaagacacagatagaacgacgagtccatgctgtaattgataagtttgcagaacgtggacttcgatcacttgctgtagcatatcaggttagcacttcttcggatactctttgcacaatttgaatgttttaacattttgagttaattaagattaggaactatccagagtcattatatatgttgaaaaatcattgttccctgggccagtttaattttcattatggtctcctttccctgtcatgtaggaagttccagatggaaggaaagagagtcctggtgggccatggcgctttgttgctctccttccactctttgatcctccaaggcatgatagtgcagaaacaattcgaagggcacttaaccttggtgtaaatgttaagatgatcacaggtactcttctgattgaaaaaaaaaatctagatggtttatttgttatatatattttttattattcttttctggtcgttgtggtggtgagagggtactccatgtccagttattatatggtgcatcagttactagaatcctaatctactccatccgtcccaaaatataagagattttgggtggatatgacacttcctaggacaatgaatctggacagagagtcacattcacccaaaatcccttatattttgggacggagggagtacaataggaagaacaactagcataaatttgcagtactgcaatctgttcaataagaaatgcatgattatgatgtatcataaagaagaaactcaattttcatcattaaaaaaaaataaaccatccattgctcttctgtcattgtttggagccatggggaccatcaccagttcaaagctgcagatagtggtctttgtagcggttccagtcttcaccattgcttatatgtatccatttacaggtctaacttaatgtttatagagactctttcttgtttatataacttatttaaattatttttgtgaggataatttatatttaattctgattcaacatttttttaaaattaacactgtaaacatgcctaaaaaattgtggtaagttgagagttggtctaccaagtgtcattactggatcatgtcatggaaatttattgcaattttgttaatctttctgaattatgggaattaaaattatttctttatcttcaggtgaccaactagcgattgggaaagaaacagggcgtcgtctaggaatgggtacaaacatgtacccttcatctgctttgttgggacagaacaaggatgagtctgttgctgctttaccagttgacgatctaatcgagaaagctgatggttttgctggtgtattcccaggtttgtatgcaatcaattgcagaataaaaaccaaatggttgaaagtcacaaagaaaaatataactgtgaagttctctcttttctcagagcacaagtatgagattgtaaaacgtctgcaagcacggaagcacatctgtggaatgactggtgatggtgtaaacgatgctccagccctaaagaaagctgatattggtatagcagttgctgatgcgactgatgcagcaaggagtgcatctgatattgtactcacagaacctggcttgagtgtgatcattagtgctgttcttaccagtcgggcgattttccagcgaatgaagaactacactgtaagtcagatggaaacaaacatagtgtcttttaatattctgcctttttccttgggttattttgctaattcatttccatgtttgcagatatatgctgtctcgattacaatacgtattgtggtatgttttctttactggagaactagaaattatggatttcctctcatttggtaaataaatagttgattgttctcgtaggtattttagtttaactacaggtcaatcagaactaaccattcagataaatttaacagaactaagcactaaatgattccagtgtataaccttttgtacacattaactttgatgatccccaatatgatgttttcatcttactatgccaaacaatgtgtatcaactttatgttttagctagcacttaatgtatattgactgctcttttgacagtttgggtttatgctgcttgcccttatatgggagtttgatttcccgccatttatggttctgatcattgcaattctgaatgatggtatgtcacattcttgttccctccatccctgctatctctcctaaaacttcagtagtaagtagaaactattttcatgatgttcacttcaaccattttctggcacaaacaggtaccataatgactatatctaaggatctagtaaagccttctccactacctgacagctggaagttggctgaaattttcacaactggagttgtgctgggtggatacttggcaatgatgactgttatattcttctgggctgcatacaagaccaactttttccctgtaagaagtgccaaaaaatgataacaaatggttctaattgaactgttggcctaccacattttgtgattgattcttgtattcgctttgaaacttaatgttgcattgattttcagaggatctttcacgtcgaaagccttgagaagacagctcaagatgactaccaaaagcttgcatctgctgtatatcttcaagttagcaccatcagccaagctcttatctttgtcacaaggtctcgcagctggtcatttatcgaacgccctggctttctacttgtctttgctttcttcgttgcacagctggtatgctctctccctattaccgcaaactgataaattctcttctgggtagaattgtgttaatctaactttcttccccttcaaatgcagatagctacattgatagctgtttatgctaactgggcattcacttcaatcaaaggcattggatggggctgggccggtatcgtgtggctctacaatctcgttttctacttcccgctcgatatcatcaagttcctcatccgatatgctctgagtgggaaagcatgggatcttgtcattgagcagagagtaatgctaatgcaccctgcatagttgtcttggctccttacctatttcgactgaatttccatgcatttgtgactaatggcccatcgatttcgacagattgcgtttacaaggaagaaggattttggcaaggaagagagggaactcaagtgggcacatgcacataggacactccatggcctgcagccaccggatgcgaagcccttcccagagaagaccggctacagtgagctgaatcagatggcggaagaggcgaaacggagggccgagattgcaaggtaggacctaaatctgcagtagacacttgtataattcttttccatgatctgtcaccttaagaatcatatagaagcaccatgtcctttatattgcatcaattctcagttgcttttgccatgttccttccaagatcaagaagcatctccctttctagctgcacaatgccaatttgcatccccctggaacacgtggcgtgaaaacgatgtaaagctaactaactatgtgcttgttcttgctgttgatgctacacttgcaggctcagggagcttcatacgctgaaggggcatgtggagtcagttgtgaagctgaagggcctggacattgataccattcaccagtcctacacagtgtgatagactcttatctaacaagagtaatatggttgctgcagaggaactgtttcgtttcatctaattagtagtttttatctcctctcagctaacataaatgtaatcaaccaacagttcatacaatctataaatcaaatcatcaaaggggattgttgagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0689300, RefSeq:Os03g0689300