Os03g0691500

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0691500| Description = Conserved hypothetical protein| Version = NM_001057490.2 GI:297601508 GeneID:4333781| Length = 7496 bp| Definition ...")
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Gene Name

Os03g0691500

Description

Conserved hypothetical protein

Version

NM_001057490.2 GI:297601508 GeneID:4333781

Length

7496 bp

Definition

Oryza sativa Japonica Group Os03g0691500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28412669..28420164

Sequence Coding Region

28412669..28412708,28412826..28416077,28416946..28416999,28417240..28417338,28417414..28417478
,28417942..28418041,28418792..28418874,28418960..28419035,28419386..28420164

Expression

GEO Profiles:Os03g0691500

Genome Context

<gbrowseImage1> name=NC_008396:28412669..28420164 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28412669..28420164 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcccgctccttcttcccgacctgctcctccctcaaagtggaaatggaggagatgtgcagggagatggacgagctgaggtcggaggtggaggcgctcacggcagagtgccgcgccaaggcggagctcgccgaggggctcaagcgggcgggcgccgagcaggcggcgcggctccgggaggcgagggcggaggcggagaggcaggcgcgggaggtcgccgcccgggacgaggagatctcctcctcgggggaggcgcgccgggagctggaggccaggctcgcggagaaggagcaggcgctgcggcacctctgcgcggcgcacgaggggctcaggagcagcgccagggagaggagcgatgccctggaggcggagaagcgggagctcgtcgcggcgctggaggagtccgaggcgaggcggctcgagcaggaggcggccgcgcgctcgtgcggcgaggaggttgcccggctcaggaggttgctgtcggagaaggaaaagaagtgctcggaggctgagcagagggcattggcaccgaaggaggtgatgatgagggacgatatgctgctgaaaatggaggaccagaaggccgccgtcgaggggaagctcaagtggaaatctgagcagtttaggcacctcgaggatgcactcaaaaaggtccaggatgaattcagggccgcgaagaaggaatggggctctgatagatcaatgttggttgatcagattggcactcttgaggtcaatttggattccaagaccagaatggctgaggattttcggtcaaggctcgagatgtgcagccaggcattagcccatgaggaaggccgccggaagctgctcgaggcggagatgtctgaattgaaacacttgtatggtaatgtggtctccgattatgaagaggcgaggtccacaattgagtcgcttgccgcaaagcgggatggggagatcgcatcgttgagaagctcactggctgagaaggtcacattgctcaaggaaatggagtatgggaaggcacgtcttgagcaagaaaatgaggatatgcgatcttcgttgaaggaacaccaggaggctcagattggtggtgcagatgctgtagtttcattgaaggttctgcagcagaagttccgagctctagaacagacgcatagaaactgcattgataagctgagagataaagaggcagaatggaaaacacagatggagaagcttgggagtgagctggatggatgcttgtcacagttagattctaaagatacacttatcaagcaaatgcagattgagcttctgagcagttatagctccctggagatgcaagctgtgcagaattgggaagcttcagtagctcttgttattgtagaatcaaaactttatgattcttgctcatattttgaaacgattcaactggatatgcagaagaactgtgcacaacttgagcacaattttgctgctgcaagaaagcagttagaggaagataactgtgccattgctcaatctcaagctgagcgggcacaacaagttgaggtaatagcaacattgcatcaaagaattgagcagcttgaacacatggaaaaggaacgtgaagagatgcaaaggcagcttgatacatacaatcttgacaatgcatcaagagatgttcactgcttaaaaggtgaatcttcagaagaggaaaaaggcctgcatgagaaactgcagaaagcattatctgatttggatgaagcatactctgcagtttctgagcgggagagtgagctgagccaaatagaaatcaatcttcataagcaaaaacaagcaatggagcatttggaagagctcaaactttctatggaaaatgaactaaagggctatatggatgagaacaatgtactgaaaagagatcttattgcaacaacagaaattgaaaagtccctaagagaagaaaaggagaaattactaggtgctctcaatgaagcaaactctgccctttctgagaagaactgtgaactgagacaatctgaaatcattcttcatcagcaaaagcaagcactagaacatttggaagaactgagagtcaatatggagactgaaatcaagggctacattgatgaaatttgtgtcctgaagagggatctagatgctacccatatggctaaaatagaagccgagaagacttacagtgaagaaaatgagaagttgctatgtgctcttgatgaagtaaactgttgtcttttggacaagaagaatgagcttgaccaagtcacagaaaatcttcatcagcaaatgcaagcagtggaagaatttgaaaagttgagagttagtatggaaactgagctagggcgctacatggatgaaaactctgtgctaaagagtgatctggtttctgctcttaattccaaaatggatgctgaagagtctcttagggaagaaaaggataagttatgcagtataatagatgagaggtgcaggaatattgacgagcttcagcaacacatcgctgtgctggaagaagaaaatttagataaaaagcttgatgtggcaggtcttatcaagtcagaggctgacaggtccattcaagaagtcaatagaaagtactctgaaatcgttgaggtctttgacaaaaagcttttggaacttgaaacaaggctcagtttcttcgaacagaaatacacatgcagagagcaagaactcatggaaatgtttgatcaggaggaagctgattggtatacactaattgcagaaaaagaaaatgctatttctgaaattcaagaaaatgttgaatctgctcaagttgacattaagcacctagtcgaatctgcttcagaaaagctagcagaagttcaggttgaggttcggcaactatattgtttagcaggaaatcttaattcactcaatcttatccaagagcatgataatttgttcaaggacatgctcattgaagaatgtgaaagagagcttaaggcagtgcaagtaaatttagcgttggagaaacaacagtccaacaatttgaagaatgatcttgagcaactcaaagccaaggcaactgcagagatgttagaaaatgtaaaggagcatctggaagttgcaaataagctgagatctttggaggaaagaaaagaagtactggatgagcatgtaggagagttgaagtctaggacaaagaatatgtgcaatgcctttgttcaagagaggaaaaatttatttgatgagttgactggactggtcgataccattggagcagcaattcatgtagatgaagatctgatgacaagcttgacaaagatcatgcataaagttaataatgaagaagccttccggaattctatttcactagtttaccgagggagtgaaactgacaaaatcagaccagaatctcctggactgaagaacctgtggcctgtattctttaattactctttctcagtttatatggtcactgaatttttctcgtgcatctttatatgcatgattgtagcagcctactgccctttcataactgatgttcctgttatttcatccccaatgttcattgtgaggttaaattttaaggtagctgaagacaacatgaccaatatttgcttcagaaaagagggtctgcactggagcaaacagccaagaacagtccaagcttgctgcaaggaagtacttgtggctgatatccggcttgcaaacagacatgctggaatcgtggacaaggaatttcatattccattattttgtgagaaaaagattcaaataccacctgaatctgcttgctttattgaattccctgatgaatcattgccccatgaaacgctgcaagcaagctcttcggctgtccatctccatggccaccatggccgccttcgccgcttcttggccgccggccggttgcgcgccattgacgttcttggacatggagggcagcgggcgcaccggccacgccggcggtggcaggtcgcggcggcggtggcagcagcagcagcagcagcagctctggcggcggcggtcgtagaagcactggtgcgagtggctgccaccggcggcgagctcctgcgcgctgcgcgctcgccgcatgggcggcggcgcggcggggagcccggcggcgagccccatctcgctccgggcgcgccgcatcatcatcgggggcgccgcgacgggtgggtgtgggcggcgccgctgctggacgccggcggcggcgtcaacggcggtggagacgaacacccggaagctcgcggacggccgcgtcgccctgaggcggtcgtactcgtcgcgcatgtgggcgagctcctcgtcggaggtgaccgacaccaggaggtcctcgtcgggaccctcgtcggcgaggcggtacctgaccgccgtgacggcggcggcgccggccttctccgccagccgcgccgtcagctcgcggaagggacaccgcgcggcacggcgagggcgcgcgtctcgccgccgacgtaccggaggccgccgccggggccgcacggaacgaggcggccaccgtggctgcagagcagcctcatcatcgcctcctcctccttcgccgccgccatcggaacgattcgatcgatgatggatcgatctcggagtgtcagcaggtga</cdnaseq>

Protein Sequence

<aaseq>MSRSFFPTCSSLKVEMEEMCREMDELRSEVEALTAECRAKAELA EGLKRAGAEQAARLREARAEAERQAREVAARDEEISSSGEARRELEARLAEKEQALRH LCAAHEGLRSSARERSDALEAEKRELVAALEESEARRLEQEAAARSCGEEVARLRRLL SEKEKKCSEAEQRALAPKEVMMRDDMLLKMEDQKAAVEGKLKWKSEQFRHLEDALKKV QDEFRAAKKEWGSDRSMLVDQIGTLEVNLDSKTRMAEDFRSRLEMCSQALAHEEGRRK LLEAEMSELKHLYGNVVSDYEEARSTIESLAAKRDGEIASLRSSLAEKVTLLKEMEYG KARLEQENEDMRSSLKEHQEAQIGGADAVVSLKVLQQKFRALEQTHRNCIDKLRDKEA EWKTQMEKLGSELDGCLSQLDSKDTLIKQMQIELLSSYSSLEMQAVQNWEASVALVIV ESKLYDSCSYFETIQLDMQKNCAQLEHNFAAARKQLEEDNCAIAQSQAERAQQVEVIA TLHQRIEQLEHMEKEREEMQRQLDTYNLDNASRDVHCLKGESSEEEKGLHEKLQKALS DLDEAYSAVSERESELSQIEINLHKQKQAMEHLEELKLSMENELKGYMDENNVLKRDL IATTEIEKSLREEKEKLLGALNEANSALSEKNCELRQSEIILHQQKQALEHLEELRVN METEIKGYIDEICVLKRDLDATHMAKIEAEKTYSEENEKLLCALDEVNCCLLDKKNEL DQVTENLHQQMQAVEEFEKLRVSMETELGRYMDENSVLKSDLVSALNSKMDAEESLRE EKDKLCSIIDERCRNIDELQQHIAVLEEENLDKKLDVAGLIKSEADRSIQEVNRKYSE IVEVFDKKLLELETRLSFFEQKYTCREQELMEMFDQEEADWYTLIAEKENAISEIQEN VESAQVDIKHLVESASEKLAEVQVEVRQLYCLAGNLNSLNLIQEHDNLFKDMLIEECE RELKAVQVNLALEKQQSNNLKNDLEQLKAKATAEMLENVKEHLEVANKLRSLEERKEV LDEHVGELKSRTKNMCNAFVQERKNLFDELTGLVDTIGAAIHVDEDLMTSLTKIMHKV NNEEAFRNSISLVYRGSETDKIRPESPGLKNLWPVFFNYSFSVYMVTEFFSCIFICMI VAAYCPFITDVPVISSPMFIVRLNFKVAEDNMTNICFRKEGLHWSKQPRTVQACCKEV LVADIRLANRHAGIVDKEFHIPLFCEKKIQIPPESACFIEFPDESLPHETLQASSSAV HLHGHHGRLRRFLAAGRLRAIDVLGHGGQRAHRPRRRWQVAAAVAAAAAAAALAAAVV EALVRVAATGGELLRAARSPHGRRRGGEPGGEPHLAPGAPHHHRGRRDGWVWAAPLLD AGGGVNGGGDEHPEARGRPRRPEAVVLVAHVGELLVGGDRHQEVLVGTLVGEAVPDRR DGGGAGLLRQPRRQLAEGTPRGTARARVSPPTYRRPPPGPHGTRRPPWLQSSLIIASS SFAAAIGTIRSMMDRSRSVSR</aaseq>

Gene Sequence

<dnaseqindica>1..40#158..3409#4278..4331#4572..4670#4746..4810#5274..5373#6124..6206#6292..6367#6718..7496#atgtcccgctccttcttcccgacctgctcctccctcaaaggtgggtgggttgggtctggccgccgccgccgccgcggctttccgcgagattttggttgggttggaatgcgtactgtgcgttctcacattgggggttgatttgtgtgttttggtgcagtggaaatggaggagatgtgcagggagatggacgagctgaggtcggaggtggaggcgctcacggcagagtgccgcgccaaggcggagctcgccgaggggctcaagcgggcgggcgccgagcaggcggcgcggctccgggaggcgagggcggaggcggagaggcaggcgcgggaggtcgccgcccgggacgaggagatctcctcctcgggggaggcgcgccgggagctggaggccaggctcgcggagaaggagcaggcgctgcggcacctctgcgcggcgcacgaggggctcaggagcagcgccagggagaggagcgatgccctggaggcggagaagcgggagctcgtcgcggcgctggaggagtccgaggcgaggcggctcgagcaggaggcggccgcgcgctcgtgcggcgaggaggttgcccggctcaggaggttgctgtcggagaaggaaaagaagtgctcggaggctgagcagagggcattggcaccgaaggaggtgatgatgagggacgatatgctgctgaaaatggaggaccagaaggccgccgtcgaggggaagctcaagtggaaatctgagcagtttaggcacctcgaggatgcactcaaaaaggtccaggatgaattcagggccgcgaagaaggaatggggctctgatagatcaatgttggttgatcagattggcactcttgaggtcaatttggattccaagaccagaatggctgaggattttcggtcaaggctcgagatgtgcagccaggcattagcccatgaggaaggccgccggaagctgctcgaggcggagatgtctgaattgaaacacttgtatggtaatgtggtctccgattatgaagaggcgaggtccacaattgagtcgcttgccgcaaagcgggatggggagatcgcatcgttgagaagctcactggctgagaaggtcacattgctcaaggaaatggagtatgggaaggcacgtcttgagcaagaaaatgaggatatgcgatcttcgttgaaggaacaccaggaggctcagattggtggtgcagatgctgtagtttcattgaaggttctgcagcagaagttccgagctctagaacagacgcatagaaactgcattgataagctgagagataaagaggcagaatggaaaacacagatggagaagcttgggagtgagctggatggatgcttgtcacagttagattctaaagatacacttatcaagcaaatgcagattgagcttctgagcagttatagctccctggagatgcaagctgtgcagaattgggaagcttcagtagctcttgttattgtagaatcaaaactttatgattcttgctcatattttgaaacgattcaactggatatgcagaagaactgtgcacaacttgagcacaattttgctgctgcaagaaagcagttagaggaagataactgtgccattgctcaatctcaagctgagcgggcacaacaagttgaggtaatagcaacattgcatcaaagaattgagcagcttgaacacatggaaaaggaacgtgaagagatgcaaaggcagcttgatacatacaatcttgacaatgcatcaagagatgttcactgcttaaaaggtgaatcttcagaagaggaaaaaggcctgcatgagaaactgcagaaagcattatctgatttggatgaagcatactctgcagtttctgagcgggagagtgagctgagccaaatagaaatcaatcttcataagcaaaaacaagcaatggagcatttggaagagctcaaactttctatggaaaatgaactaaagggctatatggatgagaacaatgtactgaaaagagatcttattgcaacaacagaaattgaaaagtccctaagagaagaaaaggagaaattactaggtgctctcaatgaagcaaactctgccctttctgagaagaactgtgaactgagacaatctgaaatcattcttcatcagcaaaagcaagcactagaacatttggaagaactgagagtcaatatggagactgaaatcaagggctacattgatgaaatttgtgtcctgaagagggatctagatgctacccatatggctaaaatagaagccgagaagacttacagtgaagaaaatgagaagttgctatgtgctcttgatgaagtaaactgttgtcttttggacaagaagaatgagcttgaccaagtcacagaaaatcttcatcagcaaatgcaagcagtggaagaatttgaaaagttgagagttagtatggaaactgagctagggcgctacatggatgaaaactctgtgctaaagagtgatctggtttctgctcttaattccaaaatggatgctgaagagtctcttagggaagaaaaggataagttatgcagtataatagatgagaggtgcaggaatattgacgagcttcagcaacacatcgctgtgctggaagaagaaaatttagataaaaagcttgatgtggcaggtcttatcaagtcagaggctgacaggtccattcaagaagtcaatagaaagtactctgaaatcgttgaggtctttgacaaaaagcttttggaacttgaaacaaggctcagtttcttcgaacagaaatacacatgcagagagcaagaactcatggaaatgtttgatcaggaggaagctgattggtatacactaattgcagaaaaagaaaatgctatttctgaaattcaagaaaatgttgaatctgctcaagttgacattaagcacctagtcgaatctgcttcagaaaagctagcagaagttcaggttgaggttcggcaactatattgtttagcaggaaatcttaattcactcaatcttatccaagagcatgataatttgttcaaggacatgctcattgaagaatgtgaaagagagcttaaggcagtgcaagtaaatttagcgttggagaaacaacagtccaacaatttgaagaatgatcttgagcaactcaaagccaaggcaactgcagagatgttagaaaatgtaaaggagcatctggaagttgcaaataagctgagatctttggaggaaagaaaagaagtactggatgagcatgtaggagagttgaagtctaggacaaagaatatgtgcaatgcctttgttcaagagaggaaaaatttatttgatgagttgactggactggtcgataccattggagcagcaattcatgtagatgaagatctgatgacaagcttgacaaagatcatgcataaagttaataatgaagaagccttccggaattctagtagcaaagaaatgcttagctcggagaatataaatgcgaggaattctgcacccttggtcaggaataaatctgtacagctcccagatagaagattaccattgaaggagcacaactattagccttcgtagctgaggacagattgtgtactgacattgttgttatcttagcatcctgtctctctggatccacataggctttacatgctacctgtagatttgtgctgccatttgtgttgtgttgtttatacgcaatggctatgctcatcctacatttcttatgtatcagctttacctttaaactaatttattattttgactacctagaggaatgagattattcctttaaaacatgtgctcatttcattattttaatcaccatcagctgtgttgtgatcagcagttgattgcttagatgaatatttggcatcagatgtaaatctgctagttacttttaattgcttgtgcattttcctaagctcgtaaacagcaagttctgaaatgttcatgttaatacacctaagttgacttgtttgaattgttgaaaagccactagaatagctctgaaaaaaattgagagaatatccaaatgaggtgctgcatcataagaatttttcagtagcaagtagattctcccattcccttgtctatgaggaatctgctgtcagttggtatgtaagattacgtatgaaaatttttgtttgtgcaattacgtctgttgtaaatttagtgaagtttttttccttaaaatttctcatttgtaagagcaacctgcgttgcttatcatagtgattttctctgggacagaaataactagatagcataccaaggcttcaactggtaaggtaagcagttatttttacatgttacagtttcactagtttaccgagggagtgaaactgacaaaatcagaccagaatctcctggtaaggtcatgcactcatgcaagtaaagaagagggctgacttgttacatggttctctagtcctttgcaatatactgtcatctctcaagatgcatagtttgtggagctgtattcctaacaagatgaatatcttcattggttcctggtgattcaactatatgtccacttttgaatgaatttgaacatttgaaataacgtgtctggttgggtgatgaactcaatctttgattcttttctgtaggactgaagaacctgtggcctgtattctttaattactctttctcagtttatatggtcactgaatttttctcgtgcatctttatatgcatgattgtagcaggtttgcctgtttgaattcctatcgaactgtgatctgctagttgttaaatattcagattatttttttgttctgtagcctactgccctttcataactgatgttcctgttatttcatccccaatgttcattgtgaggttaaatgtaagttttgtggtgacgttgtcaatctgtaggttcttatttgaacttgtgaaattttgacataccaggatgctacctgctattatacgagattaggcgctcagttgtgtgggttttcttccctgttatcattgagtcaaaatggccgtaacatcttgaatcactagcaactggccaatccaaaactctaatagtgcttcctattttctgcaggaattcactgattaagtaggagttgtaatcactccgttatttgatacatatctcaggaccattatgtcaacagttaatctgatctgcaggttatattgctctataggcttataatgcagagttgcgacccatacacataatttcagatgaaaatacatctattttgtcttccttctggaatacaacctgagattttgtatcaactggtctgatcataccctttgtgctcttggacagggcttaactgaagtttaaggtagctgaagacaacatgaccaatatttgcttcagaaaagagggtctgcactggagcaaacagccaagaacagtccaagcttgctgcaaggaaggtaaaagccaatgataatatcatttgatcattacatatgctctgcatcatgtctccatcatgcaaggagaatcgttcatcgatccttatttcagtcgttttgctgaattgttttcaacaatttttatcgagtgcaaatcaatttctgtttggccttagaataactgactaaagtttttgccattttctaatgtaaagttatgacagcctaagatattgcatgttgtacagcctaagaatccccttttacacgttacagtttcactcattttaaggagatatttgatgatgctaaaaaaaccagatgaaaaccttcttcccaggagaatgcaaaccagtaagaactgcatccttactaaccggcctttggtctgttgaaacatactggggccatacctcaagatccgaagcttgtgcatctgtattaaattggtttgcagctctgacatgggcaaaatctgaaaagcattgttgttggttgaatactggagcgaagtggagaaaaactgctgaagaaatcaatcataatgtgtgggggataatacaccgtctgaatggctgttttgttcattctgaaccttctcctggatacaattactttcagtattgtatagaactgaggacatattaataggctctttggtctaattaaatcaaggtaacttcttcgctgatattcagtctgagtatgcagtgtttgtggtctaaggaaatcaagataacttcacttataatctgtctttaaatgcagtacttgtggctgatatccggcttgcaaacagacatgctggaatcgtggacaaggaatttcatattccattattttgtgagaaagtaagcttctgcactcagctgattgcgtaattaccttctcgttttgcgtaaaacacttaatctttatcttcatgtttatcttcagaagattcaaataccacctgaatctgcttgctttattgaattccctgatgaatcattgccccatgaaacgctgcaaggttgtcaagcaatcataattatctatgaatttttgaaacaatcaacagcacacatcagtcttaaactgcccgtaccattgttcagaatttacttcatttatttatttacagtcaaagaatcaatcttaatccatcaattcatcccgtggtcaaaactaaaaccacaaatcgtccaaactaaatattggacgaagatcaggatgttgcaatggcaattacaagcatttacagcttcagttctgatttctgaagatagaaattgaatcttctcaatttctgtaaatattatctacaagaggcatggttactggttacaaagactaagccctaactatcactccaactcccagcaagctcttcggctgtccatctccatggccaccatggccgccttcgccgcttcttggccgccggccggttgcgcgccattgacgttcttggacatggagggcagcgggcgcaccggccacgccggcggtggcaggtcgcggcggcggtggcagcagcagcagcagcagcagctctggcggcggcggtcgtagaagcactggtgcgagtggctgccaccggcggcgagctcctgcgcgctgcgcgctcgccgcatgggcggcggcgcggcggggagcccggcggcgagccccatctcgctccgggcgcgccgcatcatcatcgggggcgccgcgacgggtgggtgtgggcggcgccgctgctggacgccggcggcggcgtcaacggcggtggagacgaacacccggaagctcgcggacggccgcgtcgccctgaggcggtcgtactcgtcgcgcatgtgggcgagctcctcgtcggaggtgaccgacaccaggaggtcctcgtcgggaccctcgtcggcgaggcggtacctgaccgccgtgacggcggcggcgccggccttctccgccagccgcgccgtcagctcgcggaagggacaccgcgcggcacggcgagggcgcgcgtctcgccgccgacgtaccggaggccgccgccggggccgcacggaacgaggcggccaccgtggctgcagagcagcctcatcatcgcctcctcctccttcgccgccgccatcggaacgattcgatcgatgatggatcgatctcggagtgtcagcaggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0691500, RefSeq:Os03g0691500