Os03g0691800

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0691800| Description = Similar to HIPL1 protein precursor| Version = NM_001057492.1 GI:115454712 GeneID:4333783| Length = 5425 bp| Definit...")
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Gene Name

Os03g0691800

Description

Similar to HIPL1 protein precursor

Version

NM_001057492.1 GI:115454712 GeneID:4333783

Length

5425 bp

Definition

Oryza sativa Japonica Group Os03g0691800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28429446..28434870

Sequence Coding Region

28429468..28429573,28429666..28429835,28430676..28431467,28431648..28431864,28432438..28432616
,28433058..28433299,28434128..28434518

Expression

GEO Profiles:Os03g0691800

Genome Context

<gbrowseImage1> name=NC_008396:28429446..28434870 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28429446..28434870 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacagcaagagcctgctcctctgctggtgctcgctcctcctcctcctcctcgccgccgcagcgccgcccgccctcgccctcccgctctgcaccgactccagggcgccggtgccgctgaacgggacgacgctgggcttctgcggcggcggggggagcgggagcagcagctgctgcggcgccgcggatgatgccgcgctgaggaagcggttcgaggcgatgaacgtctccgacgccgcgtgcgccggggtcgtcaagtccgtcctctgcgcgaaatgtaatccatattcggctgagttgttcaactcaagctcaaagattcggatggttcccgtcctgtgcaatggatcagcttcagctagttctactcaatcgaaggattctacacaagactactgcaaactagtttgggaaacatgcaagaatgtgacaatactgaattctccttttcaatctcctttgcaaggtggtgcaacattacctagttcatcatcaaaacttactgatgtttggcagtcagaaaatgacttttgtacatcatttggtggctcatctgacaaccagtcagtatgcttaaatggaaatgaagtttcatttagcacttcagaaccatcacccagtcctaaaggggtgtgtattgagagaattggaaacgggacatacttgaacatggctcctcatccggatggatccaacagagttttcttgtctagccaagcaggtaaaatatggttggcaactgtcccagaacaaggctctggaggcattctgcaatttgatgaagccagcccatttattgatctaactgatgaagtccactttgattctgagtttggactcatgggtatagcatttcacccaaagtttgctaccaatgggcgcttctttgtttcttataattgtgacagaactcagtcatctaactgtgctggtaggtgttcatgtaattctgatgttaactgtgatccttcaaagcttggatctgataatggtgcccagccatgccagtaccaagttgttgttgcagagtactctgcgaaagtctcatcatcaaatgtttcggaggcaacatctgctaatccatccgaggttagaaggatatttacaatgggactgccatatacagcccaccatgggggacagatactttttggacctacagatggatatctgtaccttatgatgggtgatggtggaaacaaaggcgacccttttaatttttctcaaaataagagatcacttttggggaaaattatgaggcttgatgttgatggcgttcaaagccagagtcaaatcattaaccagagcttgtggggtaattattctgttcctaaagacaacccattcagtgacgaccgagacttacaaccagagatttgggccttgggcttgaggaacccatggagatgtaattttgattctgagaggccttcctatttctactgtgcagatgttgggcaggatttatatgaagaggtagatttgatctcgaagggtggaaactatggatggcgtgcatatgagggcccatacatttatcatccagaatggactcctggagggaatacatcgcttaattctataaatgccatcttccctgttatgggctacagccattctgctatcaacaagaacactgggtctgcatcaattacaggtggatttgtttatcgagggtcttctgatccctgcctatatggaaggtacatatatgctgatctttacgcgtcagcaatgtggaccggcacagagaccccagagagcagcggaaactacacctcaactctgattccgttcagctgctccaagaactctccaataccctgcgaatctgcatcaggcagcaaccaaccatcgttgggctacattttctccttcggcgaggacaacaacaaggatgtcttccttctaacatacaaaggcgtctaccgagttgtccggcctagcctctgcggctacacctgtgccgcggagaaaccagagaccaacaacaatggaacgtctccctcaggctcttcatcatttgcttcaggaaggaggatagggaagttggcagtagtaatggcgtttgttttgtgtgcattattcttctga</cdnaseq>

Protein Sequence

<aaseq>MANSKSLLLCWCSLLLLLLAAAAPPALALPLCTDSRAPVPLNGT TLGFCGGGGSGSSSCCGAADDAALRKRFEAMNVSDAACAGVVKSVLCAKCNPYSAELF NSSSKIRMVPVLCNGSASASSTQSKDSTQDYCKLVWETCKNVTILNSPFQSPLQGGAT LPSSSSKLTDVWQSENDFCTSFGGSSDNQSVCLNGNEVSFSTSEPSPSPKGVCIERIG NGTYLNMAPHPDGSNRVFLSSQAGKIWLATVPEQGSGGILQFDEASPFIDLTDEVHFD SEFGLMGIAFHPKFATNGRFFVSYNCDRTQSSNCAGRCSCNSDVNCDPSKLGSDNGAQ PCQYQVVVAEYSAKVSSSNVSEATSANPSEVRRIFTMGLPYTAHHGGQILFGPTDGYL YLMMGDGGNKGDPFNFSQNKRSLLGKIMRLDVDGVQSQSQIINQSLWGNYSVPKDNPF SDDRDLQPEIWALGLRNPWRCNFDSERPSYFYCADVGQDLYEEVDLISKGGNYGWRAY EGPYIYHPEWTPGGNTSLNSINAIFPVMGYSHSAINKNTGSASITGGFVYRGSSDPCL YGRYIYADLYASAMWTGTETPESSGNYTSTLIPFSCSKNSPIPCESASGSNQPSLGYI FSFGEDNNKDVFLLTYKGVYRVVRPSLCGYTCAAEKPETNNNGTSPSGSSSFASGRRI GKLAVVMAFVLCALFF</aaseq>

Gene Sequence

<dnaseqindica>23..128#221..390#1231..2022#2203..2419#2993..3171#3613..3854#4683..5073#agacccctccacggcgacggccatggcgaacagcaagagcctgctcctctgctggtgctcgctcctcctcctcctcctcgccgccgcagcgccgcccgccctcgccctcccgctctgcaccgactccagtgagtagtgtgattccggcgtgccgttcctctgttctggactcctttttgttttttgttgttgagttttgtgtgtggttgatcgggtgcaggggcgccggtgccgctgaacgggacgacgctgggcttctgcggcggcggggggagcgggagcagcagctgctgcggcgccgcggatgatgccgcgctgaggaagcggttcgaggcgatgaacgtctccgacgccgcgtgcgccggggtcgtcaagtccgtcctctgcgcggtacgcacggatcgttactacctctgcttatcaatttatcatgagtttccgtggccgtctcgtcttcaggggaaaaaaaatctgaagaccaaaaaaaaaaaagtactagtgttggttcagcagtttctgctgtttgggttgcataccaagtgttcgatgttttgcctgatcaggctgatattccggggggaggttctaagctgagcacttttttttttcattctcggggatgatgatagtgttgatcagtcgtattagcattccaaatgttggtagccgaaatctctaaaccaaactcatgaaccaccctcacagcgaacaacttaactgaatccttgggcattattcttcccatgttgtgatgactgctgagtccacgcgctgcacacctctgcccaacactatcactcgttgacttcatagagggatgggcagcaatccaagtaccatttattcttgaatcagatattggataggtgtgttgtgattcaagactcttaacataccaggatatagccgtactcttattactataagaatctaaaaaggaaaagcaatagaattttcatgtaaaccgcctttggttctaataaaaagttcgtctaaatcattaaaaaggaggtgtgactgggtcatgcatggggtaaagccattgggttttactgtgtataatgataataacaacaacactgcctgactgccatgtgatgatcagtacttgcagtaggacatggatttcaagagatattctgctgtttattttttctgtgagctgatagttactacttatttgttgctcgtagacatcaatgctaaaatattttctaatcttgtatccagaaatgtaatccatattcggctgagttgttcaactcaagctcaaagattcggatggttcccgtcctgtgcaatggatcagcttcagctagttctactcaatcgaaggattctacacaagactactgcaaactagtttgggaaacatgcaagaatgtgacaatactgaattctccttttcaatctcctttgcaaggtggtgcaacattacctagttcatcatcaaaacttactgatgtttggcagtcagaaaatgacttttgtacatcatttggtggctcatctgacaaccagtcagtatgcttaaatggaaatgaagtttcatttagcacttcagaaccatcacccagtcctaaaggggtgtgtattgagagaattggaaacgggacatacttgaacatggctcctcatccggatggatccaacagagttttcttgtctagccaagcaggtaaaatatggttggcaactgtcccagaacaaggctctggaggcattctgcaatttgatgaagccagcccatttattgatctaactgatgaagtccactttgattctgagtttggactcatgggtatagcatttcacccaaagtttgctaccaatgggcgcttctttgtttcttataattgtgacagaactcagtcatctaactgtgctggtaggtgttcatgtaattctgatgttaactgtgatccttcaaagcttggatctgataatggtgcccagccatgccagtaccaagttgttgttgcagagtactctgcgaaagtctcatcatcaaatgtttcggaggtatgcattttgatacactcttctgtgcaaatattgacatcaatgctctttgcttatccttattcttcttccgtgtgttctcttattttcgaagacacaatgcagcatgtatataaaatgaaagaagatatcacagagttgacatttcagtagcattctcatcatatatttattttctaggcaacatctgctaatccatccgaggttagaaggatatttacaatgggactgccatatacagcccaccatgggggacagatactttttggacctacagatggatatctgtaccttatgatgggtgatggtggaaacaaaggcgacccttttaatttttctcaaaataagagatcacttttggggaaaattatgaggcttgatgttgatggcgttcaaagtaagttagtaatatggattttgttttcatggttgttcgtaatgtcatttcattgactattccattattataatttgttaaattgatgccatgtgtaactgtttcatctccatgttcctgttgtatagaaagattattctgttggaaattttataattgctttattcaaatgcccactatgtataatttaatattctttccttcctgaataccagggtactagtaactatactaaatgaagcagcctacactaagaaaatgatagcattaaaaatttgcaccgtttggtgtttacataattatttaatgtgcacatgtttctggatggttgagattataaaaaaatatagctgacaatggtaaattgtaattttgtgtctgcggtcctagtttgatatcagaataacattacgtgactgtttacatttgtcagccaaagctattttatcaggtgaacacactgtcctttcggaactttctggatgaaaatagtcatgccattactgcatcttcatgatatggtatttactttttattagattattgctccttcacagtattgttgcttttcaggccagagtcaaatcattaaccagagcttgtggggtaattattctgttcctaaagacaacccattcagtgacgaccgagacttacaaccagagatttgggccttgggcttgaggaacccatggagatgtaattttgattctgagaggccttcctatttctactgtgcagatgttgggcaggtaatgtttctgaaaatattggcaagtgggcaaccacttcatattgtcatgtgcatgttacacaactcatttaagtctcttctttgcaactgagctcttttaatatgggctactgaactagatttggacatgatcatgcattctcttgctaaaatttccatttttatgtaagggtttgtagttactatgcacatgtttaagcctttttaaaaccccatacgggtccatattttgtgaagattcacatatggaaaatcgtgtaagaatcttgccttgttttcatcatctatggtattcttttgcagtatgtactgttctttttgctcattatgtttgaaggctgagaattatttcgggtacaatataatatggactgtcaggatgcattttgatctgaccatttgcttttattggcatttttaccttgacatacatccataggatttatatgaagaggtagatttgatctcgaagggtggaaactatggatggcgtgcatatgagggcccatacatttatcatccagaatggactcctggagggaatacatcgcttaattctataaatgccatcttccctgttatgggctacagccattctgctatcaacaagaacactgggtctgcatcaattacaggtggatttgtttatcgagggtcttctgatccctgcctatatggaaggtttgtatctgctattagttggtttcttaacatttcataattttggagcaaatgacgtaaaaaatgactccatgcagcatgagtaaagttttccatgtatctagtttcattaggtaacgtgtacgctggaattcatcatttagaaccagttacactacctattcacaaccaatcatggcacatgctatatttctatcatgtcaagccaacagtgcaacttcacttttttttagaacttatggtgcgcaaaatagtttgtgcattaattgtaaaacaaatgcatatatacagtatatttctaatgaaaaaataaaaatatggattgagcatgtagaaaagcactttgttgggctttgcaagacagaagcatataacatgttaagtgcagaacttttcactctgatgcttattcatcaatccctatttttgtaggtagtcaccctagtactagtttttgtgtataccatttgcagttacaatagcaccctaaccatacattttcatctttgcacaccgacatatattcaccaatccttccattgaagaacatgactttaatagcaacttgaggattgatgaatatcaatatcattcacatttacaagctgcatagtaattaaccaaacgactatttgttcttctagtaatgagccgtgatagtaacatatcatctattctgatatatattaatcaatcctcatagtaatatgcatattgccagtattgttcttctagtactattatttgtgtttaccatttacaattacaagttgcgcagcaaaattagctatagaaattacaatttctatccccttgatatgtgttcaggtacatatatgctgatctttacgcgtcagcaatgtggaccggcacagagaccccagagagcagcggaaactacacctcaactctgattccgttcagctgctccaagaactctccaataccctgcgaatctgcatcaggcagcaaccaaccatcgttgggctacattttctccttcggcgaggacaacaacaaggatgtcttccttctaacatacaaaggcgtctaccgagttgtccggcctagcctctgcggctacacctgtgccgcggagaaaccagagaccaacaacaatggaacgtctccctcaggctcttcatcatttgcttcaggaaggaggatagggaagttggcagtagtaatggcgtttgttttgtgtgcattattcttctgagatgtccatccctgttagcttgttatatatcatgtatggtttctttcgcacctgctgtacagcattgacgagccctacacgtctgtgtgactgtttgtgattattagtagtatttggttgtgcttagttctcaagtggtgggcttgtgcaatgtagcattgtgatgactgaaaattaattagccgtgcttgcctttaggattgggcaatgggcaagaatatttggcaagtggaaccacgttactgttataaatgaaagttgtacggggggtaagctttgttctgaacctttagttttcgggcttgtttggtttggtgctaaattatgcccaactaattcattggtaattttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0691800, RefSeq:Os03g0691800