Os03g0694500

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0694500| Description = Similar to Permease 1| Version = NM_001057504.1 GI:115454736 GeneID:4333795| Length = 3562 bp| Definition = Oryza s...")
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Gene Name

Os03g0694500

Description

Similar to Permease 1

Version

NM_001057504.1 GI:115454736 GeneID:4333795

Length

3562 bp

Definition

Oryza sativa Japonica Group Os03g0694500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28572621..28576182

Sequence Coding Region

28572703..28572796,28572892..28572989,28573071..28573247,28573335..28573435,28573545..28573620
,28573721..28573780,28573878..28574062,28574177..28574273,28574695..28574781
,28574871..28574929,28575014..28575105,28575212..28575289,28575433..28575593
,28575709..28575927

Expression

GEO Profiles:Os03g0694500

Genome Context

<gbrowseImage1> name=NC_008396:28572621..28576182 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28572621..28576182 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccctgtgaaggctgaggagctggtggcgttcgtccccaaggagcagtacgacggcgtcgactactgcatcaccagcccgccgccatggctgacggcggtgctgttggcgttccagcactacctcgtcatgctcggcaccaccgtcatcgtcgccaccatcctcgtgcccctcatgggcggcggccatgtggagaaggcgatcgtggtgcagaccatcctgttcctcgccgggatcaacacgctgctgcaggtgcacctcgggacgcggctccccgccgtcatgggcgcctcctacgcctacatctacccggccgtcgccatcatcctaagccctcgcttcgccatcgtcgtcgaccccttcgagaggttcgtgtacacgatgaggtcgctgcagggcgcgctgatcatcgccggcgtcgtccaggccatcatcgggttcttcggaatctggaggatcttcataaggttcctgagcccactcgcggcggttccgttcgtgacgctgtccgcgctcggcctcttctacttcgccttccccggagtcgccaagtgcatcgaggtcggcctcccggcgctcatcctgctcctgctcttcaccgagtacgcggcgcatttcttcgcgagggggagcttcctgttcgggcggtgcgccgtgctggcgacggtgctcgtcgtgtggatctacgccgagatcctcacggcggccggcgcctacaacgagaggtccctcgtgacgcagttcagctgccgcgccgaccgatcggggctcatccatggcgcaccctgggtcaggttcccttacccgttccagtgggggtaccccatcttcttcgccgacgattgcttcgtcatgatcgctgcctctttcgtctcactgatcgagtctacgggcacgttgatggcggtgacgagatatgcaggggcaacgttctgcccgccttcagttttcgctcgtggagttggctggcagggcatatctaccattctggacgggatgtgtggtacattgacaggatcagtagcttcagttgagaatgcaggtctgttggccttgacgcgagtcggaagcagaagggttataaagatctcagccttgttcatgatcttcttctcgctgttcgggaaatttggggcaatcattgcatcaatcccattgccaatcttctctgcactgtactgcgttctcttcgcttattcagctgctgcagggctctgcttcctccagtactgcaacctcaacacactgagaaccaagttcatcctcagcatctccctgttcttgggcctgtccatcccacagtacttcagggagtacgaggtgttctacgtcttcgggccagttcacacccactcacccgctttcaatgtcatcgtcaacgtgatcttctcctcgcctgcgacggtggccgccatcctcgcctacctcctggactgcacgcacacctactgggacggcccggtgtggaaggacaggggcttccattggtgggagaagttcaagtcttacaggcatgacccgaggagcgaggagttctactctctgccgtatggcctcagcaagtacttcccttcgttctag</cdnaseq>

Protein Sequence

<aaseq>MAPVKAEELVAFVPKEQYDGVDYCITSPPPWLTAVLLAFQHYLV MLGTTVIVATILVPLMGGGHVEKAIVVQTILFLAGINTLLQVHLGTRLPAVMGASYAY IYPAVAIILSPRFAIVVDPFERFVYTMRSLQGALIIAGVVQAIIGFFGIWRIFIRFLS PLAAVPFVTLSALGLFYFAFPGVAKCIEVGLPALILLLLFTEYAAHFFARGSFLFGRC AVLATVLVVWIYAEILTAAGAYNERSLVTQFSCRADRSGLIHGAPWVRFPYPFQWGYP IFFADDCFVMIAASFVSLIESTGTLMAVTRYAGATFCPPSVFARGVGWQGISTILDGM CGTLTGSVASVENAGLLALTRVGSRRVIKISALFMIFFSLFGKFGAIIASIPLPIFSA LYCVLFAYSAAAGLCFLQYCNLNTLRTKFILSISLFLGLSIPQYFREYEVFYVFGPVH THSPAFNVIVNVIFSSPATVAAILAYLLDCTHTYWDGPVWKDRGFHWWEKFKSYRHDP RSEEFYSLPYGLSKYFPSF</aaseq>

Gene Sequence

<dnaseqindica>83..176#272..369#451..627#715..815#925..1000#1101..1160#1258..1442#1557..1653#2075..2161#2251..2309#2394..2485#2592..2669#2813..2973#3089..3307#ctcctcccctttcctctcttcctcatccgctctctctctctctcgtcgtcgaccgccgccgtctgtcgccggagtgggggccatggcccctgtgaaggctgaggagctggtggcgttcgtccccaaggagcagtacgacggcgtcgactactgcatcaccagcccgccgccatggcgtgcgtgctctgctctcctctccttgttaccgagcttagcttcgctagccgtcgatggagtactgatcggagtctctctcttcctgtgtgtgcagtgacggcggtgctgttggcgttccagcactacctcgtcatgctcggcaccaccgtcatcgtcgccaccatcctcgtgcccctcatgggcggcggccatgtgagccactcctccttaccttcctctttctctcccccatttttagtggtgacgagagatttgattgggcgcggtgtgcaggtggagaaggcgatcgtggtgcagaccatcctgttcctcgccgggatcaacacgctgctgcaggtgcacctcgggacgcggctccccgccgtcatgggcgcctcctacgcctacatctacccggccgtcgccatcatcctaagccctcgcttcgccatcgtcgtcgaccccttcgaggtatgtatcacaagctctttcctccatttttttcttgcctgaccactactcttcttctctgctcaatccaatgtcacacatccacagaggttcgtgtacacgatgaggtcgctgcagggcgcgctgatcatcgccggcgtcgtccaggccatcatcgggttcttcggaatctggaggatcttcataaggtgatgtttgctctgctcgtttctcgcctgatctgttcttgatggattttttttcctgctccggcgaagcatttcgctgatgacgccgagacgatccgatcatgggcaggttcctgagcccactcgcggcggttccgttcgtgacgctgtccgcgctcggcctcttctacttcgccttccccggagtgagtgttcttggccaccaaattaacctcatcgtcttcttgattagcatctcccatggctggtttagaatgttggaacactgaaacacgaacgtcgcaggtcgccaagtgcatcgaggtcggcctcccggcgctcatcctgctcctgctcttcaccgaggtgaccaaaaacaccatggaaaaattctcacatcagctttatagcaagtagtgaaagaaatgttgtgaatttggtctgctttgttgtttgtttgcagtacgcggcgcatttcttcgcgagggggagcttcctgttcgggcggtgcgccgtgctggcgacggtgctcgtcgtgtggatctacgccgagatcctcacggcggccggcgcctacaacgagaggtccctcgtgacgcagttcagctgccgcgccgaccgatcggggctcatccatggcgcaccctggtaaaaaaaaaataaattccgccgacgtacggattcagagtttctctgctcgattttttaccacactgacagcattgcatcgatcgtgttcgttcttcttcttcgacgaggcagggtcaggttcccttacccgttccagtgggggtaccccatcttcttcgccgacgattgcttcgtcatgatcgctgcctctttcgtctcactgatcgaggtaggcatgcatcatcctgttcatcatcactcaatttcatgttttgtactccgaccgtattttaatagatggcgtcgttgactttttaaccaacatttgattattcgtcttatttaaaaatcaatgtaattattatttattttattgttacttgatttatcatcaaatgttctttaagcataacataaatatttttatatttatataaaaattttgaataagacgaatgattaaatgttgataaaaaagttaacggcgtcattaagatagtgagtaatcagtaaattttcattaccagatagatgtctacattagttgagttcctaatcattgatttgtcacaaacatgtcttcaaaacactggggatttggtgagaagtttctacttgtaagtctgacgaggaattctggtcgatttcagtctacgggcacgttgatggcggtgacgagatatgcaggggcaacgttctgcccgccttcagttttcgctcgtggagttggctggcaggtactgaaaataacagaaactttcagtaattctcactgagtttttctgcagaacgaacgctcactgcactgcaacctgggcaatttcagggcatatctaccattctggacgggatgtgtggtacattgacaggatcagtagcttcagtgtaaagcactcagctctcttagaaccttacctagacttccacttagaaggatggaaataacttgtccttgtattgcttgagaagtgagaatgcaggtctgttggccttgacgcgagtcggaagcagaagggttataaagatctcagccttgttcatgatcttcttctcgctgttcggtatgatttcccatcattcagaatctatcagcagtgttcaccattgcattgttagcaactccacattatctgattctgatacaatgagatgccggaaaatcaacagggaaatttggggcaatcattgcatcaatcccattgccaatcttctctgcactgtactgcgttctcttcgcttattcaggtgagccttcatgataccatcactaataaattcaagagatcattcatggccgaatgcatgatctatgatgtagaggctggaatgaattcattatggaaaattaatattccggaagacttacacttggtttctgcatgagacagctgctgcagggctctgcttcctccagtactgcaacctcaacacactgagaaccaagttcatcctcagcatctccctgttcttgggcctgtccatcccacagtacttcagggagtacgaggtgttctacgtcttcgggccagttcacacccactcacccgctgtacgtgaaccaacccagctctgaatctctgttctctgattgcatcaagatcatggccgttttacttttctgaatgtttctgaattctgatgatacaacatctttccttttgcagttcaatgtcatcgtcaacgtgatcttctcctcgcctgcgacggtggccgccatcctcgcctacctcctggactgcacgcacacctactgggacggcccggtgtggaaggacaggggcttccattggtgggagaagttcaagtcttacaggcatgacccgaggagcgaggagttctactctctgccgtatggcctcagcaagtacttcccttcgttctaggccaaaggatggcgagaggtagaagacgatgcaatcatctggagcctttagcttcactgctgtggctgttgcatgcaaagcattttggatatgagatgttgtggatctaatgaaatgaaacttagaattttggatggtattacctctgtcaacttggggggggggattcaggggcctggatgatcctgccattgattttgatttggtttttgatctctgatccaatttgaacagcagaagaatagtaaacctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0694500, RefSeq:Os03g0694500