Os03g0698350

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0698350| Description = ABC-1 domain containing protein| Version = NM_001186670.1 GI:297722470 GeneID:9272392| Length = 5760 bp| Definition...")
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Gene Name

Os03g0698350

Description

ABC-1 domain containing protein

Version

NM_001186670.1 GI:297722470 GeneID:9272392

Length

5760 bp

Definition

Oryza sativa Japonica Group Os03g0698350, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28749576..28755335

Sequence Coding Region

28749576..28749587,28751486..28751665,28751751..28751842,28752263..28752374,28752456..28752674
,28753022..28753058,28754185..28754285,28754429..28754524,28754778..28754903
,28755021..28755335

Expression

GEO Profiles:Os03g0698350

Genome Context

<gbrowseImage1> name=NC_008396:28749576..28755335 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28749576..28755335 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcggcgggcggcgacggcggcgctggccctgggcgcgggcgccggcggggccgccatcgcctactccgacgacccctccgccaccctcaagatctgcgcgcacctgcccccgcgcctcctccgcgacgccgccaccgccgccaccatcgccttcgactaccagtactccctctggggcctcgacccgggcaccccggcctgggtcagcgccaagcacgacgcccacctccgctccgcaaaccgcctccaggagctctgcttccgcaacggcggcatctacatcaagctcggccagcacatcgcccagctggagtatgttgtgccggaggagtacgtgcagacgatgagggcgtcgatgctgaagagatgcccggtgtcatcatacgagcaagtttgccgagtgtttgggaaagatatgggagaatcaccggaaactgtttttgtagaattcgatcctgttccacttgcaagtgcttctctcgctcaagttcatgcggcaagaacacatgatgggcaaaaagttgcagtgaaggttcaacatgatcacttgacagatacttctgttatagatattgccaccgtgggtttgatagtgaacactcttcattatattttcccttcgtttgactacaggtggttagtcgatgaaatccgtgaaagtgcacctaaggaattagatttcttgaatgaagctaaaaacagtgaaaaatgcgtgcaaaactttagaagattgtctccgcacattgcagggagtatttatgtccccaaggtctattggactctaagctcatctagaattctcacaatggagtttatggatgccaaggaggtaactgatgttaaaggaattaaagaacttgggattcgcccagtcgatgtttcaaatctagtcagtaaagcattttctgagatgattttcaagcatggttttgttcattgcgaccctcatgctgcaaacatgatgatccgacccttgccacaagatagcaaaaaaacttttggatggagaaggccacaattgattcttcttgatcatggtctttacaaagaacttgattatgccactaggataagctatgcttctctttggaaggcacttgtttttgctgatgaaaaatcaattaaagagaacagtgtcaaactaggtgctggggaggatcttcatgcactttttgctggtgttctcacaatgaggccatggaaaagtgtgattgacccggctgtcgatcatcttgttctagatggcagtagtaatgatcgttctgaacttcagaacatatcatag</cdnaseq>

Protein Sequence

<aaseq>MWRRAATAALALGAGAGGAAIAYSDDPSATLKICAHLPPRLLRD AATAATIAFDYQYSLWGLDPGTPAWVSAKHDAHLRSANRLQELCFRNGGIYIKLGQHI AQLEYVVPEEYVQTMRASMLKRCPVSSYEQVCRVFGKDMGESPETVFVEFDPVPLASA SLAQVHAARTHDGQKVAVKVQHDHLTDTSVIDIATVGLIVNTLHYIFPSFDYRWLVDE IRESAPKELDFLNEAKNSEKCVQNFRRLSPHIAGSIYVPKVYWTLSSSRILTMEFMDA KEVTDVKGIKELGIRPVDVSNLVSKAFSEMIFKHGFVHCDPHAANMMIRPLPQDSKKT FGWRRPQLILLDHGLYKELDYATRISYASLWKALVFADEKSIKENSVKLGAGEDLHAL FAGVLTMRPWKSVIDPAVDHLVLDGSSNDRSELQNIS</aaseq>

Gene Sequence

<dnaseqindica>5749..5760#3671..3850#3494..3585#2962..3073#2662..2880#2278..2314#1051..1151#812..907#433..558#1..315#atgtggcggcgggcggcgacggcggcgctggccctgggcgcgggcgccggcggggccgccatcgcctactccgacgacccctccgccaccctcaagatctgcgcgcacctgcccccgcgcctcctccgcgacgccgccaccgccgccaccatcgccttcgactaccagtactccctctggggcctcgacccgggcaccccggcctgggtcagcgccaagcacgacgcccacctccgctccgcaaaccgcctccaggagctctgcttccgcaacggcggcatctacatcaagctcggccagcacatcgcccagctggttcgtgctacgggaaatcgggctcctccctttgattcgtgtgacgtctttgctgaaattttggttgctgcgtggagttgaggtcgagctggttgtttgtttgtttgtttgttccaggagtatgttgtgccggaggagtacgtgcagacgatgagggcgtcgatgctgaagagatgcccggtgtcatcatacgagcaagtttgccgagtgtttgggaaagatatgggagaatcaccggaaactgttagttccttgccatcctcctccttgcattactgtctgaataccacttctatacctttgctgtgggaatgtaggctgctgctcaagcgcataacgatcgttgaattcacaattcacatgacaacttggtccaattctggcacagactattgatgcttaaacagattagtgggtttatgggctggattatgcacgggcttgtcaatttggaagcaaatctgacgattttttttctctttgtcctgatgtgtaggtttttgtagaattcgatcctgttccacttgcaagtgcttctctcgctcaagttcatgcggcaagaacacatgatgggcaaaaagttgcagtgaaggttgcaatctagagaaacactgttatttgtctcgagtacactctcatattttatttgggactcttacattagcactatagagtttgaattttgtccagcatgctgtcttcctttaacatgttccattcctatcttaatctcaggttcaacatgatcacttgacagatacttctgttatagatattgccaccgtgggtttgatagtgaacactcttcattatattttcccttcgtttgactacaggtacccctcctaatttggttgtattgtttcctttttattgacatgcatgctacctcaaaaacttatggttagatccagtttagctcctctttatgggaactatatgattatgcattggtaggaaactgctagccaacaaagtcccacatctttatgggtttactgttgcaaattttgtttctgcaatccttgtctgttcatgataattcctggctcactgcttttttttggtgatttattgggaagcggcatgcctatgcaaaaatcatcaatgggttggtcaaacacaataaaaggatattatcatcttggatagttacacaagatgtttggcatagttggtgtatcagctcaagattaaggattagaattatcgattttgatctttcaactcccttgttatttagttagggcgcttaggaaggatgagtttgatgctatccatacaattccaaaatttaaaagttgctataagcaatgcaaatatagtttcttaatgataaacatgtctacattctacagtatgtgagttgaataatatatttttattactgtctagtaagttaaaaatagtgccccattacattggaattatggttcttactttgattggatcgttttttttttccttgggaagcttatgttacaacaaaaatcatagactggcatcaaaataaatgaaatattttctcttggcaatgttggatcaacggtttttcaaatatgaaaccaacaaaaggactgtgattactttgaatcaagtcaacagcagttccttggcatgcaaagagccccataactactttagggatttgcattgaaagatgcagtcccttccacttcttcagagatttttttttatggtgctgtataactgcaaatggtcatgacacatgttatgatgatttccatttagtgtaaatgaggcaaatacacacaatcctttgcattgttggacagttgaattgagctcctcacaagtggcacgtttgtgtaattatgcatttgcagtacacaattatgttgatgtgaccatagttctttcattgaaaattagtgaatctacttttccacggaaatcctgttttgcatcaaagtttatgccattaaaattggttccttgcaggtggttagtcgatgaaatccgtgaaagtgcacctaaggtacctttctaatatttcttggcaatttaacattactgctgttaacttttcttttcaatatgttctgctaccatttctttttgttaattagtaaatgcatctctggcctttacgagttgtcatcttataactttatagtccattttatggtcatggactcatggcctgttgtcagtaggatctctcgtgtttatcctgaattttatgctcagcagcatattttccagttgggtgtcttcatgttgatcttgacttttatttttttctatacaattataatatactcaagtgtaaaggaacatatttacacaatttggattggtactgatttcctctcttggtttcaggaattagatttcttgaatgaagctaaaaacagtgaaaaatgcgtgcaaaactttagaagattgtctccgcacattgcagggagtatttatgtccccaaggtctattggactctaagctcatctagaattctcacaatggagtttatggatgccaaggaggtaactgatgttaaaggaattaaagaacttgggattcgcccagtcgatgtttcaaatctagtaagtaccacagtacagtttcttgaaaaaaaataaagtgctaataacttctttacagactctcacttgacagttgtgtaggtcagtaaagcattttctgagatgattttcaagcatggttttgttcattgcgaccctcatgctgcaaacatgatgatccgacccttgccacaagatagcaaaaaaacttttggtgagaatcttgccatctagcatcagaaaagtttttatcttcgctgaagtgtatctgggactgagatctcttgtccagtaataatgcttctatgataatcttaataatgcatactggcagtattttgtcatgttattgcctcattggatgagcagatgagtttttaaatgcatggtggggtagctttttttttcttgaacacgcatggtggggtagcttcaccatgtgatgatcttcattgcagtaatatatatgttaagtgagatgtggcatgtgtatttttttgtgagaaaatgagaatatgattgttttcttaagatcctaggtggaaacaatgcatattgcagcttatatttgttggataggtcagttattgcatttgtttattacgcttatatgattttttttacttgaacgtaggatggagaaggccacaattgattcttcttgatcatggtctttacaaagaacttgattatgccactaggataagctatgcttctctttggaaggtgacaaattgacaatgttatcgcagttttttctatgatcacaactgagtagtcattactaactttatgaaatttgttgatgcaggcacttgtttttgctgatgaaaaatcaattaaagagaacagtgtcaaactaggtgctggggaggatcttcatgcactttttgctggtgttctcacaatgaggccatggaaaagtgtgattgacccggctgtcgatcatcttgttctagatggcagtagtaatgatcgttctgaacttcaggtgatttatattatgcattattaatgttctccatgactccatgaacactgacagtatatgtaactgtgcaacttcagtaataaccaatagtaccagtaactctagggtaatccatgtatcacctcctacttgaaatggaattcaatcatttctcacttttttattttgttcattgttgctcaaagtaacactgctccaaatcttttgatctttccaatagtaggaaaaaaggccaccgaagtaatatggaattgctgattatcagcccagcttgctctaaagagatcggggaccaatttagctgttttttaatctgcaatctaaaacctatttaccatatatatgatggttttaagttttcatgttttcctagtatgtttggaaactttgttatctattgccatgcttgtataacattacatcttttttttttgttcattttcaattcccgtcctcattcttcttatgatatttttctccttgcaccttcaattcatgagatgattgaactgggacatgttagtcaaggttttctttttgggctagctgtggaaaatcatgtactttgaggtccttacgtgatatgtttttctttgtcacagatgtatgcttccttatattttccacaaatctcagagcttctaaggagactgccaagggtcatcttgttgatgcttaaaacaaatgattgtttacgttccgtcaatcatgccctggtaagtgaaaaggaatcatgaccataaatatgtaggctgtcacatagtaatatcttctttcttgcatttgtcacttcccttgatgcttttgataatcaagacgtaagttgtactgcaaaagaaaataattgatataacaaggaagcatgggatagctacggggttttatcatagttgttgcactggcttgaattgtttaatatcctatgcggttataagcaatgaaccccacgaagccattataaagtaggtattatttcttttaggcttcattccctctttatccgtgttcttctctgtagaaggtcaatgcagcatcgtataaggggcactctagcaagttgtacaaaaattcgagaattaattataggtccttttttggctctgtttacacgtatgatgctttgtcaggttggaggttcttcaatggaatcatttgtaatcattggacgaatctcttctgaggctgttttggaagctaaaaggatgagtagtagatcaattctgaataaactaatgatatggctagaggaaattttactggaagctcgattctttagtttgaagttgctgttgtgttttatgcagcttaagaagttattggcctgttaagcagcagatcagcataccaactattcttggactagtgtaaaatattagaagctgtcattttagtttttctttttgagagagaaaagtggcatttagttgaaaaattctttttctctttttggtatacaccattctttttggttaaccattttgctaccaggcttttcattttgattagccacttccaaacagaagatgatgccactatgacatcgtatgtttattctaatagatggatagaattgtagaaaatcccatcactgcacagtgtatatatataactctagttccatggatccagcaaatgttggcccgatgaatatgctgtgccaattgcgttatacaagatgtaagagtaaaattgctactggaaagagagtcactctgacatttgccagagcaaatttcgtttggtcaaatttgtgttcatcgtgatgtcgatctccattttctttaccccctacttttctgctagcattttatcgttgtgctgatgttctgcacttctggttcatccttttgagttgccgctcctactgtcacgttgacacgttctatactttgtcctagaacatatcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0698350, RefSeq:Os03g0698350