Os03g0700800

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0700800| Description = Similar to EIN2| Version = NM_001057531.1 GI:115454790 GeneID:4333824| Length = 7598 bp| Definition = Oryza sativa ...")
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Gene Name

Os03g0700800

Description

Similar to EIN2

Version

NM_001057531.1 GI:115454790 GeneID:4333824

Length

7598 bp

Definition

Oryza sativa Japonica Group Os03g0700800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28877050..28884647

Sequence Coding Region

28877982..28878233,28878490..28878576,28878747..28878860,28878946..28879155,28880122..28880301
,28880391..28883174,28884053..28884325

Expression

GEO Profiles:Os03g0700800

Genome Context

<gbrowseImage1> name=NC_008396:28877050..28884647 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28877050..28884647 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggtgtgcacggtatagaatctctggctactggagatggttggcatcatctttcccgtacccttggaccggtgctcctgatctcgatggggtatattgaccttgggaagtgggtggaaacgatagatgccgggtctcggtttggctatgatctcgtaatactggtgttgcttttcaacttgtcggccattctgtgccagtatctgtcgatgtgtatcggcatggtcactgggaaaaatcttgcggagatttgccgcgaggagtacagtccatcaatatgtgtcatccttggtattcaggcaggattgtccttgctaaccgcggaactaaccatgctttcaggcatatcagtcggattcaacctggtctttgaatatgatgatcctatcgcaggcttatattttgctagtgttgtggtcaatttgctaccttacactatgtcttatctgggcaaacggatggctgggacattgaatgcatgcgtagcaggctttgcacttctttgttttgtgcttggtttattagtcagtcaaccaaaaattccagttgatatgaatgcaatgttccccaagttgagtggtgaaagtgcttattccttgatggcgcttcttggcggaaatgtaatagcgcacaatttttatgttcattcatcagttgtacagggccaaagacaatctacaactctttcccttggtgctctgttccacgatcacctgttctcaatattgtttattttcactggggttttccttgtgaattatgtcctgatgggctcagcagcagttgaatccaataatactctggttacttttcaagattctgtagatttaatgaaccagatgttcatgaatccgatggcaccaattgtttttttagtgatccttatcttttcgagtcatgtcatctcattgacatctattattggcagccacgcaattttgaagaatttctttggtgtaaacttgcctcattctgctcatcatctgctactaaaggccgttgccatggttcctactatgtactatgcaaaggttgcaggttctgaagggatatatcagttactcattatctgcccagttatccaagctatgttccttccttcatctgttattcctgttttccgtgtttcctcatcaagagttataatgagcagatataaaatatctttgtacgttgaaatattggccatcctagcatttcttcttttgctgttcacaaatatcatttttgctgcggaaatcctgtttggtgatagtacctggacaaacaacttgaaagggaacactggaagccctgttgtacttccgcatgccattgtagttctaatttcttgtgcatcaattacttttacgctgttcctggctgtcactccactgaagtcagcaagtaatgaacctgaaactcaggagctatctgagcactctcagagagaagatccagatactacttatcaaagagaagcaagtaatgaacctgaaactcaggagctatctgagcactctcagagagaagatccagatactacttatcaaatagaagtaagtaatgaacgtgaaactcagcagctatctgagcactctcagatagaagatccagatactttttatcatagagaggagctttctctggttgaacagaaagaagatcatacgacttctactattaatgctattcccaggatttcatcagaaagttatcaaacatcagctttggagcataatgactttcctgacatcactgtggagtctggtcatggcactcagcagcttactgcttttgtgccaattattccggaggtctcatcgtctatcaaacataaggaaccaaaatcagtagttattgaccagacggaaccagtgccaaaggtttgtactgccacagtagtagaacataacactgctgagaacatcaaaatgaagagtacaacttcaaagcatgtccaagaagaagcaggagctagcatggactatgatactgaggcttcttataatgcggaagtcagcaagtcttctggaaacaaggcacctccaatttctgatgacccaacatctcttactttgagcaaggggagagactctgatgctggttatcgtggcagtaacctctcaagactgcctggtttgggtcgtgcagcaaggaggcaattagcagcgattcttgatgagttctggggacatctctttgattatcatggtaagctaacgcaagaagctaatgcaggaaggttcaactttctgctaggaccatacccgaaagcagttagaagtgataaccaagccatcgaagcttctaggagccccttgatgagagatgcaatacgaggatcagctaccatacagaaatcatgggactcacgtgctaaggaagtctctagtccaggctttaattttgtgcttcagatgggtcgcattggatcatcaaactggtctgagagcatgcgtttatctaatgctgacatcccaaggccaactagcaccttgtttgaacaaaatactcagttttattcaaattataatgtcccatcttaccctgacaatcagttctatcaacctgctaccattcatggctatcacctggcaacctctttgaaaagtatgaatgcaagtcacagcacgcactccagcatttcactagatccacggcgacttcctagatcatctgaatctgctggttctaactacgcagattctgcaaggtatgctcgtaaccaagatgtaattggttcacagggaaccgcttcgcaaaacacaacaatgagctgtttagatacaatgacagtggagagagctttttacaatcctgcctctgttaatgagattgaaggggttggttcatctgcttactcaaagaagtaccatagttcacctgacatatctgcactaattgctgcaagtaggaattatttgccaaatgaagtaaatttgggaggtgctgctggaagcagttcatacttcagtaatttggcatgtgaaagatcacaatatgtgaacttgggatccagttccacagctcaatttgcacttagcaagcactcacaacctaatttccatagagacacatcatctatgcagtcaagtgtgaacccaagtactgaatccatttgggcccagcagccgtttgaacaattactcggtgtatcaagagcagagttgaataagggcgagggtaacaccgaccagagatcaagtggtgtcaccaaacacgatttctctaacaaagaatatgaggtgaaacttcttcaatcactcagattttgcatcatgaagctcttgaaactggaaggatcaggatggctctttgagcaaaatggtggctgtgatgaaaaattaattgatcaagttgctgtagctgagagagtttcacaacataccactgaaaatcagttatctgctgatctccagctccatagttctgatgaagacttgcagccactgcaaaggaatgataacagggatgccaattgcatgagcctactgcccaagtgtggagatgattgtgtttggcaggcccccctgattgtcagttttggtgtttggtgcatccgccagattctgaacctgtgccttgtcgaaagtaggccagaactttggggcaagtatacatatgttcttaatcgtctccagggaatacttgatcctgcattttccaagcctcagaaacccatgaaaggatgcgtatgccttcaaaaagttgccaagcccatctctggtactttcaccactgctggtatgatcttggagatgattaaagacgtggaacaagccatttctagccgcaagggccgaagcggcacagcagcaggagacgttgcttttcccaaagggaaggagaacctagcttctgtccttaagcgatacaagcgtaggctctcgaacaagacatctgcaggacaatag</cdnaseq>

Protein Sequence

<aaseq>MEGVHGIESLATGDGWHHLSRTLGPVLLISMGYIDLGKWVETID AGSRFGYDLVILVLLFNLSAILCQYLSMCIGMVTGKNLAEICREEYSPSICVILGIQA GLSLLTAELTMLSGISVGFNLVFEYDDPIAGLYFASVVVNLLPYTMSYLGKRMAGTLN ACVAGFALLCFVLGLLVSQPKIPVDMNAMFPKLSGESAYSLMALLGGNVIAHNFYVHS SVVQGQRQSTTLSLGALFHDHLFSILFIFTGVFLVNYVLMGSAAVESNNTLVTFQDSV DLMNQMFMNPMAPIVFLVILIFSSHVISLTSIIGSHAILKNFFGVNLPHSAHHLLLKA VAMVPTMYYAKVAGSEGIYQLLIICPVIQAMFLPSSVIPVFRVSSSRVIMSRYKISLY VEILAILAFLLLLFTNIIFAAEILFGDSTWTNNLKGNTGSPVVLPHAIVVLISCASIT FTLFLAVTPLKSASNEPETQELSEHSQREDPDTTYQREASNEPETQELSEHSQREDPD TTYQIEVSNERETQQLSEHSQIEDPDTFYHREELSLVEQKEDHTTSTINAIPRISSES YQTSALEHNDFPDITVESGHGTQQLTAFVPIIPEVSSSIKHKEPKSVVIDQTEPVPKV CTATVVEHNTAENIKMKSTTSKHVQEEAGASMDYDTEASYNAEVSKSSGNKAPPISDD PTSLTLSKGRDSDAGYRGSNLSRLPGLGRAARRQLAAILDEFWGHLFDYHGKLTQEAN AGRFNFLLGPYPKAVRSDNQAIEASRSPLMRDAIRGSATIQKSWDSRAKEVSSPGFNF VLQMGRIGSSNWSESMRLSNADIPRPTSTLFEQNTQFYSNYNVPSYPDNQFYQPATIH GYHLATSLKSMNASHSTHSSISLDPRRLPRSSESAGSNYADSARYARNQDVIGSQGTA SQNTTMSCLDTMTVERAFYNPASVNEIEGVGSSAYSKKYHSSPDISALIAASRNYLPN EVNLGGAAGSSSYFSNLACERSQYVNLGSSSTAQFALSKHSQPNFHRDTSSMQSSVNP STESIWAQQPFEQLLGVSRAELNKGEGNTDQRSSGVTKHDFSNKEYEVKLLQSLRFCI MKLLKLEGSGWLFEQNGGCDEKLIDQVAVAERVSQHTTENQLSADLQLHSSDEDLQPL QRNDNRDANCMSLLPKCGDDCVWQAPLIVSFGVWCIRQILNLCLVESRPELWGKYTYV LNRLQGILDPAFSKPQKPMKGCVCLQKVAKPISGTFTTAGMILEMIKDVEQAISSRKG RSGTAAGDVAFPKGKENLASVLKRYKRRLSNKTSAGQ</aaseq>

Gene Sequence

<dnaseqindica>933..1184#1441..1527#1698..1811#1897..2106#3073..3252#3342..6125#7004..7276#acagttccactaaaaaaatccacttcacctagcagccgctctcacctccacgcgctctccgccaccggagcacgagcgcgactgccaccacctccaccggattcatctccgcctcttgccgcggcaaagcccccccagcttggattcctctgtttttttttcctttttgcgtacgaatctcttgtatatccctctcctgtatgttgcgagaaatcaatctagtccgaatggtgtgctcctgcgtgctggagtagtctaggtataccagttttgttctccaaagcatttgggattgggttgaatggaacatctatggtccacgctaggtccgcccctggctgtgatggatggagcttagagcaggggcaacctagatcaggggtgtctccctggggggttttcatggtgctgtggatgttcactagctttggagggtttgattagggcctcttgggtcataacaggagggttttaagggacctggatttggtaaagcatttttcaggcatgtgatgcttcttggggaggatttcatggtgttgtggatgttcaccagctttggagggtttgattagggctgcttgggtcacaacaggagggctttagggatctgaatttggtagtcatttcaggcatgtgatgcttcttggggaggatttcatggtgttgtggatggatgtcccccaggtttggatggttagacttcttcgatcaccacaagagctttgaagagacctgagtggataagcatttgatccttcttggaggtgtttcatggtgttctagatgttcaccagcttcggagggtttgattagactgcttgagttaacagtgttcaagggactgaatttgataagcatgtcgggcatttgatccagtggtgtggattcgtatccatcttttgttgttataagatttgctgccacaaaaaatggaaggtgtgcacggtatagaatctctggctactggagatggttggcatcatctttcccgtacccttggaccggtgctcctgatctcgatggggtatattgaccttgggaagtgggtggaaacgatagatgccgggtctcggtttggctatgatctcgtaatactggtgttgcttttcaacttgtcggccattctgtgccagtatctgtcgatgtgtatcggcatggtcactgggaaaaatcttgcggaggtaccactttgctgacatctgtcgtcacctactcacatttcttcagtttagctcaatgaatggctgtacctttttttcctaagtggaagtatttagtgttactcagatagcatcaaccacataaaaaatagtgggggagttcttcaatttttcctcctttttttttctttaggggggtggttgatatttcatattcgtcatctatcattttcttcgagagctgttaacttttgtaacaatattacatgaacggaagatttgccgcgaggagtacagtccatcaatatgtgtcatccttggtattcaggcaggattgtccttgctaaccgcggaactaaccatggtatgttcatacactttagacaagctttcctctctcttttttttttttgttaattctttgttctagagttaatttaccaatgttatgcatagttgacctataggagcattcactaccagagaattcaggtttttgccagctttcaaacttttaatacttggttatttcagctttcaggcatatcagtcggattcaacctggtctttgaatatgatgatcctatcgcaggcttatattttgctagtgttgtggtcaatttgctaccttacactatgtcttatctggtaagcttatgattgatctcagaatatctgcagttctgcaccactaagagcaactctaagacgttatgcctttactttattctagggcaaacggatggctgggacattgaatgcatgcgtagcaggctttgcacttctttgttttgtgcttggtttattagtcagtcaaccaaaaattccagttgatatgaatgcaatgttccccaagttgagtggtgaaagtgcttattccttgatggcgcttcttggcggaaatgtaatagcgcacaatttttatgttcattcatcagttgtacaggcaagctccatttccttatgctgatgcttaagtaaatgctgagatagtggcttttgttgaacttgtactccacccataagttatatatatgagtaaatacttctttaacttgtataactattctgatcagtccatgaattctgaggacagttcattacttgccaatttttggaaaaatggtagaacctattttgtccctcattttttaaaaaaatttcccacacttggcattatagtttaaggttgggctgttcaatccaggttttgaatggactgttcaaaaccgggcaatgtcaatcttgctggccatgaagctaatcacataactgagcctgctgatttctggtttgcacaggttgacttgaccccaggctgtagtttaaagtaaccggttttcctaagttgtgttttctaatacatgattggtattagttttgaaatctgcaaggaagctaattctggttcatgctaagccatgcaagcataatcctgcaactttgtggtgtgataatagaaactggtgtgtgggttggcaaaccagaatcatgcatcctatgctaagatgtgcaagcataatcctgcaactttgtagtacattctttccatattaagaaaagagtaagaaaaatatgcatagattgatccaaatgcttgatttgttcttttgctcatgaaaaatttcttgcaattttctctaagcaaatgatgatcactaaacctgcattttaaatttatatgccttttctacaatcaactaatagaaagtcaggggatccaatacagttttttgtttctgaagcttaaacttgtcataaaacgtgtaagtcggttctactgtacctttgacatttgtgctctccgtgccatgcagttttcgtaaacccacaccattttccttttttattttttaccttttgttctatctgctatgccatgtttttgttaattcagaaatcatttgtgcagggccaaagacaatctacaactctttcccttggtgctctgttccacgatcacctgttctcaatattgtttattttcactggggttttccttgtgaattatgtcctgatgggctcagcagcagttgaatccaataatactctggttacttttcaagattctgtagatttaatgaaccaggtttttgcctccagtttgcattctgcttgttttgagtatgaattctgcaccatagttccttcatgagttcctctgaatgccttctgcagatgttcatgaatccgatggcaccaattgtttttttagtgatccttatcttttcgagtcatgtcatctcattgacatctattattggcagccacgcaattttgaagaatttctttggtgtaaacttgcctcattctgctcatcatctgctactaaaggccgttgccatggttcctactatgtactatgcaaaggttgcaggttctgaagggatatatcagttactcattatctgcccagttatccaagctatgttccttccttcatctgttattcctgttttccgtgtttcctcatcaagagttataatgagcagatataaaatatctttgtacgttgaaatattggccatcctagcatttcttcttttgctgttcacaaatatcatttttgctgcggaaatcctgtttggtgatagtacctggacaaacaacttgaaagggaacactggaagccctgttgtacttccgcatgccattgtagttctaatttcttgtgcatcaattacttttacgctgttcctggctgtcactccactgaagtcagcaagtaatgaacctgaaactcaggagctatctgagcactctcagagagaagatccagatactacttatcaaagagaagcaagtaatgaacctgaaactcaggagctatctgagcactctcagagagaagatccagatactacttatcaaatagaagtaagtaatgaacgtgaaactcagcagctatctgagcactctcagatagaagatccagatactttttatcatagagaggagctttctctggttgaacagaaagaagatcatacgacttctactattaatgctattcccaggatttcatcagaaagttatcaaacatcagctttggagcataatgactttcctgacatcactgtggagtctggtcatggcactcagcagcttactgcttttgtgccaattattccggaggtctcatcgtctatcaaacataaggaaccaaaatcagtagttattgaccagacggaaccagtgccaaaggtttgtactgccacagtagtagaacataacactgctgagaacatcaaaatgaagagtacaacttcaaagcatgtccaagaagaagcaggagctagcatggactatgatactgaggcttcttataatgcggaagtcagcaagtcttctggaaacaaggcacctccaatttctgatgacccaacatctcttactttgagcaaggggagagactctgatgctggttatcgtggcagtaacctctcaagactgcctggtttgggtcgtgcagcaaggaggcaattagcagcgattcttgatgagttctggggacatctctttgattatcatggtaagctaacgcaagaagctaatgcaggaaggttcaactttctgctaggaccatacccgaaagcagttagaagtgataaccaagccatcgaagcttctaggagccccttgatgagagatgcaatacgaggatcagctaccatacagaaatcatgggactcacgtgctaaggaagtctctagtccaggctttaattttgtgcttcagatgggtcgcattggatcatcaaactggtctgagagcatgcgtttatctaatgctgacatcccaaggccaactagcaccttgtttgaacaaaatactcagttttattcaaattataatgtcccatcttaccctgacaatcagttctatcaacctgctaccattcatggctatcacctggcaacctctttgaaaagtatgaatgcaagtcacagcacgcactccagcatttcactagatccacggcgacttcctagatcatctgaatctgctggttctaactacgcagattctgcaaggtatgctcgtaaccaagatgtaattggttcacagggaaccgcttcgcaaaacacaacaatgagctgtttagatacaatgacagtggagagagctttttacaatcctgcctctgttaatgagattgaaggggttggttcatctgcttactcaaagaagtaccatagttcacctgacatatctgcactaattgctgcaagtaggaattatttgccaaatgaagtaaatttgggaggtgctgctggaagcagttcatacttcagtaatttggcatgtgaaagatcacaatatgtgaacttgggatccagttccacagctcaatttgcacttagcaagcactcacaacctaatttccatagagacacatcatctatgcagtcaagtgtgaacccaagtactgaatccatttgggcccagcagccgtttgaacaattactcggtgtatcaagagcagagttgaataagggcgagggtaacaccgaccagagatcaagtggtgtcaccaaacacgatttctctaacaaagaatatgaggtgaaacttcttcaatcactcagattttgcatcatgaagctcttgaaactggaaggatcaggatggctctttgagcaaaatggtggctgtgatgaaaaattaattgatcaagttgctgtagctgagagagtttcacaacataccactgaaaatcagttatctgctgatctccagctccatagttctgatgaagacttgcagccactgcaaaggaatgataacagggatgccaattgcatgagcctactgcccaagtgtggagatgattgtgtttggcaggcccccctgattgtcagttttggtgtttggtgcatccgccagattctgaacctgtgccttgtcgaaagtaggccagaactttggggcaagtatacatatgttcttaatcgtctccaggtatttttttttctattgctgtctattttgggcaaactgcaatatggagggtaacccagggatgcagatcatcaatggttgcttcctgcatgtagcatacatactatataggctattttggcattgttgtgaattatgcttcctacatatagcatacaaactagtactatataggctattttggtattgttgtggattacgataatctttattcgtatgatggctttaagatatttcggttttttattacctgtttttgcctaaatcaaattgacaaagatatatttcagtaaaaaagagagagagattgatttcccaataatagtagaagtggatggatatgggagaacggcaacagcttgataaccaaatttgacactctctctgatttttcaatggattgtgaaaatactccatatagcaatcctattttccataggaactttaaaaataagcactgtcagcacacataacaactgcaaactaaccatatacttgctatggtggctgggaatatttcgtgatgtatgaaagtatgaaacactgcaatagatggcattcatttatataaatttaaaatatagttgtttgcagagaactttgttttgtatgactactatcattttcttcgcctgtagatgaatcctgcaacttgtaagtgcattttgtcctactctgtgcttttaaccataagataaaccttaatcagaaatcccaactactgatttccttcagaagtgcataaaaacttgtgagtgggttcggttgcattgagaaattgacttctaatgcgacttgcatgcagcagaactgcccaaacttctgccacactgtttggacttcaagtttgctaattttctttttcatttacttgctagggaatacttgatcctgcattttccaagcctcagaaacccatgaaaggatgcgtatgccttcaaaaagttgccaagcccatctctggtactttcaccactgctggtatgatcttggagatgattaaagacgtggaacaagccatttctagccgcaagggccgaagcggcacagcagcaggagacgttgcttttcccaaagggaaggagaacctagcttctgtccttaagcgatacaagcgtaggctctcgaacaagacatctgcaggacaatagcgtggcagcgagctttcttttgtttcttgtttgtatagggttcttggggctgctccacaaagttctgtttttttgtgctcctcaaaccttgggttttttcgatgcacacgatctccagagtgcctgagagcttcttgatctttggtcatttttgcacatgttgtttatgaagtggccaagggtgaatggtataccttgtttattcatcttatcagcgagatctcaacagtagatgatatttgctggagcagcaacattgtaaagttctttttccagatgaacattctgaagtccgctggcttggctttctgaaatctccact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0700800, RefSeq:Os03g0700800