Os03g0703000

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0703000| Description = Similar to Beta-glucosidase| Version = NM_001057548.1 GI:115454824 GeneID:4333841| Length = 4877 bp| Definition = O...")
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Gene Name

Os03g0703000

Description

Similar to Beta-glucosidase

Version

NM_001057548.1 GI:115454824 GeneID:4333841

Length

4877 bp

Definition

Oryza sativa Japonica Group Os03g0703000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29000788..29005664

Sequence Coding Region

29001079..29001347,29001460..29001562,29001696..29001727,29001820..29002037,29002177..29002292
,29002546..29002789,29003161..29003248,29003368..29003439,29003545..29003620
,29004379..29004437,29005324..29005561

Expression

GEO Profiles:Os03g0703000

Genome Context

<gbrowseImage1> name=NC_008396:29000788..29005664 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29000788..29005664 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcacggcgagcgaactgcgcgctggtgctggtgctggcgctcgcgctgttggcggcgcgggatgctggtgccgcggcggtgcccaagcccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacggccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatctgggacgccttcgcgcacaccccgggaaatgttgcaggaaatcagaatggagatgttgcgacagatcaatatcatcgctataaggaagatgttaatctcatgaaaagtttgaattttgatgcctaccggttttcaatctcatggtccaggatcttcccagatggtgagggacgagttaaccaagaaggcgtagcatattacaacaatcttataaactaccttctgcagaaaggtatcactccttatgtcaatctttaccactacgatctccctcttgcgcttgagaagaagtacggaggctggttgaatgcaaaaatggcggatctattcacggagtacgcggacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagccaaggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaatgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctcttatcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcagcaaggcaaagttggaatagttctggacttcaattggtatgaagctctttccaactcaactgaagaccaagcagcggctcaaagagccagggacttccacattggttggtatcttgatccattgataaatggacattacccgcagataatgcaagatcttgtgaaagataggctgcccaagttcactcctgaacaagctagattggtcaagggctcggctgactatattggcatcaaccaatacacagctagctacatgaagggccagcaattgatgcagcagacaccgacgagttactcagccgattggcaggttacctatgtttttgcgaaaaacggcaaaccaattggaccacaggcaaattctaattggctttacatcgtgccatgggggatgtacggatgtgtgaactacatcaagcagaagtacgggaatccgacagtcgtcataactgaaaacggaatggatcaacctgcgaacctcagccgcgaccagtacttgcgcgacaccacgagggttcatttctacaggagctacctcacccagctgaagaaggccatcgacgagggcgccaatgtggctggctacttcgcctggtctctcctggacaacttcgagtggctgtcaggttacacgtccaagtttggtatcgtctacgtcgacttcaacacgctcgagcgccaccccaaggcgtcggcctactggttcagggacatgctaaagcactga</cdnaseq>

Protein Sequence

<aaseq>MAARRANCALVLVLALALLAARDAGAAAVPKPNWLGGLSRAAFP KRFVFGTATSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRYKEDV NLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYD LPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN PPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYE ALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGS ADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPW GMYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAID EGANVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLKH</aaseq>

Gene Sequence

<dnaseqindica>4318..4586#4103..4205#3938..3969#3628..3845#3373..3488#2876..3119#2417..2504#2226..2297#2045..2120#1228..1286#104..341#gtgcgtgcgtggctgcgtgtgcttgcgctactgcttggtctcactgtgtgaacaactgctgccgccgcctgccggcggtgtgctccggccgcgcgcggtcgtgatggctgcacggcgagcgaactgcgcgctggtgctggtgctggcgctcgcgctgttggcggcgcgggatgctggtgccgcggcggtgcccaagcccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacggccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatctgggacgccttcgcgcacaccccgggtaaaactgcgattagtcgcttgctctactctacttttgctgtcactcagttttaactctgcttcttggcttcgaaactgtgattttcttttttccaaaccgctatggcagtttcggtattcaattacttacagttgcagtacaatacactacttagtgcccaaaaatatatatttcacaaatcacaactgttagtctactatacagcggccccgtttggatccggagggctattaaatagccctccggaatcttgctatttaaaagtattaaacgtaggttaatgacaaaacccattctataacccctaggctattttgcgagacgaatctaacgaggtatattaatccatgatttgctacagtaatgctacagtaatcagccgctaattatggattaatatacatcattagattcgtctcgcaaaatagactaggggttatggaatcggttttatcggtaatctacgtttaataatcctaaatagcaagatttcgaagggctatttaatagctcggaggatccaaacaaggccagcatctgagtaaagtactcaactcaacagccactagatgacagaatggtgacatacggctaaatgattatgacatttgtgaacgacagtgctacaattaagacacagcttgctagaattatgtgccaaattggaatgttgaacagcgaccaattcgatgtggaacgttgaccaatatctgtgcatctttatccttatatactccactacagtggtagctgaatactacttgagttttagtttaaactgacattcttgtagatcttgagccgtcaatcatgtgaattgtgatcaacttgtcaagctcacccataataatatattttttttattttacatttcaatgaacaggaaatgttgcaggaaatcagaatggagatgttgcgacagatcaatatcatcgctataaggtactagtccacagggtttacattaccgtcggtaaccgcgtggttaccgcggttactggccttaccgcggggtacggtaatagaaaaaccacgataacctccttaaattcaaataaatttaaaaaataatttaattttttgataaattttgcacggtttcgtacggtttttcacgattacagcggttaccgcacggtaaccgtgcttaccgccagggcacggtaaacccggccccggcggtttgggaaaccctgctagtacatcacaaagtcctctgcgttggtatgcctggcactaggcataactggttttttttattccatccggtcataaaaagtttgaccaaaccttatcctaaacgtcaaatattttttatcgaatggataaaccaaccatgcaacttttgaaaaaaaaagtagttttgtttggagtcctctagctaatttggtgcttttcctacttttacttccttttggggaggatggggctggggttgtatcttcctttggtaaatagaaagggcatgtgtgcccagatttgtctttcatcagataattgctcccccagatttgctaagtaaatgaaacttctgtacttcaagataacactacagatcacaaaacagctggtataatggcacatctctatgcattaataactgtaaatgctctaaaatatgcgtgtccaaggtcttacattacatgtaagtgtttccattctccattatctaaaaaaaaagtgtatccattctggaacaggaagatgttaatctcatgaaaagtttgaattttgatgcctaccggttttcaatctcatggtccaggatcttcccaggtacattgagtctgactcagattgtagcatgttgccctgataccctgcatcattttttttaatgacaatttgttactgccaaatatgcgcctttggtgtacctagatggtgagggacgagttaaccaagaaggcgtagcatattacaacaatcttataaactaccttctgcagaaaggtaccgcttgatctcatacttgaatcccctgcaaaagaaaaagatctcatacttgaaactttcaaacttccatggaaactgagtgctgtataactaaatatttccttcaaaccaagcaggtatcactccttatgtcaatctttaccactacgatctccctcttgcgcttgagaagaagtacggaggctggttgaatgcaaaaatggcgtaagtcaaattagtaatttatcctagctttttgtctgttaatctattagaactctcgtcatttgttggttattgacttattttagacttggttttaaacatagaagcacacatgataagtatgaatgcttgggacaaaattatcagtttcttaacacaaaaattcctgactaaaattggctccaattctagacaaatgacaattattatgaacgtgaaagttctattgttctgtcaaaagaaagctgcactgcattatgattattggtacctgttgtctagctaaatgcagcatcctgtatctctggcatcactagctgtataagtaacactctgaagtctggattatcttcatactacttgttctgtagggatctattcacggagtacgcggacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagccaaggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaatgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctcttatcacatgctgcagctgttgcaagataccggactaagtatcaggtattttttctcgacttgttttttagataatttaagctttattgaactcagtcaattacatcaaagtgatacaatcatactaagaacacttctgacctctgcacaacaaagatgcacacaaccaaaacacccacccacatactagtttgaaaagaaagaaaaaaaacagacaattaagggccaactgtttttttttaacggatatctcctactggccagtctaaatttgggaaatataatttcaaaaatgtaggcagctcagcaaggcaaagttggaatagttctggacttcaattggtatgaagctctttccaactcaactgaagaccaagcagcggctcaaagagccagggacttccacattggttggtaagaccataaagaatatcctctcagaaagcctattttttttagataatggaagctttattaatctcagtaaattctatcgagcttcattgaaaaagaattatcattgttaggattgctaacggttgcaatggtccaggtatcttgatccattgataaatggacattacccgcagataatgcaagatcttgtgaaagataggctgcccaagttcactcctgaacaagctagattggtcaagggctcggctgactatattggcatcaaccaatacacagctagctacatgaagggccagcaattgatgcagcagacaccgacgagttactcagccgattggcaggttacctatgtttgtgagttccttgcctcgcctcgccttgcgcttgtacatcagtatcgttgctagacatattctcctaaatattttatcccctaaattctgcagttgcgaaaaacggcaaaccaattggaccacaggtatgcagtaatcagttgtatccttctccagcttcagattcttctagcactgcattctactgacgtgaccaaactgataaattcagaagtaacataactcataaaacctttgttgatccatcgatctttacaggcaaattctaattggctttacatcgtgccatgggggatgtacggatgtgtgaactacatcaagcagaagtacgggaatccgacagtcgtcataactgaaaacggtagctctgaacttctcccatatccctccattcgattttccgctccatattgcacaatctgcgtgtaatccagaagtgatgaacatatcaacatattccatcttgtcatcaggaatggatcaacctgcgaacctcagccgcgaccagtacttgcgcgacaccacgagggttcatttctacaggagctacctcacccagctgaagaaggccatcgacgagggcgccaatgtggctggctacttcgcctggtctctcctggacaacttcgagtggctgtcaggttacacgtccaagtttggtatcgtctacgtcgacttcaacacgctcgagcgccaccccaaggcgtcggcctactggttcagggacatgctaaagcactgagaatgaaagacacgcagactgaagttgaagttgccatccattgatcatcatgttcagttctaggctgccgcttggatggcatcagagctggctatgaactatgtgatggaaataaaaggactgcaaattgattcgattatgcaattcgtgtctatgatcagaattgtggccgtctagtgaacttgtagaagtgtactcttgatgtgtgatcgatcttgagtaatcaatgtttgatcagatttcgccttataatttattagttgatgagatttggcttggtgattttatagg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0703000, RefSeq:Os03g0703000