Os03g0703300

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0703300| Description = Calponin-like actin-binding domain containing protein| Version = NM_001057551.1 GI:115454830 GeneID:4333844| Length ...")
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Gene Name

Os03g0703300

Description

Calponin-like actin-binding domain containing protein

Version

NM_001057551.1 GI:115454830 GeneID:4333844

Length

5854 bp

Definition

Oryza sativa Japonica Group Os03g0703300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29021027..29026880

Sequence Coding Region

29021333..29021468,29021568..29021737,29021844..29022530,29022677..29022826,29022940..29023071
,29023476..29023626,29024285..29024376,29026510..29026617

Expression

GEO Profiles:Os03g0703300

Genome Context

<gbrowseImage1> name=NC_008396:29021027..29026880 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29021027..29026880 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggacggcgcagcagcagcagcagaagcagcagggcggggtggtgcgcgtggaccaggcgtcgcccgcgtccagcttccgcgagctcgacgacgccttcctccagacacagacaaaaatctggcttggtgaagttctccatcttaggtttgatgaagccgttatagttgcagaccttcttgctgatggagagttactatttcaagtttccaaagtactgtggaaaaggcttgtgagaatgaacaaagaacaaatgaagcaatccaaggtgtatatttatgagagaacatcgtctggtaagagcaatggaaaatacatgccctatccaaaagttgactcgtttttgaagatatgtcaaattctcgggttagctggaattgatttgtttaccccttctgatgtggttgagaaaagaaatgttcggaaagtttgtatgtgcatacgcttgctatctaagaaggctcggacgatgcgcctgactgtgcctgattttgatattgtcactcatacaatagccatgcccaactacattgttggaggcatccggagaagtctggagcaaccacaatgtagttcatctggttcaagtggttacagtccaagtgccaactctaaggcattaaatcagcagagagtttttggtgcagagaatgatcaacaatgtgaaacacattatgattctgatgaagctgaaagtaagctctctgcattagaacctgaggactcagtcagtgaagacaatatttccacacttttgaaatcgggcaacatgcccaaggaagaaaaggaaggctatggagatagtgagcatggtatgcatgaagagaagtcattgtctgaatcagttggatcgattgatttcggcaatatggaatctgattctgttggttcaactcctttatttcacaaaaatgaatcatattgctgtattgaatctccaactgaccagtgttcaagaactagaacaattaggtgttcattaagttcagaagagtcagattccataagcagtcatttggtagttgacagcagcaaggctaaaaggactcatggcgaacatctcgagcctcttaacggaaatgggaaaagatttgctaacgatcccgaaaaagaaagcgatgccctccaaaaggtcacctttgatcaacaatgtgatctgcttgcctgtgatggggagtctgtatgttcaaattgcgacagtacaccatactcgagtttaaccccaatagacagtgcttgtggcaaattgccagcagtttctgaagatgatagtgcatgccgagggctggaactcgaattccgttgtgggaatgaaacggacgtttcccaaaaagaagataaacaggtggaatcagaatataaagctgaaaatgacagctctgctcaaatgaatgagaatgatgttcccaaatcagggaaagggatgctaaagtctgttgctggaggaattacacttgtcggcgcagtgttcttcatagctcatctcagaaggagcaaggacagaagcttcgcaggtgttatagctccattctctgaaaaatcagttcagggcgactcaagggcaaagaaagtagagaaaacaaaggcgggtgccgtgtatcccggggaatggctaaaagtttaa</cdnaseq>

Protein Sequence

<aaseq>MRTAQQQQQKQQGGVVRVDQASPASSFRELDDAFLQTQTKIWLG EVLHLRFDEAVIVADLLADGELLFQVSKVLWKRLVRMNKEQMKQSKVYIYERTSSGKS NGKYMPYPKVDSFLKICQILGLAGIDLFTPSDVVEKRNVRKVCMCIRLLSKKARTMRL TVPDFDIVTHTIAMPNYIVGGIRRSLEQPQCSSSGSSGYSPSANSKALNQQRVFGAEN DQQCETHYDSDEAESKLSALEPEDSVSEDNISTLLKSGNMPKEEKEGYGDSEHGMHEE KSLSESVGSIDFGNMESDSVGSTPLFHKNESYCCIESPTDQCSRTRTIRCSLSSEESD SISSHLVVDSSKAKRTHGEHLEPLNGNGKRFANDPEKESDALQKVTFDQQCDLLACDG ESVCSNCDSTPYSSLTPIDSACGKLPAVSEDDSACRGLELEFRCGNETDVSQKEDKQV ESEYKAENDSSAQMNENDVPKSGKGMLKSVAGGITLVGAVFFIAHLRRSKDRSFAGVI APFSEKSVQGDSRAKKVEKTKAGAVYPGEWLKV</aaseq>

Gene Sequence

<dnaseqindica>5413..5548#5144..5313#4351..5037#4055..4204#3810..3941#3255..3405#2505..2596#264..371#ggggcagcgccgcgcttatccggcgcaggacgcgacacgcggccgcggcgtcgcctccaaaccacacccccacgcacgcacgcacgagcaccaccaccaccaccaccaccgccatagctagccgctgaagccagcagagcagacgaggaaaccgaggctccaggggtgagtgcgagcgcggcgaccgaggatctatctgggatgagccacctcgggcgccgggccgcttcgtgatcggcggcgggcggcggcggagggacgcgatgaggacggcgcagcagcagcagcagaagcagcagggcggggtggtgcgcgtggaccaggcgtcgcccgcgtccagcttccgcgagctcgacgacgccttcctccaggtcggtcgcggtgccggcgaaatgcgccgtgtactgaactaaatcttgtgtgtgcttcagtcgggtcgtcggagtccgggttaatggaacagtaaaggccgtggccggccggtggctctgttggcgacggccggcgttcgtcggcgccgttctctccaatgggcgccggagatgctccagtgattcgagctgccttcaatgagttcatggcttgatgctatctgtttcgggttttccatccgcatgttgtatatgcgagatgtttaggattggtttctctgatttcacggactccaaatggcatatgcgggttgatttctgaagttactaaactgccgtgtgattgctctctcctcttagctaattcaaaatccagtatcaggcatttcatgttgttcatttttctagtatgagaagttcagaacgacggcgagaggatttgtgaagatgcaaaggcttcgacaccattgccgctcttgttttcattgatagtagagttttcaagaagaacatggtggcagctcttcaaagaaatcactgaagaagcagttgtgctggtgcaggagtttcagaagtttgagtagttctttactgcatttcgccgtcctttttatcgcaaaattagtcgttagattctgtctagatttttctcatttttcaataataagcgagcctcttgcgtatttaaaaaagggccatttgtaaatttaccaccgttttttttaaattttacaaggatgccactcgaatgacaattctaatggcatttttgcaattttctagtggcagtcttgcaataacgattcaaagcagtggtaaatttgcaattgccccttaaaaataagtaatatatgaggaagttgcaggggggcaaacgagaatggattactagttgacaagattctgtgtggtcatggttgtacaagattcttttcaactctttctttgtcttttctagggcaaagggttattttgtactcctacttgcatttcatatcctcctaggttttttcagagccagagttgaaaaatggtataaaaggtagaattgaatggtattggtattgattagctcatgttgaagtatcttttgataaatttattatgttaccagtcttagcagctgttgctcatttgtcgagtaccgaaatggccaatgctggaatcactttacataatattgttaacttagtccttgtgtggtgctcaacgtacttggcaaaaagattacaatgatgtgctttaatatttatcttacaagaaattacacaaagttagtcaaagacatgaatgcagccactacgtactactgtagctactgcaatagtttgggatgttaaggagtatatttggaccacaaactttcaggtttactctacattttttttcattaaaaactgtgagcgataagtatgagatatacattccattcgacattttaagatctgttaaacacttaaacttaaacatcaaattttgaatgggatgtatctaactttattacttgcaaacatatactaagttatattgcacacagtgttatggtacaaatatatatcctggacacaactacagttgttcataatttgtacactgtcactctcaaccctgtacttctatattattttcttcaggaattggtgattacgaagatcatctgatatccttatttaagataacatattaaaccttttcttttgcttatcacccatctattataaacagtcttatagatattgggtctactgatctgtataaaggatatggttaccttacttattactgtataggagtagttaccaatgcagatgcattatcggtcgtttaggcaggtcagtacctgctaccaatttttacaatattttttttcgccgggctggcaaagtcgccagccggagtatattaaggagtgcaagaatatatcttgtttcctaccatgccaagcaacagagcacagggcgcactacaacatatatacagaacaacttctaattacatacaagcggggcaaccccgaaatatctcaaagccttcaattacacctttattaagtaaaagcctacaattacacctttatcatacttttagtcatccttattatcctgatttctcagttcaattatgttctttcagacacagacaaaaatctggcttggtgaagttctccatcttaggtttgatgaagccgttatagttgcagaccttcttgctgatggagagttactgtaagatttaggttcttcacaatagatgcagtgttttttatttgtatttatagtactgtctagcatgcaatcctgatacttggtgtcacttggttggcttttgtaagaatttacaattctgtaactctacatggtaaaattacacaaatataagatcagagtcactaatatacttcaaatgataggtagttttggctatatgaaattagtaattagccttaagtttccactataaagtttcaatgctgtaattgtacatggtaaaattacacaaatataggatcagagtgacgaatactatacttcaaatgataggtagttttggctatatggaattagtaattaggcttatgtttccactataaagtgttacccagaaaaaaatcatataattggcaaatgatacaatttattgttgggcagcaagcaattcagttctatattacattttttacattttcctattctagatatgttctatcttgaaacaactgaaggtaattcttaattagaggagcaatgaaataaattactatcatatttattctcttatttttgggaagaataaaaagacagccctctccctgtgtttcctttccaggctctaaatctcttttcaggctgtctaatggcttacttgtttaatgcatgttgacagatttcaagtttccaaagtactgtggaaaaggcttgtgagaatgaacaaagaacaaatgaagcaatccaaggtgtatatttatgagagaacatcgtctggtaagagcaatggaaaatacatgccctatccaaaagttgactcgtttttgaaggtattgaccattggatgctctcttcttagcagcttactttagttactatcttgattcaacttcaagcgcattaatttggataacagtagagtgaaagaattcatgggatttttttttgccatcacacatacatttactctttctcttttcattgaaagagtgcttgttaatggtgtcaaacatttctattctagccgagaaactggtatagattctccaaatattcttaacaaagctttactttctataaattggatcgaaatcattttttatgtgcagagtacatgctgaatctggatggctgtcttgcttctgaattctgatagcattcccatatcttttactttcttgatgtttgttttcccttctgaaaggtggcttgatatgatatttttcctttccagatatgtcaaattctcgggttagctggaattgatttgtttaccccttctgatgtggttgagaaaagaaatgttcggaaagtttgtatgtgcatacgcttgctatctaagaaggctcggacgatgcgcctgactgtaagccctagattcttatgaaaccatttattaaaaataattcaatcagctaatcattgcacaatacacatcctgaaagatttaattggtgtgtttctgctctctggtgacaggtgcctgattttgatattgtcactcatacaatagccatgcccaactacattgttggaggcatccggagaagtctggagcaaccacaatgtagttcatctggttcaagtggttacagtccaagtgccaactctaaggcattaaatcagcaggtaagctatttgaaaggatcagtttttttttttggggagaaaggatcagttttattggcatgttcttgctaattgatcctttattttaagtcaatactatcattgtttaaaacaatcaactcattaattttgatatatatttccagagagtttttggtgcagagaatgatcaacaatgtgaaacacattatgattctgatgaagctgaaagtaagctctctgcattagaacctgaggactcagtcagtgaagacaatatttccacacttttgaaatcgggcaacatgcccaaggaagaaaaggaaggctatggagatagtgagcatggtatgcatgaagagaagtcattgtctgaatcagttggatcgattgatttcggcaatatggaatctgattctgttggttcaactcctttatttcacaaaaatgaatcatattgctgtattgaatctccaactgaccagtgttcaagaactagaacaattaggtgttcattaagttcagaagagtcagattccataagcagtcatttggtagttgacagcagcaaggctaaaaggactcatggcgaacatctcgagcctcttaacggaaatgggaaaagatttgctaacgatcccgaaaaagaaagcgatgccctccaaaaggtcacctttgatcaacaatgtgatctgcttgcctgtgatggggagtctgtatgttcaaattgcgacagtacaccatactcgagtttaaccccaatagacagtgcttgtggcaaattgccagcagtttctgaagatgatagtgcatgccgagggctggaactcgaattccgttgtgggaatgaaacggtacctcctgaaatgccaaacctgtgtatgctagtactacttttaacatagtcatcattttgtctcatgtacagcaaacacgctttaacatttctttggcatccaggacgtttcccaaaaagaagataaacaggtggaatcagaatataaagctgaaaatgacagctctgctcaaatgaatgagaatgatgttcccaaatcagggaaagggatgctaaagtctgttgctggaggaattacacttgtcggcgcagtgttcttcatagctcatctcaggtaatggtaccacagtatcaaattatcgtcgtgtgccgtttggtgtactgaacactaatactcctatatattatgaaattaatccaaactttgctgcagaaggagcaaggacagaagcttcgcaggtgttatagctccattctctgaaaaatcagttcagggcgactcaagggcaaagaaagtagagaaaacaaaggcgggtgccgtgtatcccggggaatggctaaaagtttaatcaagaagaacggacatgccacggtgccacctaagcgcaatttggaagtttattttgcaatatgcatacatcttgtaaaagtaaaatccatatgctaaagaacacttttttttaatcagctactccagtttgcacgagtagagggctttaagaagcgactccactagtatagcaagtgttaatatttattttcttatagcagtccaaagcttacaataatctgtaatctggataaacaagatgcctcaagttctctccatgtacagaatgatccatgaagttgattaatttattataagcagcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0703300, RefSeq:Os03g0703300