Os03g0704200

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0704200| Description = Zinc finger, MYND-type domain containing protein| Version = NM_001186674.1 GI:297722478 GeneID:9266585| Length = 390...")
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Gene Name

Os03g0704200

Description

Zinc finger, MYND-type domain containing protein

Version

NM_001186674.1 GI:297722478 GeneID:9266585

Length

3902 bp

Definition

Oryza sativa Japonica Group Os03g0704200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29068798..29072699

Sequence Coding Region

29071502..29071515,29071586..29071640,29071760..29071894,29072050..29072195,29072412..29072586

Expression

GEO Profiles:Os03g0704200

Genome Context

<gbrowseImage1> name=NC_008396:29068798..29072699 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29068798..29072699 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacttattccttttttttttttcgaaccttctcgagaggagaggcgtcggggcggggggaatggcgtcgtgggaggagcagctgcgggacgagctcgccggccgagacctcgccgtcgcctccgtccccgggaagggccgcggcctcttcgccgcacgcagcttcttcccaggagaagtcgttatttcgcaagagccttacgcttctacaccaaacaagatttctgtgggctccaactgcgacaattgtttcgcctccagaaacctgaggaagtgctccgtttgtcgagttgcttggtactgtgggagtgcgtgtcagagagaagaatggaagcttcatcaacttgaatgtcgagcaatcgccgcgcttacagaggatagaaagaagatgcttactcccacaattcgtttgatggtgcggcttgtacttagaagaaaactgcaggatgacaaggctattccatcttcaggaacagataactacaatctagtggatgcattagaatcccaccgcataatatag</cdnaseq>

Protein Sequence

<aaseq>MNLFLFFFSNLLERRGVGAGGMASWEEQLRDELAGRDLAVASVP GKGRGLFAARSFFPGEVVISQEPYASTPNKISVGSNCDNCFASRNLRKCSVCRVAWYC GSACQREEWKLHQLECRAIAALTEDRKKMLTPTIRLMVRLVLRRKLQDDKAIPSSGTD NYNLVDALESHRII</aaseq>

Gene Sequence

<dnaseqindica>1185..1198#1060..1114#806..940#505..650#114..288#gtaggcgccacgtcagccaaaaccgctcttaaaaccaccgagggatctcatctgcaccggttttgatagttgagggacccgttgtgtctggtttttcggttgagggacctcaaatgaacttattccttttttttttttcgaaccttctcgagaggagaggcgtcggggcggggggaatggcgtcgtgggaggagcagctgcgggacgagctcgccggccgagacctcgccgtcgcctccgtccccgggaagggccgcggcctcttcgccgcacgcagcttcttcccaggtaaacccaacccccccttctctgatcgaaaggcgggcgctgtgccatggtggccaagcaaggcagggggcggctgctcgcgaaccgctcggcgaaatgcccaggcggaaggcttgaggccatccgtagtggatgctgctgcaatgcggtttcattgagttgggattatggttcctgttgccgcgatgatgatgatggggggttctgcgtctgcaggagaagtcgttatttcgcaagagccttacgcttctacaccaaacaagatttctgtgggctccaactgcgacaattgtttcgcctccagaaacctgaggaagtgctccgtttgtcgagttgcttggtactgtgggagtgcgtgtcaggtgctgactctgtccttcaactgttacacgcatttgatatgcagagacttgcttttgtgatcatgtgctgtgcggagactgttacatgcattatttatagtgattcctcttgctttcaatggtgtaacttttttggcgatatgttgctaccgcagagagaagaatggaagcttcatcaacttgaatgtcgagcaatcgccgcgcttacagaggatagaaagaagatgcttactcccacaattcgtttgatggtgcggcttgtacttagaagaaaactgcaggatgacaaggtattgtctagttgattgatgtaaaaatataatgcatcatgtcaatgatgatatttttgtatacatggcatgttgaagttttctgcatgttggtaacttgatattggttgttttgccaggctattccatcttcaggaacagataactacaatctagtggatgcattagaatcccgtatccttcccttttgatacatttgatccatgacaaatatattgactttgattttgtgaatgttttattgaccgcataatatagacatctccgaggttgataaaaatcaactggttttatatgctcagatggccaatcttgtccaactgattcttccttcattcgagcttgatcttaaggaaattacacataccttttccaaggtaatgctactcaaagtcataaggttataaaaaatgttttaactactatagaagacaatgtatccaatgaataattgagcttaaaaaatacagttgtttcctggtgttatttttgagattttgcttgtaccttccatctaaaacctattgggacctagttggatgtgattaattttgttccaaaaccatgaggatccaagttatctaggacacctccctgtggtcttatactcttatttgagtatagtagaatcgtgtcttgaatctgccttttgaaaaataaaccagaataagccaagaagctttggaaaaaaaaagaataattgttctgtccatgtttattcttccgtttttcatatttgttgtcttccagtctcacccttaagcagtggctaggactattttggtgattatctggctagacctttagaagtaagcatgaataatatatcctctgcctcatatgtgcagtttgcctgcaacgctcataccatatgtgatcctgaactgaggccccttgggactggactataccctgttttatctattattaaccacaggtgatatactattcctttattcatcgtttagcatcttcctccgattttatcatttaataaataattattattgcatctaccctttcctggtatacttagttgtgtaccaaatgcagttttgatatttgaaggtcggacagcatatgttcgtgcattgcaacctataagtaaaaatgaggaggtaatgaatatacttttgtttttttccttattatcatatattcctctgcttgcaatccatgtttcttggggtttcttctctgggcaatgtcagttacgcatctttggttaggtatcaataagttacattgaaactgcggcaaccactatgaagagacaggacgatctcaagcactactacttcacttgcacatgtccccgttgtgttaaggtttttgatttcattgcttactattcttggatgtcctatgggaagctgacacattcttgataatgaagtgttctctagctataattttttccccaaccttacaggattctgaggaagatgcgctccttgagggatacagatgcaatgaccaaaagtgtgatggatttcttctgcctaatgcaggttggttaacatcacgaaggaaaaatactaactgaagagatgtaatagattggattattcaaacataatgtcagctgcagctttaatactgtttcagttatcattgatcttacatttttatctggatttaacatctgtaggaaacaaaggttatacatgccagaaatgtagcacttctagagatggggaagagttacaaaagatggctagcgatgtactactattatctgacaaagtctcttccttagtttcatctggaagtatcctttttcactattactagatgctatctgaggcaaatgtatataattattgcatcatatttttttgtgattttgtaaaatgctaccttaactttgggcagtagataacagtgaggtaggttctatgtacaagaccattgaagagctagagcggaagctttaccatcctttgtcaatcactttgcttcacacacgggaaacactcttgaaggtatattttcagcattaacagtaaaaataacctgctagggtacagagcacaccatctagtatgattaaccacctattatttgtgcagatatatatggagttacaagattggcagactgcattgatgtattgcagattgacaattccagtttatgaaagtaaggcacttctcttcttacagcgtgcagtctcacacttacataaaactcaatgatcactaatgttgttgcacttctgccaggaatttacccaccttttcacccaatgattggattacagttctatacttgcggaaagcttgaatggtatggaatacttttccctattcacctacttactgtgttcatatatcgcggagtaacaactttcattgtccagtataagctttggcctttggctatttcatgttactaaaacaagttagctgaattaatgctagtaggatagctggatagggacatgctttttcaaaagcttcagtgaaatgctgtcaatagcttacccagaagtctgttcgaaattccttgagtcttgaatatttgtacccttaaagggtcacactcatgatgtttacagttacatctagatgttcctgttgcaggttgcttgagtacacagaggatgctctgatgtctttaaccagggcagcagatatacttcgcataacgcatgggactaaatccgagttcatgaaggaacttttgggcaagctagaagaagtaagggctgaagcttcttttaggctctcggctggagatgaacaataattgagtaaccattttattgtgaagctccaggtcatcgtgatggcaaatagaatgtaacaatgttgcaacaatgttcaaataggatagtactaagtagacaatctctaaatttagaatagctttgttaattcaacattgggatataagctgccctgaagggctcgcatcgggacaagaactgtgaactggtgatatggaaaattcattgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0704200, RefSeq:Os03g0704200