Os03g0708600

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Revision as of 12:55, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0708600| Description = DEAD/DEAH box helicase, N-terminal domain containing protein| Version = NM_001057573.1 GI:115454874 GeneID:4333866| ...")
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Gene Name

Os03g0708600

Description

DEAD/DEAH box helicase, N-terminal domain containing protein

Version

NM_001057573.1 GI:115454874 GeneID:4333866

Length

2961 bp

Definition

Oryza sativa Japonica Group Os03g0708600, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29328776..29331736

Sequence Coding Region

29329464..29331674

Expression

GEO Profiles:Os03g0708600

Genome Context

<gbrowseImage1> name=NC_008396:29328776..29331736 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29328776..29331736 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcgcgccgccgacgggatggagaagcccaagttcctcacgcgggaggagcgggagaagctggcgctcgagcgccgccaggccgccgtcaccgaccagcgccgctccgccctcgacctgctccagtcgctcccccgcccccctccgccgccgccgcctcccctttccaacccccctcgcgactcctcctcctcccaccaccgcgactcctccgaccgtgaccgtgaccgtgaccgggaccgggatcgggacagggaccgggaccgtgaccgggagcgccgccgcgacgacgactcccgccgcgaccgagatcgggatcgggaccgcgaccgaggcgactcctcccgccgcgaccgcgacagggagcgcggtgaccgcgaccgcgaccgtgaccgggagcgcggggacagggacagggagcgaggggacagggagaaagatcggctggagaagatggcggagagggagcgggagaaggagctggacgcgatcaaggagcagtacctgggttccaagaagcccaagaagcgggtcatcaagccgtctgagaagttccgcttctcgttcgactgggagaacacggaggacaccagccgcgacatgaactcgctctaccagtcgccccacgaggcccgcctgctctacggccggggattcctggctggcattgatcgccgcgagcagaagaaggtggccgccgcgcatgagaaggagacccgtgccgagcagcggcgcaaggccggtctggatgaccgccctgaggacgacgcagttgataagaaggaggctgatgctgcagcgaagtatgatgccttcgacatgcgcgtggacaggcactggactcagaagtctcttgatgagatgacggagcgggattggcgtatattccgtgaggacttcaatatatcctataagggttctaaggtaccccgtcccatgcggaagtggtctgagagcaagcttggtactgagctgcttcgtgctgtcgagaaagctgggtacaaggaaccttcgccgattcagatggcttccattccacttggtctccagcagcgtgatgttattggtattgctgaaacaggctctggcaagactgctgcttttgtgctccctatgctttcgtacattacccgcctcccacccataagtgaggaaaatgaggctgagggtccttatgctgttgttatggcacctactcgtgagcttgctcaacagattgaggaagagactgtgaaatttgcgacctatcttggcattaaggttgtgtctatcgttggtggtcaatccattgaagagcagggttttaagattaggcagggctgtgaggttgttattgcaactcctggtcggcttcttgattgcttggagaggaggtatgctgtgctcaaccagtgcaactatgtggttctggatgaggctgataggatgattgatatgggcttcgagccgcaggttgttggagtccttgatgctatgccatcgagtaacttgaaacctgagaatgaggatgaggagcttgatgcaaaaacgatctataggactacctatatgttcagcgccactatgccacctgctgtggagcggcttgctaggaagtacctgcggaacccagtcgttgtcacaattggtacagctggcaaggccacagatctcatcacacagaacgtgatcatgacgaaggagtcagagaagatgtcaaggctccagaagatactcacagatcttggggataagccagccattgtgttctgcaacacaaagaaatcagcagatgctcgtgcgaaggatctagacaaggcaggcttccgcgtcacaacactacatggtgggaagtcacaggagcagagagagacgagccttgatggatttagaaaccggcggttcactgttcttgtggcaactgatgttgccgggcgtggtattgatattcccgatgttgctcatgtcatcaactatgagatgcctagttcaatcgatacatacacacatcgtattggaagaactggacgtgcaggaaagaagggattggcaacttcgtttttaactctggagaacactgacattttctttgatctgaaacagatgcttatacagagcaacagtcctgtgccacctgaacttgcaaggcatgaagcatccaaatttaagccaggctcagttcctgatagacctccaagacgaaatgacacagtctatgcaactcactga</cdnaseq>

Protein Sequence

<aaseq>MKRAADGMEKPKFLTREEREKLALERRQAAVTDQRRSALDLLQS LPRPPPPPPPPLSNPPRDSSSSHHRDSSDRDRDRDRDRDRDRDRDRDRERRRDDDSRR DRDRDRDRDRGDSSRRDRDRERGDRDRDRDRERGDRDRERGDREKDRLEKMAEREREK ELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQSPHEARLLYGR GFLAGIDRREQKKVAAAHEKETRAEQRRKAGLDDRPEDDAVDKKEADAAAKYDAFDMR VDRHWTQKSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAG YKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGP YAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPG RLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD AKTIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMTKESEKM SRLQKILTDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSLDGF RNRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFL TLENTDIFFDLKQMLIQSNSPVPPELARHEASKFKPGSVPDRPPRRNDTVYATH</aaseq>

Gene Sequence

<dnaseqindica>63..2273#tcgtctcgtcctccacacaaaccctccccaactccacgaatcccgccgccgccgccgccgccatgaagcgcgccgccgacgggatggagaagcccaagttcctcacgcgggaggagcgggagaagctggcgctcgagcgccgccaggccgccgtcaccgaccagcgccgctccgccctcgacctgctccagtcgctcccccgcccccctccgccgccgccgcctcccctttccaacccccctcgcgactcctcctcctcccaccaccgcgactcctccgaccgtgaccgtgaccgtgaccgggaccgggatcgggacagggaccgggaccgtgaccgggagcgccgccgcgacgacgactcccgccgcgaccgagatcgggatcgggaccgcgaccgaggcgactcctcccgccgcgaccgcgacagggagcgcggtgaccgcgaccgcgaccgtgaccgggagcgcggggacagggacagggagcgaggggacagggagaaagatcggctggagaagatggcggagagggagcgggagaaggagctggacgcgatcaaggagcagtacctgggttccaagaagcccaagaagcgggtcatcaagccgtctgagaagttccgcttctcgttcgactgggagaacacggaggacaccagccgcgacatgaactcgctctaccagtcgccccacgaggcccgcctgctctacggccggggattcctggctggcattgatcgccgcgagcagaagaaggtggccgccgcgcatgagaaggagacccgtgccgagcagcggcgcaaggccggtctggatgaccgccctgaggacgacgcagttgataagaaggaggctgatgctgcagcgaagtatgatgccttcgacatgcgcgtggacaggcactggactcagaagtctcttgatgagatgacggagcgggattggcgtatattccgtgaggacttcaatatatcctataagggttctaaggtaccccgtcccatgcggaagtggtctgagagcaagcttggtactgagctgcttcgtgctgtcgagaaagctgggtacaaggaaccttcgccgattcagatggcttccattccacttggtctccagcagcgtgatgttattggtattgctgaaacaggctctggcaagactgctgcttttgtgctccctatgctttcgtacattacccgcctcccacccataagtgaggaaaatgaggctgagggtccttatgctgttgttatggcacctactcgtgagcttgctcaacagattgaggaagagactgtgaaatttgcgacctatcttggcattaaggttgtgtctatcgttggtggtcaatccattgaagagcagggttttaagattaggcagggctgtgaggttgttattgcaactcctggtcggcttcttgattgcttggagaggaggtatgctgtgctcaaccagtgcaactatgtggttctggatgaggctgataggatgattgatatgggcttcgagccgcaggttgttggagtccttgatgctatgccatcgagtaacttgaaacctgagaatgaggatgaggagcttgatgcaaaaacgatctataggactacctatatgttcagcgccactatgccacctgctgtggagcggcttgctaggaagtacctgcggaacccagtcgttgtcacaattggtacagctggcaaggccacagatctcatcacacagaacgtgatcatgacgaaggagtcagagaagatgtcaaggctccagaagatactcacagatcttggggataagccagccattgtgttctgcaacacaaagaaatcagcagatgctcgtgcgaaggatctagacaaggcaggcttccgcgtcacaacactacatggtgggaagtcacaggagcagagagagacgagccttgatggatttagaaaccggcggttcactgttcttgtggcaactgatgttgccgggcgtggtattgatattcccgatgttgctcatgtcatcaactatgagatgcctagttcaatcgatacatacacacatcgtattggaagaactggacgtgcaggaaagaagggattggcaacttcgtttttaactctggagaacactgacattttctttgatctgaaacagatgcttatacagagcaacagtcctgtgccacctgaacttgcaaggcatgaagcatccaaatttaagccaggctcagttcctgatagacctccaagacgaaatgacacagtctatgcaactcactgaagcatctactgcagaatgggccaaagatcctccagtattacaagggaacttttggaaacagaaggatctaattctagattagtacttcgaggtacaaacattatgatgattactcgttttttattatatgtctgaaaactatgccctatattgtcatgaatttaggatatgtttatgatggtttagttctggacttatgtatcttttcttattgttggtgatcaatgcaaactctactatggcccatgtagtgcattattttaccgcctaaatatatatcatattttgttatgtttgttgtttacagtagcgtattgcttcagatttgttcttctatcatttttgcagagggcatatattgtatctgatcttcattgtggagattttatgtggtctagcaacattgaatatttgagtccaaagaggtgctaattttctttcttctttcatatgtttttgtacaccgtttggcttggtattcaaaacggagaaatctgtcacctccacctcctgaactgttaaactgcctaaataacccctgaactatctaaaaccgtctgaataacatacaaggtagttttgaaggcttgttttgtatgtggcatgcaggtgtgcactattatttctgtataacgactctcgtgcttgcttctccaaagtttatcctaataaattttctatacccata</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0708600, RefSeq:Os03g0708600

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0708600&oldid=20201"