Os03g0708700

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Revision as of 12:55, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0708700| Description = Protein of unknown function DUF593 family protein| Version = NM_001057574.2 GI:297601548 GeneID:4333867| Length = 34...")
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Gene Name

Os03g0708700

Description

Protein of unknown function DUF593 family protein

Version

NM_001057574.2 GI:297601548 GeneID:4333867

Length

3479 bp

Definition

Oryza sativa Japonica Group Os03g0708700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29334068..29337546

Sequence Coding Region

29334068..29335386,29335481..29336029,29336541..29337546

Expression

GEO Profiles:Os03g0708700

Genome Context

<gbrowseImage1> name=NC_008396:29334068..29337546 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29334068..29337546 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgggcgccgtcgtcgtcaccgcggcgctgtgcaagaggagcaaccgggtcgcgcgggtgctcgcctacgcgctcctcgagtggatcctgatagctctcctcctcgccaatggcgtcttctcctacctcatatcgaggttcgccgccttcttcggcctggcgccgccgtgcgccctctgctcccgcctcggcgtggacagcctcttcgagccccgcggcgaggggcagggcgccggcgcggagcccctgtgccgcgtgctgtgcgactcgcacgccgccgaggtgtcgcgcctcggctactgccgcgcgcaccggcggctcgcggacgccggggacatgtgcgaggactgcgtgtccgcctccgcggcggcggcggcgtcgtcgtggatgaggcggagcgagctcggcgagcgggacctggcatgcgcgtgctgcggcgtcgcgctcgagagcggcttcatctcgccgccgttcttgttccccgcgccggcggcgtgcgacgtggactgtggccacaggagagacgccgccatggcaaatctcaatcgcgatctggtcttcgtgtccgaggagggccctgtgatcgagctcttcgatgagaagccattggaggaggacccgatcggcgccatggctggcttggcagctcaatgtgccgagattgttggcaatgtcctgcagctggtgcctcttgaatcagctgatttgtcaaatgtcagaaagagtgcagtatcatatgaatcccgtggtgaagggaatgatgcaatggatcatgtaacttcgaagcagcgcaatgtggtgctgaagaacatggctaacaccagtgaggataaatccgcggtgtcctctgatgatgatgacaaggtgggtgatatggttagtaagatgatcgacgaagaaattactgcgttagtcctctctcaggattgtattgaggatggattcagctgcgagatagatggggaaaccacggagagcttagctgctgatcatcaacaattttgtgagaagcatagtggattgaaagacaacaaccaggaaatttcaatcgggagtgagatacctgagaatgagcagggtgctgtaaaacaagaattgctttgcgtgctgacaaatccgagggggaatgaatttggtattgacaatttagaaggaaatactgagacagttcatcaggctgatctcaataatggatggaattcgatgccagtggaagctggagtgcatgcctctgaaacttcaactgagaacaatgaggagtggattcagccaggtgagctgagccagaaatcgaatctgatgccgatatactctagggagcatgctgatgaagaaattaaagaggacagaatttcactgactgagataaaacaaggattggactctgtgacaattgattcttgggaagaagttcatttgatttcaaatgatggcaccaaagagaatcaggctgaacagcctgagctgaatcatcaatcaacttttatgacagtacgtgctattgagtatgtaacagacttgtttgatgctaacatcagtgcaggcaacgttaatccaacagaggctgctctaccaagcttacatcaattctcttatggaccatcaacaagcttaaacaaattatgtcctgactataatgatgttgaatcagagagtgctccggatacaccaattcacattgaagatatcgatggtttacatgagttgccagaccataaagcaatgacttctgataccaagtcagttgatctggaaagtattgaactggttagtgttgatcagttaaaatctgctttggcatctgcacataaatctttgagcaccctatatactgagcttgaaaatgagaggagtgcagctgctatcgctgctgatgagactatggcaatgataaatcgcttgcaagaacaaaaggcggcaatgcagatggaggcaatccagtaccagcgacttatggaagaacaatcggagtatgatcaagatgcgctagagaggttgaatgaactagttgtgaagagagagaaggagaaacaagatctggagagagagctcgagttgtacagacgcaaggttcatctctttgaggtgaaggaaaggagaaaaatgtccaggcacaaggctgatgaccacaatgggtcatcctcagcatcatccagtgctgaggacagcgatgaccattcccaaagtttctatgaaggcgatgaatctgcccatggtcttaatggaagcaatggtagtatccctactgatgctgtgttacaagaaactgctaggcatctggggacacttggttgctcactcgcagattttgaggaagaaagactctccatactggagcagctcaaattgctagaggagaggctatttgacctcgaagatgaagattcagatagtgttaagatggacaagcgattatcagaagaaaaccatttgatgggtgcctcaaatggtttctctgatgatgatagcaacttcaaacttcatgacaaaagaaaaggtgtaagctataggggaaaaaagctgctcccattatttgatgacactaccgtggaagatgggaacgacctcctaacaaggcaagatcctgaggcagaccattctacagaaaatgttgtgttggaaccagctaatgagcaagataaacttgcaatagcgcatgaaattgatcaagtccatgagcggctgcatgctctagaggcagacaaggaatttataaaacagtgtgtgaggtctttgaagaaaggagacaaggggtttgatcttcttcaggagatcttgcagcatcttagggacctgagaaggatcgagcagcgtacaaggaactctggagagctctcaccgcattatctgcacccttacacggattga</cdnaseq>

Protein Sequence

<aaseq>MAAGAVVVTAALCKRSNRVARVLAYALLEWILIALLLANGVFSY LISRFAAFFGLAPPCALCSRLGVDSLFEPRGEGQGAGAEPLCRVLCDSHAAEVSRLGY CRAHRRLADAGDMCEDCVSASAAAAASSWMRRSELGERDLACACCGVALESGFISPPF LFPAPAACDVDCGHRRDAAMANLNRDLVFVSEEGPVIELFDEKPLEEDPIGAMAGLAA QCAEIVGNVLQLVPLESADLSNVRKSAVSYESRGEGNDAMDHVTSKQRNVVLKNMANT SEDKSAVSSDDDDKVGDMVSKMIDEEITALVLSQDCIEDGFSCEIDGETTESLAADHQ QFCEKHSGLKDNNQEISIGSEIPENEQGAVKQELLCVLTNPRGNEFGIDNLEGNTETV HQADLNNGWNSMPVEAGVHASETSTENNEEWIQPGELSQKSNLMPIYSREHADEEIKE DRISLTEIKQGLDSVTIDSWEEVHLISNDGTKENQAEQPELNHQSTFMTVRAIEYVTD LFDANISAGNVNPTEAALPSLHQFSYGPSTSLNKLCPDYNDVESESAPDTPIHIEDID GLHELPDHKAMTSDTKSVDLESIELVSVDQLKSALASAHKSLSTLYTELENERSAAAI AADETMAMINRLQEQKAAMQMEAIQYQRLMEEQSEYDQDALERLNELVVKREKEKQDL ERELELYRRKVHLFEVKERRKMSRHKADDHNGSSSASSSAEDSDDHSQSFYEGDESAH GLNGSNGSIPTDAVLQETARHLGTLGCSLADFEEERLSILEQLKLLEERLFDLEDEDS DSVKMDKRLSEENHLMGASNGFSDDDSNFKLHDKRKGVSYRGKKLLPLFDDTTVEDGN DLLTRQDPEADHSTENVVLEPANEQDKLAIAHEIDQVHERLHALEADKEFIKQCVRSL KKGDKGFDLLQEILQHLRDLRRIEQRTRNSGELSPHYLHPYTD</aaseq>

Gene Sequence

<dnaseqindica>2161..3479#1518..2066#1..1006#atggcggcgggcgccgtcgtcgtcaccgcggcgctgtgcaagaggagcaaccgggtcgcgcgggtgctcgcctacgcgctcctcgagtggatcctgatagctctcctcctcgccaatggcgtcttctcctacctcatatcgaggttcgccgccttcttcggcctggcgccgccgtgcgccctctgctcccgcctcggcgtggacagcctcttcgagccccgcggcgaggggcagggcgccggcgcggagcccctgtgccgcgtgctgtgcgactcgcacgccgccgaggtgtcgcgcctcggctactgccgcgcgcaccggcggctcgcggacgccggggacatgtgcgaggactgcgtgtccgcctccgcggcggcggcggcgtcgtcgtggatgaggcggagcgagctcggcgagcgggacctggcatgcgcgtgctgcggcgtcgcgctcgagagcggcttcatctcgccgccgttcttgttccccgcgccggcggcgtgcgacgtggactgtggccacaggagagacgccgccatggcaaatctcaatcgcgatctggtcttcgtgtccgaggagggccctgtgatcgagctcttcgatgagaagccattggaggaggacccgatcggcgccatggctggcttggcagctcaatgtgccgagattgttggcaatgtcctgcagctggtgcctcttgaatcagctgatttgtcaaatgtcagaaagagtgcagtatcatatgaatcccgtggtgaagggaatgatgcaatggatcatgtaacttcgaagcagcgcaatgtggtgctgaagaacatggctaacaccagtgaggataaatccgcggtgtcctctgatgatgatgacaaggtgggtgatatggttagtaagatgatcgacgaagaaattactgcgttagtcctctctcaggattgtattgaggatggattcagctgcgagatagatggggaaaccacggagagcttagctgctgatcatcaacaatgtaaggcactctttcctctgataaacttgcattcatggtattccggtttaccaaatctgtggctataaatatcacctgctattgctttgccacatatgttttaattgtaccgccattttcactacatatatactagttctgttaaccatttcgatactacaatttaatgcagtttctcttgcaaattgtcatgttactgtgatggggatgttcattgaatacccatgcctagatttcaaattttagctattgcaacatcgcttggtactgtagactgtagttggcattcatttttccatcttgcctgtactgccacatttgtactgatgaacctttattgaaagaaaaacgtgaacagcctgaactaactgaatgttgatagggtgaaatggacgttgtaacaaaatagaagtaaactcacgccactaaatgtacttcgagttgttcagtgctggttgttttgtatatttaatgttactatgcaatctgccttgatttttgttgcatgcagtttgtgagaagcatagtggattgaaagacaacaaccaggaaatttcaatcgggagtgagatacctgagaatgagcagggtgctgtaaaacaagaattgctttgcgtgctgacaaatccgagggggaatgaatttggtattgacaatttagaaggaaatactgagacagttcatcaggctgatctcaataatggatggaattcgatgccagtggaagctggagtgcatgcctctgaaacttcaactgagaacaatgaggagtggattcagccaggtgagctgagccagaaatcgaatctgatgccgatatactctagggagcatgctgatgaagaaattaaagaggacagaatttcactgactgagataaaacaaggattggactctgtgacaattgattcttgggaagaagttcatttgatttcaaatgatggcaccaaagagaatcaggctgaacagcctgagctgaatcatcaatcaacttttatgacagtacgtgctattgagtatgtaacagacttgtttgatgctaacatcagtgcaggcaacggtaagaaataagattttaatcatttggtttgtatcttttgttgacttctctagtgtgatcaactgatcatcttttttttttcaaattgatccagttaatccaacagaggctgctctaccaagcttacatcaattctcttatggaccatcaacaagcttaaacaaattatgtcctgactataatgatgttgaatcagagagtgctccggatacaccaattcacattgaagatatcgatggtttacatgagttgccagaccataaagcaatgacttctgataccaagtcagttgatctggaaagtattgaactggttagtgttgatcagttaaaatctgctttggcatctgcacataaatctttgagcaccctatatactgagcttgaaaatgagaggagtgcagctgctatcgctgctgatgagactatggcaatgataaatcgcttgcaagaacaaaaggcggcaatgcagatggaggcaatccagtaccagcgacttatggaagaacaatcggagtatgatcaagatgcgctagagaggttgaatgaactagttgtgaagagagagaaggagaaacaagatctggagagagagctcgagttgtacagacgcaaggttcatctctttgaggtgaaggaaaggagaaaaatgtccaggcacaaggctgatgaccacaatgggtcatcctcagcatcatccagtgctgaggacagcgatgaccattcccaaagtttctatgaaggcgatgaatctgcccatggtcttaatggaagcaatggtagtatccctactgatgctgtgttacaagaaactgctaggcatctggggacacttggttgctcactcgcagattttgaggaagaaagactctccatactggagcagctcaaattgctagaggagaggctatttgacctcgaagatgaagattcagatagtgttaagatggacaagcgattatcagaagaaaaccatttgatgggtgcctcaaatggtttctctgatgatgatagcaacttcaaacttcatgacaaaagaaaaggtgtaagctataggggaaaaaagctgctcccattatttgatgacactaccgtggaagatgggaacgacctcctaacaaggcaagatcctgaggcagaccattctacagaaaatgttgtgttggaaccagctaatgagcaagataaacttgcaatagcgcatgaaattgatcaagtccatgagcggctgcatgctctagaggcagacaaggaatttataaaacagtgtgtgaggtctttgaagaaaggagacaaggggtttgatcttcttcaggagatcttgcagcatcttagggacctgagaaggatcgagcagcgtacaaggaactctggagagctctcaccgcattatctgcacccttacacggattga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0708700, RefSeq:Os03g0708700