Os03g0712800

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Revision as of 12:55, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0712800| Description = Similar to Glutamine synthetase root isozyme 2 (EC 6.3.1.2) (Glutamate--ammonia ligase)| Version = NM_001057602.1 GI:...")
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Gene Name

Os03g0712800

Description

Similar to Glutamine synthetase root isozyme 2 (EC 6.3.1.2) (Glutamate--ammonia ligase)

Version

NM_001057602.1 GI:115454932 GeneID:4333896

Length

3898 bp

Definition

Oryza sativa Japonica Group Os03g0712800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29582853..29586750

Sequence Coding Region

29583115..29583242,29583343..29583403,29583970..29584129,29584234..29584271,29584375..29584428
,29584596..29584670,29584778..29584906,29585206..29585293,29585374..29585480
,29585581..29585629,29585717..29585820,29585950..29585989,29586551..29586630

Expression

GEO Profiles:Os03g0712800

Genome Context

<gbrowseImage1> name=NC_008396:29582853..29586750 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29582853..29586750 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtccctgctcactgacctcgttaacctcgacctgtcggagagcacggacaaggtcatcgccgagtacatatgggttggtggtactgggatggatgtgaggagcaaagccagaacgttgtctggacctgttgatgacccaagcaagcttccaaagtggaactttgatggctccagcaccggtcaggctaccggtgacgacagtgaagtcatcctccaccctcaagccatcttcagagacccattcaggaaggggaagaacatcctggtcatgtgtgactgttatgcgccgaatggcgagccgattccgacgaacaaccggtacaatgcagcaaggatcttcagtcatcctgatgtcaaggctgaagagccatggtatgggattgagcaggagtacacccttcttcagaagcacatcaactggcctcttggctggccactaggtggctatccaggccctcagggtccgtactactgtgcggcgggagccgataaatcgtacgggcgcgacatcgttgatgcccactacaaggcctgcctgtttgccggcatcaacatcagcgggatcaacgcagaagtcatgccggggcagtgggagttccagattggccctgtcgttggcgtctccgcaggggatcatgtctgggtggcacgctacattcttgagaggatcactgagattgctggcgtcgtcgtgtccttcgaccccaagcccattccgggagactggaatggcgccggtgctcacaccaactacagcaccaagtcgatgaggagcaatggcggctacgaggtgatcaagaaagcgatcaagaagcttggcatgcgccaccgtgagcacatcgccgcctacggcgacggcaacgagcgccgcctcaccggccgccacgagaccgccgacatcaacaacttcgtctggggcgtagcgaaccgcggcgcgtcggtgcgtgtcggccgggacaccgagaaggacggcaaaggttacttcgaggacaggaggccggcgtccaacatggacccgtacctggtgaccgccatgatcgccgagaccaccatcctctgggagcccagccacggccacggccacggccaatccaacggcaagtga</cdnaseq>

Protein Sequence

<aaseq>MSSSLLTDLVNLDLSESTDKVIAEYIWVGGTGMDVRSKARTLSG PVDDPSKLPKWNFDGSSTGQATGDDSEVILHPQAIFRDPFRKGKNILVMCDCYAPNGE PIPTNNRYNAARIFSHPDVKAEEPWYGIEQEYTLLQKHINWPLGWPLGGYPGPQGPYY CAAGADKSYGRDIVDAHYKACLFAGINISGINAEVMPGQWEFQIGPVVGVSAGDHVWV ARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRSNGGYEVIKKAIKKLG MRHREHIAAYGDGNERRLTGRHETADINNFVWGVANRGASVRVGRDTEKDGKGYFEDR RPASNMDPYLVTAMIAETTILWEPSHGHGHGQSNGK</aaseq>

Gene Sequence

<dnaseqindica>3509..3636#3348..3408#2622..2781#2480..2517#2323..2376#2081..2155#1845..1973#1458..1545#1271..1377#1122..1170#931..1034#762..801#121..200#attgatagcctgtgcgtctccaagaagaggcttgccgctgccgccattggagccctctcgtttctgctcgagctctgcatttcttcagtaggaggaggaggaggaagagttggagtcgccatgtcgtcgtccctgctcactgacctcgttaacctcgacctgtcggagagcacggacaaggtcatcgccgagtacatatggtgagtgaagctcctgcttgtttctgtcttctttcttcttcttcatggctgctgcactgcatagcatatctgatggttcttggaggtgagagagatcttttgttgttaagtgttaagcttaatttgggttttcttcggttcttccttcctctgggttaggtggcaggttggttcttgttgcatgttagttactgctgtttttatgtgccgatgtttattggttgaaaaaaactgcccttattttttttttttttttgtgattgcctttcaggtatttcactgacgccctttgatttttttttattaggcgtgtttatttgtgagtaagttgtttaaagagatcatgaactgcatgtttctacaggttcttgatttgattataggattcatctaattctgaatcatcatcaattccttttcatggttgttctcctagtctccttatcccagaatgccggatctttacttagtattttacatttaaaagaggttaatcacgtaagcatgttgtttatacttaccaatctgctcctaatcacaccatgtgttcccataattcagggttggtggtactgggatggatgtgaggagcaaagccagagtacaaacactctctttacaccctgatatatatatcctttaatccttctcttgatatctgaaaacttggagcaatgacccagtaattacctgaaagttgttgtgacttgtgattactgcctctgatcagacgttgtctggacctgttgatgacccaagcaagcttccaaagtggaactttgatggctccagcaccggtcaggctaccggtgacgacagtgaagtcatcctccagtatgcttcttgtttgtactctttgatttgattacaccttggtgtgtgtgcattacactgatgtacctttcacatttttgtgacaagccctcaagccatcttcagagacccattcaggaaggggaagaacatcctggtagaagaattttttcccctcttttctgattcatagttacaaaaagcttctggcatgaatttttgttcatgattcctttttaaccatgctgtaaatgtaggtcatgtgtgactgttatgcgccgaatggcgagccgattccgacgaacaaccggtacaatgcagcaaggatcttcagtcatcctgatgtcaaggctgaagagccatggtcagtatatatctttgttattcagagatgtaatcctgatgtcaaatggaacttatgttggttgccaaatcaaaaatcaggtatgggattgagcaggagtacacccttcttcagaagcacatcaactggcctcttggctggccactaggtggctatccaggccctcaggtaattctgaacttcttatacactttcagtattgcatctcaaccacaacaaatttcttctcttgttttttcaaactagagaaatttatcagttattattgtcctttttatgttaaaataccagttgttacctaaatcattaacaaggaagagaagaattacatttacatactgaattttattcatttcacttgctgataacctgaccagcaatgtttgctagtcaatttttttaaaaacataatggaaatggtttacatcttcggcactgaatcttgaacaacgaaaatggtgtgatagggtccgtactactgtgcggcgggagccgataaatcgtacgggcgcgacatcgttgatgcccactacaaggcctgcctgtttgccggcatcaacatcagcgggatcaacgcagaagtcatgccggggcaggtagaacacatttctgaattctgcacacctcgcgtttctgtgccatttttttcccgacactttgtccatgagctgatcatgcgtttgatgtgcgattttgtgagcagtgggagttccagattggccctgtcgttggcgtctccgcaggggatcatgtctgggtggcacgctacattcttgaggtagactgaaaaaacaaacgtacaaaatctgaacacatggatttcgctggaaaattttgattccatcatctttttttttacattttttaacctttggaatcctgcaaaattcttgcattggttttttttttttgggctgataagacatgctcttctttggattacagaggatcactgagattgctggcgtcgtcgtgtccttcgaccccaagcccattccggtgaacacacacatttcaccaaacattttcaatctgatctgctcactgattctcattgcacataaacatgtcatctctgaatctgtatgaacatacgctgcagggagactggaatggcgccggtgctcacaccaactacaggtaagcaagaaatcatcttcaaatcctgcaaaataagataaaaaatcacctgcatttctgcaaaatcccgtgctgcaatgtgagtatgtgacctgcggttgcagcaccaagtcgatgaggagcaatggcggctacgaggtgatcaagaaagcgatcaagaagcttggcatgcgccaccgtgagcacatcgccgcctacggcgacggcaacgagcgccgcctcaccggccgccacgagaccgccgacatcaacaacttcgtctgggtaggacaagatcgctcgtcacactcatctctagtgaaaaattttagtcttaataggtaccaaaaaaaaaaaattgagccccactacgttactctctacagttagtagaaaataatctgaactattaatctcatttgatcgaagggtttagatctatttgtactacaaccctaattagcggtagtaaaaatatggagggacattattataaaaaaaagacgcggagaggtatataatcgtcatttagcagtgattaaatctttttcctttatttttttgtttttttgatggaatatgaataatactagcgtaatggatggccacatatcgatcttgccgggaaaaaaataaataataaagttatccctaattactatattatgtactagcgtaatagacaaccacatatcgatctagccggaaaaaaaataaatgataaagttatctctaattattatattatggtatctcttcaaagatggtaaaataactcaatttatagtactctgcttctgctcctcctttgcttaactccggcgacgtttttcttgcttcgtttcatccagggcgtagcgaaccgcggcgcgtcggtgcgtgtcggccgggacaccgagaaggacggcaaaggtaaaggaggcgtcgccattgatcgatgggagaaatttctgctgcttatttttgatgttcgcgtgttgattttcggttttggtttggtttgtttcgtcaggttacttcgaggacaggaggccggcgtccaacatggacccgtacctggtgaccgccatgatcgccgagaccaccatcctctgggagcccagccacggccacggccacggccaatccaacggcaagtgaggaggagtcgcctcgcccgggttgatgaactgctttctcgcgttctgggtttcatggaaatctgtgtgtgtgtgttctctgacgctggtgctgttagaaacttccaataattcagaaataactgcgatgtgctctcaaatttctcatgaggccatcacctgcagcatctcatgaaatagatctattgcaatgacaataccaatggcaacgcaaaattttatggtacctccagataccatctactctcctcaataatgacaat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0712800, RefSeq:Os03g0712800