Os03g0717900

From RiceWiki
Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0717900| Description = Similar to ABRH7 (Fragment)| Version = NM_001057619.1 GI:115454966 GeneID:4333917| Length = 2564 bp| Definition = O...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0717900

Description

Similar to ABRH7 (Fragment)

Version

NM_001057619.1 GI:115454966 GeneID:4333917

Length

2564 bp

Definition

Oryza sativa Japonica Group Os03g0717900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29825420..29827983

Sequence Coding Region

29825469..29825726,29826004..29826296,29826875..29827691

Expression

GEO Profiles:Os03g0717900

Genome Context

<gbrowseImage1> name=NC_008396:29825420..29827983 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29825420..29827983 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatcagagacctcgattgcccaacccaaccaaccaaccaccgccgcggcagcagaaggatccccaatttccgcgaaaaaccctcgaattcgacccggcatcccggcgcgtcggttgttccccgatggaggcagcagcagcagccgccgcggcgctcttgtcgccgcccgccgccgccgcgccctcgcggcggcctgggactcccggtgctacctcgctccccttcgcccggaggcgcggtgtcgccgccgtcaagggtcttggacggcagcagctcacctgcagaaggcgaggcgtcgtcgtgagggcggcgtcgtggtcgccgtcggggccggagtcgctgccgccgccgccgtcgtcgtcgatcgcgccgctccagatggagtcgccggtggggcagttcctctcgcagatcctggccacgcacccgcacctgcttcccgccgccgccgagcagcagctcgagcagctccagaccgaccgcgacgccgccaaggacaacggcggcgacaagcccgcgccgtcggacggcgacatcgtgctgtacaggcggattgctgaggtcaaggaaaaggagcgcaagagggctttggaggagatactctatgcacttgttgtccagaagtttgttgaagctggtgtttctttggttccagctctttcccactctatcagttcttctggaagagttgatcagtgggcagaatctgtggaagggaaacttgagaagatgcattcacaggaggcatatgaaatgatcgagaaccacctcgctctcatcctggggcagcggcaagctgatgccactgttgcggccataagtaaactccgagttggtcaggtgtatgctgcttctgtgatgtatggttacttccttaagagagtcgatcagagatttcagctcgagaagtcaatgaagaccctcccttggggatcagaagaggaagacaagctcaaccaagttatgacaacggactcaaggccctcaccccagacttctacttcacatccagagatggcatcatggacttcccctaacttcagtgcaggcggacctagccaatctgttaagccatgccgtcttagatcgtatgtcatgtcatttgattcagagaccctacaaagttacgcaacaatcaggtccaaggaggcatttggcatcatcgagaagcacactgaggcactatttggtaaaccagagattgtaatcacacctgaaggcacagtcgattcttccaaggatgaacatgtcaggataagtttcgcagggttgagaaggctgatcttagaggctgttacttttggatccttcctttgggatgttgagagctttgtggacaccaggtaccattttgtggccaactag</cdnaseq>

Protein Sequence

<aaseq>MHQRPRLPNPTNQPPPRQQKDPQFPRKTLEFDPASRRVGCSPME AAAAAAAALLSPPAAAAPSRRPGTPGATSLPFARRRGVAAVKGLGRQQLTCRRRGVVV RAASWSPSGPESLPPPPSSSIAPLQMESPVGQFLSQILATHPHLLPAAAEQQLEQLQT DRDAAKDNGGDKPAPSDGDIVLYRRIAEVKEKERKRALEEILYALVVQKFVEAGVSLV PALSHSISSSGRVDQWAESVEGKLEKMHSQEAYEMIENHLALILGQRQADATVAAISK LRVGQVYAASVMYGYFLKRVDQRFQLEKSMKTLPWGSEEEDKLNQVMTTDSRPSPQTS TSHPEMASWTSPNFSAGGPSQSVKPCRLRSYVMSFDSETLQSYATIRSKEAFGIIEKH TEALFGKPEIVITPEGTVDSSKDEHVRISFAGLRRLILEAVTFGSFLWDVESFVDTRY HFVAN</aaseq>

Gene Sequence

<dnaseqindica>50..307#585..877#1456..2272#acttgggccagtctgaccgccgcgagcgagcgcggcggcttcgctatatatgcatcagagacctcgattgcccaacccaaccaaccaaccaccgccgcggcagcagaaggatccccaatttccgcgaaaaaccctcgaattcgacccggcatcccggcgcgtcggttgttccccgatggaggcagcagcagcagccgccgcggcgctcttgtcgccgcccgccgccgccgcgccctcgcggcggcctgggactcccggtgctacctcgctccccttcgcccggaggcgcggtgtcgccgccgtcaaggtaaggagtgaatcccggtgaggtgtggcgctgtgtgggtagtggtttgtggttaattgctttgggttcttggtggcgacgaattcttgtgcgctgttctagttgagaaatcagatcttgatgtgttgggttgttgactcgatttctttttttttctttttttttgccgtgttttgtggagttcaattctggggggtgtttgaaggcagaaatggattgatttcttgacatgggttgctcgtttttggatatgtttgacatggattgatttcttcagggtcttggacggcagcagctcacctgcagaaggcgaggcgtcgtcgtgagggcggcgtcgtggtcgccgtcggggccggagtcgctgccgccgccgccgtcgtcgtcgatcgcgccgctccagatggagtcgccggtggggcagttcctctcgcagatcctggccacgcacccgcacctgcttcccgccgccgccgagcagcagctcgagcagctccagaccgaccgcgacgccgccaaggacaacggcggcgacaagcccgcgccgtcggacggcgacatcgtgctgtacaggtatacacttctttcttttgtttgtttgtttgttcctttgcaatggtggcttccttgtcatttcctgtaggtctagccgtaatcaagataagatttggtaaaattgattattctaagctatccccttgcatattaagtgcccgagttatacagactgttacatagtaattgtacaactatcaagctgtctaggccagccgatatgctgcctccagcagtgataaatattgtagctcatggacacttaacggtgtgtttaaacataagcaggtttaaatagcatataaagaattaagaacatagattgagggttaaactgtactggctttttttattaggatggagctatcaaagtccatatactgcagtttaaaattgctttcggagtaacaatattcctagttttcatggttggagtttactgggttcatttcaaaaggaaaaggagggcttgagttagataggaaatctgagctttgtcatagtgcgacgggactgtgagagttatatctcaagttgttcttataatatcctgcaattttggctaaaatttcccccttttcttttctggaatataggcggattgctgaggtcaaggaaaaggagcgcaagagggctttggaggagatactctatgcacttgttgtccagaagtttgttgaagctggtgtttctttggttccagctctttcccactctatcagttcttctggaagagttgatcagtgggcagaatctgtggaagggaaacttgagaagatgcattcacaggaggcatatgaaatgatcgagaaccacctcgctctcatcctggggcagcggcaagctgatgccactgttgcggccataagtaaactccgagttggtcaggtgtatgctgcttctgtgatgtatggttacttccttaagagagtcgatcagagatttcagctcgagaagtcaatgaagaccctcccttggggatcagaagaggaagacaagctcaaccaagttatgacaacggactcaaggccctcaccccagacttctacttcacatccagagatggcatcatggacttcccctaacttcagtgcaggcggacctagccaatctgttaagccatgccgtcttagatcgtatgtcatgtcatttgattcagagaccctacaaagttacgcaacaatcaggtccaaggaggcatttggcatcatcgagaagcacactgaggcactatttggtaaaccagagattgtaatcacacctgaaggcacagtcgattcttccaaggatgaacatgtcaggataagtttcgcagggttgagaaggctgatcttagaggctgttacttttggatccttcctttgggatgttgagagctttgtggacaccaggtaccattttgtggccaactagttgatcctacaaagtttcatcccagatagtggagattagtgtgtatatttggtccgaagtgtatgggtttcaatgaagactctttgcaaaacgaatttctcctggctctatgcagatcgcagagatctatgatttttacacagttttcgggcatatagcttcaatgtaaaatggatatttttttagcctaatgtgcagctgttagttcctggtaacacttgggctgcttgggccttgggtgatgtataatgttttatgacttgatgtctggaaattgaatgaggaatcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0717900, RefSeq:Os03g0717900