Os03g0727000

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Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0727000| Description = Similar to Homeobox protein OSH1| Version = NM_001057674.1 GI:115455076 GeneID:4333973| Length = 9519 bp| Definitio...")
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Gene Name

Os03g0727000

Description

Similar to Homeobox protein OSH1

Version

NM_001057674.1 GI:115455076 GeneID:4333973

Length

9519 bp

Definition

Oryza sativa Japonica Group Os03g0727000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30358195..30367713

Sequence Coding Region

30358559..30358765,30359844..30360076,30366757..30366901,30366987..30366989

Expression

GEO Profiles:Os03g0727000

Genome Context

<gbrowseImage1> name=NC_008396:30358195..30367713 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30358195..30367713 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgtaccacgagatgctggtgaagtacagggaggagctgacgaggccgctgcaggaggccatggagttcttgaggagggtggagacgcagctcaacacgctctccatctccggcagatcgcttcgcaatatcctttcctccggctcttctgaggaggaccaagaaggtagcggaggagagacagagctacctgagattgatgcacatggtgtggatcaggagctcaagcaccatttgctgaagaagtacagtggatacctgagctccctgaagcaagaactgtcaaagaagaagaaaaaagggaagctccccaaggatgctcgtcaacagctcctcaactggtgggagctgcactacaaatggccttacccctcggagagtcagaaggtggcactggcggagtcgacggggctggacctgaagcagatcaacaactggttcatcaaccagaggaagcggcactggaagccctccgacgagatgcagttcgtgatgatggacggctaccacccgaccaacgccgccgccttctacatggacggccacttcatcaacgacggcggcctctacaggctcggctag</cdnaseq>

Protein Sequence

<aaseq>MEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLR NILSSGSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKK GKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPS DEMQFVMMDGYHPTNAAAFYMDGHFINDGGLYRLG</aaseq>

Gene Sequence

<dnaseqindica>8949..9155#7638..7870#813..957#725..727#aggagagctcgatcgctgcaccaatacttcactggagatcgcctagctgcagctagctagcttatcctgcgtgtcttgagcttctctcatggaggagatctcccaccacttcggggtcgtcggagccagcggcgtccatggcggccaccagcatcagcatcaccaccacccgtggggttcttccctgagcgccatcgtcgcgccgccgccgccgccgcagctgcagcagcagcagacgcaggccggcggcatggcgcacacgccgctcacgctgaacacggcggcggcggcggtcggcaacccggtgctgcagctggcgaacggcagcctgctcgacgcgtgcggcaaggcgaaggaggcgtcggcgtcggcgtcgtacgccgccgacgtggaggccatcaaggccaagatcatctcccacccccactactcctccctcctcgccgcctacctcgactgccagaaggcaagtcccacacacatgtggtagcctagctagctacctccatgcatgcatgctctcgccgccgcgcgcatctcctacatgatctcatgtcaagctcgctctcagcttacatagcgtatgtgtcgtggtgggttgcaggttggggcgccgccggaggtggcggcgaggctgacggcggtggcgcaggacctggagcttcgccagcgcacggcgctcggcgtcctcggcgccgccacggagccggagctggaccagttcatggtgagctcgcaatctctcactctctttgttgctcgccttcctcttcgatatcttgagctcgctcgccggcggcgtgcgtgtgcaggaggcgtaccacgagatgctggtgaagtacagggaggagctgacgaggccgctgcaggaggccatggagttcttgaggagggtggagacgcagctcaacacgctctccatctccggcagatcgcttcgcaatatcctttcctccggtaacacaacacatccatccatccttccatcttcttctatccatgtactaatccattgcatgtcatcttcttcgatcgatctgctggtttatatcacggtttcatcggctttgttcttgctgtcccttttgtccatttgattcgatctatttgctggtttgctgacggtttgatttggtctatttcttgcatctaccatgtgtgatttctgggccaggaaaaacgcatctgtgtgttcatgtcttttttttcctcgtacatgcatgcgtgtcagtgaaccctgcagatgatctggtctgctggctcggtgtttggtgctctaaatcccgcaagttctcatcagggtttccaaaagattcttttcccctgattgcttttcttggccatgcatgtgggattcttccatctgggcttctaccgctgatcatttcttctgttgggaaggaatagtagtcaccggcacatgtgcatctcagtgttcagtgcagctactagcacactgacgattttgtggtctggctcttcagatatctcctgatgtttttgctatatttaaaatcgataccctgattagaaaaagattaagctaaagagtttaagtacatttcgcaaaacctggggattcgggacattcgtaacattatctggggtagtgctaaacatttttgccccaaatcttaagtttcttgaaataaactgcagaaccttggggtttttacattatagatatcccaatacctagggttttcggaaattaataaatctactgtaagctaaatcattctaaaatcatagtacatcttcatctccatcttcatcttgaggaataatatgtccctaatatcattgaggttctcccttgggttctcttggcgtttatgcaactcttttatttttttttagataatggaaaattttatatactatgcctctcatgccggcagctggttgagtttcgattccctttctgaaagaacatgtgcatgtgactctcccgagtagagagaagaagttctttggctcagccacatcttttccccgggatggaaacaaaggcggtggtgatgagaggagtccgtccttaccatgttcttcttctagggttttgggggtaaaggctttagctcactgtgcaagcaaacagtgcgtagccgaggagtctcactgccgtatgtcagtggagcaaggacacacatgttgtgtgttttactgatccctctgcacaaacatctcacatagagagagagagagagagagagagagatgtacatgttcagagatgcatcccccatctgtcacgcaaggccagaacaatattcttgtcatctttcactccccctggagaaacgaagtggctacctgttgtcctagaatctctcttctcttggttatgtgaggtggtgttgttgctgtggtcttccagattgttgtgtggatacacagtgcctgcctgtgttcttgtggtgttcttcttttagtctttgctaaattttaaaatgtagacatcaggtggttccagataggccttctctaatgacctgtcacgagagcatagtaagtagcagtaccagcacacagttgacactctcactgtgcagggtttttcgctcatcaggagctgtatccatgcatgcacaggtgctgctactactatgccacacaatcacttcattattggagcatgtagtagggtagaagctgccatctcatgtgtgttgcatgcacagaagcaggatatcaatagtgaattcagatgcatatgtgtagaaattgattaaaaccctgaacaagtttgttgaaataggaaacctgaacaggtagtgaggtcagtcttgtgtagaaatccaatggtcagatagatgtattcctacacactctactatatacgtagtaggtagacagatgagtaaatgggatagtatactatacagtaggtcagtcttgtgtagaaatccaatgtacagcagtatactccatgacttggtattctgtgttttctgaccagtgaagtcgcatggacagaacggtcagagctagcctcgagaaagatacagttaagcaagagcatagcctattatttgatgtgagatctccttgcaatattttgggtgatctccttggctatactagtagtaccagtattatatactccactatagagtactactcgtgtattttttgccagtcttcttctagttctcttcattctctctcatagatgtaatggcggtcaagaaacattggatgctttccaaggctagtccgagttcaaatgcgtctgtatttttcagctgtcaactcatttcttctcaggttcaattgttctttgtcctactacttggacctaggtagacgcacatctactctatatgcgttctcttttccaaaaaatatgactggcttacctgattcacgaggcaacctgaatatcacccggtcaaggttgcaggtgatcattcctaattgtgtttaggaccatagcttgattttaatcacaaaacaacactgcatttttctgactgatgttgcacctgatgtactccaagattcttcgttgcatgcattctttcaaggccatgcaaaagcaggggacacagatatcacgagtttccgtttgtctcgaggcaacaccaaaagagatactgaaactttgcttgctaaaaagcaaacaaaagaaaacaatgggatggaaaagagctgactgattttgcaatggaacgtacgtcactagaaaagacaatgcatgcaactggaggacagtagtatgactcgacaaattgagttaacaaaaattttttggatgataattgttcccctcatgtctttttgtgattgccaaatcgatagtgttggttcttccatttctaaattccggagtttctgtgtctggcattcctttttcttgatgtgtcagacatcttctgtacatttagtctgaggttctgctgggtaatgaaggtcctcttcgtttgcttctgctcttaattttattagctgtagtttttggttaatgcaagttaaaacaaaaatatctctttaattaacttagttcttcaaaattgagtcttaaaaatcctacaaatattgcaacttgcatgatgcattccatcaatattttgtttgcatgcgagtgcagctcctagaacactctcttgcttttctttttccttttttaatgtaaagctgctatattcaataatatatattttcatctatttagtgaacacaaaggaactatttaggcagtgattcggctacctctcccagttgattgttctgttttttccttggcattattttcgcatagatactaatgtttcttatttatttatgaaaaattaagttgcgcattatttttatacatgattcatgttatattgaccaaataaagtcttatagaagtgcaatattttgtgctacacaatacaagatgtgctgtggtagaatttacccatgactcatattgtcatttttgaaaattttcccgtgggttacatgaaataattgtcttgctcctgtgaatatttggatgtgtctgacctttttatagatgttttacagggagtccgaccaagaatgcctgagtcaaaattagcttctgtattatctttccctgtttttcttcattttgcagagtaaaccaatgttctctgctccttacataagcagtaattcttcacaagttgggaacaaatgtggggaaaatcgtctaacccttcatttattgatccttgtttcccccctaatgtggccttatgttttagaacttcatgcaagtaaccgatatgcatgattacatgaatatgctagcaccatcatccatgagttgcaattgatcataactaaatatatattaaatatttaaaacatgaattttttaaataaatgataaataattgtgctgaaatgttgaacatacacaagtatgctactagtatattgttttaaagcaaatcgttacaaaaaaaagacacacatacctccaaatttacggctgcaaaagttccagtgtaaggatgggtgtagaacctggcttcgccctgcacttcttttaaagagcaagatgagatgatgaagcaatgccgcaagttcaaaagctgtttgacaagtacaaataattcttctttatattctgtagaaatgcacaaatacaaaattatggatgttgtaccaggcctttgtatcctacatttaactagaaacacatcttttcttagataggagaggttttgtggctttgaaaaatactcgtagggtagagaatttaacatacaggtggcaattgaacaaccattgtgtccaaagcgaagttatcttcttctcatttctaggatatcagctgattttcagtagtcttgtatgtacgaattaatctagcgtagtagaggagagaatacccggttcacccaagctacaaaaacaattaaaaagttgtgaattttcacagcaaaattgataccatagaatcagactccacaaaatttcaaatgaacagactacttatataagatattaaccattaagataaacagtttactggtgagatattgacttgctacacataaaaagaaaaaaaaactagcaccacagattatccaatgcaccaatttagccaatttatggcatcagtaactacgtgcatacactctaaataaacgaccttttacagtatttagcgctacatttagcattgttctttgcatgtagtaaataaattaaaagtactaaattattttcctgacaactctactgaaactgttttgagtgcaatcaatctatatattttgccttggaataaaatttaataggcctgtcgacctagatatcgctaggacctgtattatccttgcataattagttgatatttactccacaggaagaaaaaaatgttattccttactaaagctaagtaaacttgtcgtagaactatcgtagtactcatcacactcttatcccaatcaggactgtttacatcagagaaactatctcatctttgcactaaaagagcgcaaagggttaactacactttgacagttgtaattatttaatccaagacattatttaagagatttatatactgcatttcttgtacctaatatgcctgataattcactaaaacagaattagtcctcttatggttatttgtagggttcatttctcatgcagtgctctgttatccttgaacatggttattattttgtttaattaattttataccccctctgttttaaattagttgttgttctaggtttgtcctaagtcaaacatttttatctttgaccatcaattttttttttagaaattcttgtagtttaagagcatgcgaattatatatgttgagaaaatattttcttatggtgaatccgaaaacataattctaatgatgttaaaccatatgaatttctagaaaataatagtcaaaagataaaaatgtttgacttaggacaacaaagctagaaaaagtgatttgaaatggagggagtaattcttttcagatgctactcctttggtcataaatatttgatgtttaggacaagatttggtctaaacttttaaaattccgacaatgaattttatattggaataacttaatcaaatctaatacatttatggtattataactttacttttggaggtaaatctacaaaaagcatttcttttgttttgaatataagcatttgagaaattgttgatggttgaaatttcaagagtttgaagaaatcttgcgcttgcaaatggttttgatcagaggaagtaattgaatggttctttttctgaaaaaaaaaattctaacgatgaaagataagcatattcaactggtcatagtcttaccattttatttcgttgtgtcagaatgtttttaagatctagctattgaatactccctttgtccctaaatataagggattttggttggatgtgacgcacatccaaccaaaatcccttatatttagggacggagggagtagataatggctagacaaggatgtgttgagaatattgtgtgcttgctttgtacgctgttttacaaacactaacttattatggatgggttttcttaacactactcctgtacaataagtttttttttcttttttcccctcgagagaatgaggaaagatacttaccatttatgtgaggaaaagtttacaagttactatcacctgacattttacaccagcggataaattctattataagagtctccttaaaatgggacaccttcttcttctttatataaaatgtaggcaacggcatgactgttcaaaaaaaaaacttctattctaagagcaagtactgtgttgccagtatcttcattttcgtagaccatcatctgattttgttaagcacagtgttcttatgtatattttctgctgcaacttaaattctctcgtttgaattcatagcaaaataggttgcctgttttgtcgatttcgataggtacagcgccagctacatatattgtaaagctaatatgtagtttacatgttattctcgtccacccttgtaatcaaatatttatcgtttatctgactgcattctttggtctacttaatttaatttgaataactactgaagagatctacacgtttttcctgatttcttttgaattagtctacctatgtgaaccataatcaatttcttgtctttgctaactatttcgtgtgacatgtttgaaggctcttctgaggaggaccaagaaggtagcggaggagagacagagctacctgagattgatgcacatggtgtggatcaggagctcaagcaccatttgctgaagaagtacagtggatacctgagctccctgaagcaagaactgtcaaagaagaagaaaaaagggaagctccccaaggatgctcgtcaacagctcctcaactggtgggagctgcactacaaatggccttacccctcggtaagattcatcatcttcttaattttccatattgatcttatgatctatatgactagggatgctgaacattaaatataagttacttctagttttggtacaggcgtacagcacagccaacacctgtgatgtttgcactgtagattcaggtcagatactcagatgtaggcgcatatagttagttggtgcatcatccatccctttgaaatctatcgttatgtaattactgaagctaaagtaaaccatcctgagaatcggaacatatgttgcatgacatacgcatgtttggtgtattcaaatatttgtagattctatgctatatatatatttgcaagctatgaccacctatttggaatgatttttgaaaatttctatagctagattggaagtcagtcatggtaggcttctggtcaaccaagccattagttcttggacatgatttttattaattatttgtttttggtgcgctgtagtcattagcatcaaggtttgcatcgaaactagcaggatattccttcaaaaaaaaactagaaggataagtaactctgtattttacccaggctatatatatcaaacttttgctcttgtattttcttatcattttccccctaaaaccgtcctaattttgtagaggcatcgaacgcaccaaacagtactctttctgtttatctagcatttctgtgctatttttttttcttttttgctgggatgaccgaagaaaggtcatctaaatgttattaaaatagaaggaaaaaatggttacaagaaagtttttcattgacagactatgacattattatgcaatgccaacaaactattgcaagctatatcaccatgcagcttttctattactcccaccgttccaaaatacgagaatctaggtacgaatagggcacgttctggtttacgaatctggataagtcgtagtaatacgatgtgtttcatccttgtcctaagttcttatattgacggaggtagtgctagttatctactaccatttctgtgctataaaatataatgcaagctatcgccatgcagatttcctgatcatggttatgtatctattttacatgtggagcaggagagtcagaaggtggcactggcggagtcgacggggctggacctgaagcagatcaacaactggttcatcaaccagaggaagcggcactggaagccctccgacgagatgcagttcgtgatgatggacggctaccacccgaccaacgccgccgccttctacatggacggccacttcatcaacgacggcggcctctacaggctcggctagctagctagcctactccttatccccagctaccatgacctagatcgatctcgaccccaaatcaatggtcgctaagctactgaaaagtttgtgatgagaattgaagaacctaggttagtcttcctggtaatttgatgctcgcgcgtacgcacgccatggatggctgcgtgcttattttgtttcttgccgcaatatgtaatgcaattgccttagctaatgcatcaactcgggtcggttttagctgctgctgctgcgccacaatgaggtggttgtggttatgcttttgtgtggtttaatacgccaagacgtacacattgcttcgaaatgtcgctactcttgctgctgctaattaagtgcgtgtttgaat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0727000, RefSeq:Os03g0727000