Os03g0729000

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Revision as of 12:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0729000| Description = Conserved hypothetical protein| Version = NM_001057686.1 GI:115455100 GeneID:4333985| Length = 2318 bp| Definition ...")
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Gene Name

Os03g0729000

Description

Conserved hypothetical protein

Version

NM_001057686.1 GI:115455100 GeneID:4333985

Length

2318 bp

Definition

Oryza sativa Japonica Group Os03g0729000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30547854..30550171

Sequence Coding Region

30548005..30548757,30548843..30549067,30549209..30549406,30549518..30550102

Expression

GEO Profiles:Os03g0729000

Genome Context

<gbrowseImage1> name=NC_008396:30547854..30550171 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30547854..30550171 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcctccctcgtcacctctctcttgttcagcagtagcagcagcagtaacactgcaactagtacaagctcaagaagaagcttcagtcttttctccaagaaccagtactgcaagcctaggcctctcaggcgaagcagtagccgcctcctcgtcaggtgctccttgcaacagcagcaggaggagaaggcggcgccggcggcggagtcgcaccacgccggcggcggacaggacgacgccgccacggcgtcgcaccacgccgtggaaggagagaacggtgtcgcagacgccgacggcggcggcgtgaagaagagcaaggaggagttggaggaggaggagcagcaggaggtggactggaggtcggacgaggagttcaagaggttcatggggaacccgtccatcgaggccgccatcaagctggagaagaagcgcgccgaccggaagctccgcgagctcgaccgcgagcccgacgccaacccgctcgccggcctcctccgcggcctcgctaggggccagctcgcccgcgagaaggagaggctcgagctcgccgagaacaccttcaaggcgcttgacctcaacaagctcaagagctgcttcggctacgacacgttcttcgccgtggacgtccggaggttcggcgacggcggcatcttcatcggcaacctgaggaagcccgtggaggaggtgaggccgaagctggagaagaagatcgccgaggcggccggcacagacgtcaccctctggttcatggaggagaagaacgacgacatcacaaaacaggtctgcatggtccagccgaaggcagagatcgacctgcagctggagatcaccaagctgagcacgccgtggggatacctgagcgccgtggcgctggccgtcacgacgttcgggacgatcgccatcatgagcggcttcttcctcaagcccggcgcgacgttcgacgactacgtctccgacgtgctccctctcttcgccggcttcctctccatcctcggcgtatccgagatcgcgacgaggctgacggcggcgaggtacggcgtgaagctgagcccgtctttcctggtgccgtccaactggacggggtgcctcggcgtgatgaacaactacgagtcgctgctgccgaacaagaaggccctgttcgacatcccggtggcgcgcgcggcgagcgcgtacctcacctcggtggcgctcgccgtctccgcgttcgtctccgacggcagcctgaacggcggcaagaacgcgctgttcgtccggccggagttcttctacaacaacccgctgctgtcgttcgtgcaggcggtgatcgggccgtacgccgacgagctcgggaacgtgctgccgaacgcggtggagggcgtcggcgtgccggtggacccgctggcgttcgcggggctgctcgggatcgtggtgacgtcgctgaacctgctgccgtgcgggaggctggagggcgggcggatcgcgcaggcgctgttcgggcgcggcgcggcggcggtgctgtcgttcgcgacgtcggtggcgctcggcgcgggcgccatcatcggcgggagcgtgctgtgcctggcgtgggggctgttcgcgacgttcgtccgcggcggcgaggagatcccggcgcaggacgagatcacgccgctggggagcgagcgctacgcgtgggggctcgtgctcgccgtcgtctgcctcctcacgctcttccccaacggcggcggcacctactccagcgacttcctcggcgcgccattcttccgcggcggcatctaa</cdnaseq>

Protein Sequence

<aaseq>MASSSLVTSLLFSSSSSSNTATSTSSRRSFSLFSKNQYCKPRPL RRSSSRLLVRCSLQQQQEEKAAPAAESHHAGGGQDDAATASHHAVEGENGVADADGGG VKKSKEELEEEEQQEVDWRSDEEFKRFMGNPSIEAAIKLEKKRADRKLRELDREPDAN PLAGLLRGLARGQLAREKERLELAENTFKALDLNKLKSCFGYDTFFAVDVRRFGDGGI FIGNLRKPVEEVRPKLEKKIAEAAGTDVTLWFMEEKNDDITKQVCMVQPKAEIDLQLE ITKLSTPWGYLSAVALAVTTFGTIAIMSGFFLKPGATFDDYVSDVLPLFAGFLSILGV SEIATRLTAARYGVKLSPSFLVPSNWTGCLGVMNNYESLLPNKKALFDIPVARAASAY LTSVALAVSAFVSDGSLNGGKNALFVRPEFFYNNPLLSFVQAVIGPYADELGNVLPNA VEGVGVPVDPLAFAGLLGIVVTSLNLLPCGRLEGGRIAQALFGRGAAAVLSFATSVAL GAGAIIGGSVLCLAWGLFATFVRGGEEIPAQDEITPLGSERYAWGLVLAVVCLLTLFP NGGGTYSSDFLGAPFFRGGI</aaseq>

Gene Sequence

<dnaseqindica>1415..2167#1105..1329#766..963#70..654#aagaaagaacagctagaacaatcacttgcaagcatacacacaccaagctagctagctcgatcgtcgccaatggcgtcgtcctccctcgtcacctctctcttgttcagcagtagcagcagcagtaacactgcaactagtacaagctcaagaagaagcttcagtcttttctccaagaaccagtactgcaagcctaggcctctcaggcgaagcagtagccgcctcctcgtcaggtgctccttgcaacagcagcaggaggagaaggcggcgccggcggcggagtcgcaccacgccggcggcggacaggacgacgccgccacggcgtcgcaccacgccgtggaaggagagaacggtgtcgcagacgccgacggcggcggcgtgaagaagagcaaggaggagttggaggaggaggagcagcaggaggtggactggaggtcggacgaggagttcaagaggttcatggggaacccgtccatcgaggccgccatcaagctggagaagaagcgcgccgaccggaagctccgcgagctcgaccgcgagcccgacgccaacccgctcgccggcctcctccgcggcctcgctaggggccagctcgcccgcgagaaggagaggctcgagctcgccgagaacaccttcaaggcgcttgacctcaacaaggtatatcaatggcgtcttgacgtacgtcttcggtcttcccaattgggctaagatgagtagatgagggaaaaaaatatatgatttgatcgtttggtcgattggtgtgtgcagctcaagagctgcttcggctacgacacgttcttcgccgtggacgtccggaggttcggcgacggcggcatcttcatcggcaacctgaggaagcccgtggaggaggtgaggccgaagctggagaagaagatcgccgaggcggccggcacagacgtcaccctctggttcatggaggagaagaacgacgacatcacaaaacaggtaccaacttataatcttgtggcataatgttatcgattgcatttgatcactcgtgattgatgttgttgtggctttgatttatggatcgtcgaaacttgaaagcaatttatcttggcgtgttcttgtgattggattgatcaggtctgcatggtccagccgaaggcagagatcgacctgcagctggagatcaccaagctgagcacgccgtggggatacctgagcgccgtggcgctggccgtcacgacgttcgggacgatcgccatcatgagcggcttcttcctcaagcccggcgcgacgttcgacgactacgtctccgacgtgctccctctcttcgccggcttcctctccatcctcggcgtatccgaggtaaagatctgccgctgagctctgctcacttatgctgctgatctcggcgtgttcttggaccaatccggccgatgatccatggcagatcgcgacgaggctgacggcggcgaggtacggcgtgaagctgagcccgtctttcctggtgccgtccaactggacggggtgcctcggcgtgatgaacaactacgagtcgctgctgccgaacaagaaggccctgttcgacatcccggtggcgcgcgcggcgagcgcgtacctcacctcggtggcgctcgccgtctccgcgttcgtctccgacggcagcctgaacggcggcaagaacgcgctgttcgtccggccggagttcttctacaacaacccgctgctgtcgttcgtgcaggcggtgatcgggccgtacgccgacgagctcgggaacgtgctgccgaacgcggtggagggcgtcggcgtgccggtggacccgctggcgttcgcggggctgctcgggatcgtggtgacgtcgctgaacctgctgccgtgcgggaggctggagggcgggcggatcgcgcaggcgctgttcgggcgcggcgcggcggcggtgctgtcgttcgcgacgtcggtggcgctcggcgcgggcgccatcatcggcgggagcgtgctgtgcctggcgtgggggctgttcgcgacgttcgtccgcggcggcgaggagatcccggcgcaggacgagatcacgccgctggggagcgagcgctacgcgtgggggctcgtgctcgccgtcgtctgcctcctcacgctcttccccaacggcggcggcacctactccagcgacttcctcggcgcgccattcttccgcggcggcatctaaggcgcccctcgaggcctcgatcgatctctccatccatggcggcgcgagtaggctttagtgggcgaacaagtagctagagggcgattactctgtttatgcttcgacgcgtatgtgtatataacaacataaatcatacgtattactagtactt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0729000, RefSeq:Os03g0729000