Os03g0749100

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Revision as of 12:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0749100| Description = Similar to Beta-glucanase| Version = NM_001057809.1 GI:115455346 GeneID:4334113| Length = 2489 bp| Definition = Ory...")
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Gene Name

Os03g0749100

Description

Similar to Beta-glucanase

Version

NM_001057809.1 GI:115455346 GeneID:4334113

Length

2489 bp

Definition

Oryza sativa Japonica Group Os03g0749100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31598806..31601294

Sequence Coding Region

31598860..31599115,31599204..31599499,31599594..31599986,31600052..31600544,31600618..31601114

Expression

GEO Profiles:Os03g0749100

Genome Context

<gbrowseImage1> name=NC_008396:31598806..31601294 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31598806..31601294 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtgctgcaccgacgacgatgtggcgttcgccggcggcgccggtgtgtctcctcgtcgccgccgttctcctgtcggcggtggcggcggcgacggcgggggaggagtacgtgaagtacaaggacccaaagaagccgatcggcgagcgcgtcgacgacctcctcagccggatgacgctcgcggagaagatcggccagatgtcgcagatcgagcgcgccaacgcgacctccgccgttatcgagaagtacttcgtcgggagcgtgctgagcggcggcgggagcgtgccgtcggagaaggcgacggcgaaggagtggcagcagatggtggccaagatgcagaaggcggcgctcaagacgcgcctcggcatcccgatcatctacggcatcgacgccgtgcacggccacaacaacgtccacaacgccaccatcttcccccacaacgtcggcctcggcgccacccgcgaccccaagctcgtcaagcggatcggccagtccaccgcccacgaggcccgcgccaccggcatcccctacaccttcgccccatgcgtcgccgtttgccgcgacccgagatggggacggtgctacgagagctacagcgaggacacgaagctggtgcagctgatgacgtcggcaatggtgcccgggctgcagggcgacgcgccggcgaggtaccccaaggggacgccgttcgtggcgggggggatgaacgtggccggctgcgccaagcacttcgtcggcgacggcgggacgcgggacggcatcaacgagaacaacacggtgctcagcttccacgacctgatgcgcatccacatgccgccctacgacgacgccgtcatcaagggcgtcgcctccgtcatgatctcctactccagctggaacggcgtcaagatgcatgagaaccgcttcctcatcaccgacatcctcaagaacaagttgaaattcaggggatttgtgatcacggactggcaagcggtggacaggatcacgacgccgccgcacaagcactactaccactcgatccaggagacgatccacgcgggcattgacatggtgatgatcccgtacgactacccggagttcgtcgccgacctgacgacgcaggtgtcgaacgggtcgatcaagctggacaggatcaacgacgccgtgagccgcatcctccgcgtcaagttcgccatgggcctcttcgagaacccgctcccggacccgcgcctcgccggcgagctcggcgacaaggagcaccggcagatcgcgcgcgaggccgtgcgcaggtcgctcgtcctgctcaagaacggcaagcacggggagaagcccgtgctgccgctgtccaagaaggccgacaagatcctcgtcgccggcagccacgcccacaacctcggcttccagtgcggcggctggaccgtgtcctggcaaggccagggcggcaacaacgtcaccgccgggacgacgatcctggaggcgatcaaggcggcggtggacgagagcacggtgatcgactacacggagcacccggacaagagctcgatcgccgagagcgccaaggagtacgactacgcggtggtggtggtgggggaggagccgtacgcggagacggagggggacaacctgaacctgaccatcccgtcgccggggccgaaggtgatcaaggacgtgtgcgggctcgtcaagtgcgtggtggtgctcgtctccgggcgtccgctcgtggtggagccgtacatcggcgccatggacgcgttcgtcgccgcctggctccccggcacggagggccacggcgtcgccgacgtgctgttcggggatcacggcttcaccggcaagctgccacgtacttggttcaaatcggtggaccagctgccgatgaatttcggcgacaagcattacaacccgctgttcccatttgggttcggactaaccaccaagccaagccatagccaaagttag</cdnaseq>

Protein Sequence

<aaseq>MRAAPTTMWRSPAAPVCLLVAAVLLSAVAAATAGEEYVKYKDPK KPIGERVDDLLSRMTLAEKIGQMSQIERANATSAVIEKYFVGSVLSGGGSVPSEKATA KEWQQMVAKMQKAALKTRLGIPIIYGIDAVHGHNNVHNATIFPHNVGLGATRDPKLVK RIGQSTAHEARATGIPYTFAPCVAVCRDPRWGRCYESYSEDTKLVQLMTSAMVPGLQG DAPARYPKGTPFVAGGMNVAGCAKHFVGDGGTRDGINENNTVLSFHDLMRIHMPPYDD AVIKGVASVMISYSSWNGVKMHENRFLITDILKNKLKFRGFVITDWQAVDRITTPPHK HYYHSIQETIHAGIDMVMIPYDYPEFVADLTTQVSNGSIKLDRINDAVSRILRVKFAM GLFENPLPDPRLAGELGDKEHRQIAREAVRRSLVLLKNGKHGEKPVLPLSKKADKILV AGSHAHNLGFQCGGWTVSWQGQGGNNVTAGTTILEAIKAAVDESTVIDYTEHPDKSSI AESAKEYDYAVVVVGEEPYAETEGDNLNLTIPSPGPKVIKDVCGLVKCVVVLVSGRPL VVEPYIGAMDAFVAAWLPGTEGHGVADVLFGDHGFTGKLPRTWFKSVDQLPMNFGDKH YNPLFPFGFGLTTKPSHSQS</aaseq>

Gene Sequence

<dnaseqindica>55..310#399..694#789..1181#1247..1739#1813..2309#aattagcatcacctccctccttgcttatcaacacgtacgttgcgtttcttggcaatgcgtgctgcaccgacgacgatgtggcgttcgccggcggcgccggtgtgtctcctcgtcgccgccgttctcctgtcggcggtggcggcggcgacggcgggggaggagtacgtgaagtacaaggacccaaagaagccgatcggcgagcgcgtcgacgacctcctcagccggatgacgctcgcggagaagatcggccagatgtcgcagatcgagcgcgccaacgcgacctccgccgttatcgagaagtacttcgtcggtaagcccctctcgccgccggccgccgccgccgtcgcgcgcgttcgatcgttgtacactgacattgtgttttgttttgtgtttgcaagggagcgtgctgagcggcggcgggagcgtgccgtcggagaaggcgacggcgaaggagtggcagcagatggtggccaagatgcagaaggcggcgctcaagacgcgcctcggcatcccgatcatctacggcatcgacgccgtgcacggccacaacaacgtccacaacgccaccatcttcccccacaacgtcggcctcggcgccacccgcgaccccaagctcgtcaagcggatcggccagtccaccgcccacgaggcccgcgccaccggcatcccctacaccttcgccccatgcgtcgccgtaagccgcccaaaccggacgaacacatcgttgccagtgaaaatttacgtaatgttcaaggtgttcgaccgatcgatcgcatgtgtgtgtgcaggtttgccgcgacccgagatggggacggtgctacgagagctacagcgaggacacgaagctggtgcagctgatgacgtcggcaatggtgcccgggctgcagggcgacgcgccggcgaggtaccccaaggggacgccgttcgtggcgggggggatgaacgtggccggctgcgccaagcacttcgtcggcgacggcgggacgcgggacggcatcaacgagaacaacacggtgctcagcttccacgacctgatgcgcatccacatgccgccctacgacgacgccgtcatcaagggcgtcgcctccgtcatgatctcctactccagctggaacggcgtcaagatgcatgagaaccgcttcctcatcaccgacatcctcaagaacaagttgaaattcagggtaaccaatgctaaaacctctcaaattctcctcaaaattcaactgaacttttaaaaaatgtgcagggatttgtgatcacggactggcaagcggtggacaggatcacgacgccgccgcacaagcactactaccactcgatccaggagacgatccacgcgggcattgacatggtgatgatcccgtacgactacccggagttcgtcgccgacctgacgacgcaggtgtcgaacgggtcgatcaagctggacaggatcaacgacgccgtgagccgcatcctccgcgtcaagttcgccatgggcctcttcgagaacccgctcccggacccgcgcctcgccggcgagctcggcgacaaggagcaccggcagatcgcgcgcgaggccgtgcgcaggtcgctcgtcctgctcaagaacggcaagcacggggagaagcccgtgctgccgctgtccaagaaggccgacaagatcctcgtcgccggcagccacgcccacaacctcggcttccagtgcggcggctggaccgtgtcctggcaaggccagggcggcaacaacgtcaccgccggtaaatcaagcacgattccgatctcgatcgacactcgccgtcgcgtttgccactaatgtgaatcgtgatgcagggacgacgatcctggaggcgatcaaggcggcggtggacgagagcacggtgatcgactacacggagcacccggacaagagctcgatcgccgagagcgccaaggagtacgactacgcggtggtggtggtgggggaggagccgtacgcggagacggagggggacaacctgaacctgaccatcccgtcgccggggccgaaggtgatcaaggacgtgtgcgggctcgtcaagtgcgtggtggtgctcgtctccgggcgtccgctcgtggtggagccgtacatcggcgccatggacgcgttcgtcgccgcctggctccccggcacggagggccacggcgtcgccgacgtgctgttcggggatcacggcttcaccggcaagctgccacgtacttggttcaaatcggtggaccagctgccgatgaatttcggcgacaagcattacaacccgctgttcccatttgggttcggactaaccaccaagccaagccatagccaaagttagaggtcaaaacattttatctcaatgtgtagccagagccggagttaggggttaaacattgcatctgatggactattatattgttcggttaaaagtaaaatgagtgtgagggtatggtattttaaaaataaatattagtaggattttattggtgagtgattctcgtaccattttttttctaca</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0749100, RefSeq:Os03g0749100