Os03g0749300

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Revision as of 12:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0749300| Description = Similar to Exoglucanase precursor| Version = NM_001057810.1 GI:115455348 GeneID:4334114| Length = 4285 bp| Definiti...")
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Gene Name

Os03g0749300

Description

Similar to Exoglucanase precursor

Version

NM_001057810.1 GI:115455348 GeneID:4334114

Length

4285 bp

Definition

Oryza sativa Japonica Group Os03g0749300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31616195..31620479

Sequence Coding Region

31617163..31617379,31617477..31617681,31617892..31617982,31618100..31618242,31618382..31618625
,31618732..31618836,31619181..31619363,31619451..31619655,31619748..31620232

Expression

GEO Profiles:Os03g0749300

Genome Context

<gbrowseImage1> name=NC_008396:31616195..31620479 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31616195..31620479 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagtttgcacaagttcagtgttattctcctcatgttatgttttgctacgttggggagcgctcagtatgtcaagtataaggatccgaagcagcccgtctctgttcgtgtcaaggatctgctcggccggatgactctcgctgagaagattggccagatgacccaaatcgagagggagaatgccacggcggagcagattgccaagtacttcataggtagtgtactgagtggtggaggcagtgtgcctgctcctcaggcatcagctcaggcttgggcttcaatggtgaatgaaatgcaaaagggtgccctttcgacccgactaggtattccgatgatctacggtattgatgccgtgcatgggcacaataacgtctacaaggctacaatcttcccccataatgtcgggctcggcgctaccagggaccccgacctagtaaagaggataggagaagcaactgctcttgaagttagagctactggaattccctacgtctttgctccttgcgttgcggtttgcagagacccaagatggggacgctgctacgaaagctatagcgaagacccaaaggttgtccagtcattgaccacactcatctctggcttgcaaggcgatgttccatcaaatgatgtaggaagaccatatgttggtggaagtaagaaagttgctgcatgcgcaaagcactatgttggtgatggtggaacggtcaagggaatcaacgagaacaatacaatcatcgatactcacgggctgttgaccattcacatgcctccttattataattctatcattagaggagtctccactgtcatggtttcatactctagctggaatggagtaaaaatgcacgcgaaccatcacctaatcactgattttctcaagaacaagctccgcttcaggggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataagaactattcttactcaatcgaggctggaattggtgccggcattgacatgatcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaacaaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagttcaccatgggtctatttgagagcccttttgctgactctagcctcgccgatgaacttggaaagcaagagcaccgtgagctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaagaacggaaaatcctcctactctccggtgcttcccctcccgaagaaagccggtaaaattctcgtcgcgggaagccatgctgatgatttgggcagacagtgtggaggatggaccatcacctggcaaggacagcccggcaacaacatcactgctggcacgacgatcctgtcggcgatcaaggccaccgttgatcccagcacgacggtggtgtactcggagaacccggacagcagcgtggtcaccggcgacaagtacgactacgcgatcgtggtggtcggcgagccgccgtacgcggaggggttcggcgacaacctgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgcaagagcatcaagtgcgtcgtggtgctcatctccgggcggccgctggtggtggagccgtacatcggcggcatcgacgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgttcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagctgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctcaccacgcaggcgcacagcagctga</cdnaseq>

Protein Sequence

<aaseq>MGSLHKFSVILLMLCFATLGSAQYVKYKDPKQPVSVRVKDLLGR MTLAEKIGQMTQIERENATAEQIAKYFIGSVLSGGGSVPAPQASAQAWASMVNEMQKG ALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPDLVKRIGEATALEVRAT GIPYVFAPCVAVCRDPRWGRCYESYSEDPKVVQSLTTLISGLQGDVPSNDVGRPYVGG SKKVAACAKHYVGDGGTVKGINENNTIIDTHGLLTIHMPPYYNSIIRGVSTVMVSYSS WNGVKMHANHHLITDFLKNKLRFRGFVISDWQGIDRITSPPHKNYSYSIEAGIGAGID MIMVPYTYTEFIDDLTEQVNNKIIPMSRIDDAVYRILRVKFTMGLFESPFADSSLADE LGKQEHRELAREAVRKSLVLLKNGKSSYSPVLPLPKKAGKILVAGSHADDLGRQCGGW TITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSSVVTGDKYDYAIVVVGEP PYAEGFGDNLNLTIPEPGPTVIQTVCKSIKCVVVLISGRPLVVEPYIGGIDAFVAAWL PGTEGQGVADVLFGDYGFTGKLSRTWFKSVDQLPMNVGDAHYDPLFPFGYGLTTQAHS S</aaseq>

Gene Sequence

<dnaseqindica>969..1185#1283..1487#1698..1788#1906..2048#2188..2431#2538..2642#2987..3169#3257..3461#3554..4038#ggtcgccgttcttgattggcttggctggctttggcttccctgttcgatattgatttggtttgtactagtagaatactgctggtattagctaggcgttgatagtggccggggcttagcgtcaggtccactgaccactggggcactaatcaaagttgctgatttctttcgctttcttttttcgttgcaatgcgatcctcatgtcggcgcgggtatcgcgggggagatcaaagttcgtagcttcgttagccgcttagcctactagtgctctcattagtctataagagagaataggtcttttgctttgctttcaggacatggtcacctttctcaggcagcaagcgtaagcaaggcagaggagagggaaagaacctctctgcagtgctgctgctgctagcttgcagaaaaaaaaaactctcatcttttgcaggaagagacatcactgtttctgcattcgtgtgcatttggattaagctttgcttatccctttttagtggagattgttgagtatatcaggtaaacacatgtgcagtcttgctgtgctgtatgtatgtgtgtgcatgattttgtcgtttgttttatgcatgctgcgttatctgctcttattcaaactcttgttatgtgctggctggctgattcaattaatcaggttaggtacatgattgtttcccctgtaagtcatgttggttttcagcaacttgatgcgattggataaacaagtttgaaaaaccgaccatgttttgagtatgctgttcccttgtttctgttttgattgcaacctaagagactcttgagtcttgactattctaatgtttgaagatgttgttgttcaagcaagagacgtgcactactatgctcctatgtagttaccctcatactagcctgaaaagcttacactcatagatatgcttctctcacaggtctatatattggcagctctggttggagatagacactcacactgagccaagatggggagtttgcacaagttcagtgttattctcctcatgttatgttttgctacgttggggagcgctcagtatgtcaagtataaggatccgaagcagcccgtctctgttcgtgtcaaggatctgctcggccggatgactctcgctgagaagattggccagatgacccaaatcgagagggagaatgccacggcggagcagattgccaagtacttcataggtgtgtcatggtttactactcatgctcaagtaatgtgaacgatgaaatgctggatactatatgttttgtgttttgacattggtgtgctgtgatgcaggtagtgtactgagtggtggaggcagtgtgcctgctcctcaggcatcagctcaggcttgggcttcaatggtgaatgaaatgcaaaagggtgccctttcgacccgactaggtattccgatgatctacggtattgatgccgtgcatgggcacaataacgtctacaaggctacaatcttcccccataatgtcgggctcggcgctaccaggtatgaagtgattttacttttgatatgataattacctcttacacaacaatacgtggatacttttttatgtttgactacaagactgcaacatcttaaggtgataacacagttgtgatgcacacagtgcttgttctaaaaaacagggtgcttatgacgcatttggtggtctgtatttaaaaaaatcttgattcttgatttgccgtgttgcagggaccccgacctagtaaagaggataggagaagcaactgctcttgaagttagagctactggaattccctacgtctttgctccttgcgttgcggtaattaatactagatgatacctcttctatagtgggtgatctcaatctggttagggtgcgtgttcccttttcatcagcactatgaactcactgttgtgtttacatgatacctctcaggtttgcagagacccaagatggggacgctgctacgaaagctatagcgaagacccaaaggttgtccagtcattgaccacactcatctctggcttgcaaggcgatgttccatcaaatgatgtaggaagaccatatgttggtggaaggtatacctctgatactgtatagctttaaaatcatctttgtggcttgtacctttctgcctataattgacaggtgaaattggcgtatcactgcaatatactactatatgactaactttggtactacttgcttactgtgcagtaagaaagttgctgcatgcgcaaagcactatgttggtgatggtggaacggtcaagggaatcaacgagaacaatacaatcatcgatactcacgggctgttgaccattcacatgcctccttattataattctatcattagaggagtctccactgtcatggtttcatactctagctggaatggagtaaaaatgcacgcgaaccatcacctaatcactgattttctcaagaacaagctccgcttcagggttagtttttctaaaaaaacaaaatagttatcttgatttattttcttcaatgtatatttggagatattgcaggcgtatttaattgctttggatcttgtgcaaacagggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataagaactattcttactcaatcgaggctggaattggtgccggcattgacatggtgagatatgcagaccatgtgcattaacttcttcccttttttttaggaagattgaattatatccctagcctctatgtcaaggacgcataaagtcatagttaatttctcttttgaaaatccaataaagcatttgatttgttagtctgtccaactttagtttgtgggataaaaggtggattcaacaattaaaacatacatcatgttagaagagtggtcttgtcttgttattacgagtttatgacacatcattgatgagccttttttctactatactaatacagatgcgatgctttattccctttcttatcaatttatcatgcctaatgtatatgtgctgtttgcagatcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaacaaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagttcaccatgggtctatttgagagcccttttgctgactctagcctcgccgatgaacttggaaagcaagtcagtgctgaacacctcaatcctcctattactcacacttcatatatcaagaatttttactgaccaattccatctgaaccaccataggagcaccgtgagctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaagaacggaaaatcctcctactctccggtgcttcccctcccgaagaaagccggtaaaattctcgtcgcgggaagccatgctgatgatttgggcagacagtgtggaggatggaccatcacctggcaaggacagcccggcaacaacatcactgctggtaaactattcatgatcaaaatgtttcaatgcttgtaacttcatctgagttttggtgggtggcaagaattaaaatccacggacaatgtgcaggcacgacgatcctgtcggcgatcaaggccaccgttgatcccagcacgacggtggtgtactcggagaacccggacagcagcgtggtcaccggcgacaagtacgactacgcgatcgtggtggtcggcgagccgccgtacgcggaggggttcggcgacaacctgaacctgacgatcccggagcccgggccgacggtgatccagacggtgtgcaagagcatcaagtgcgtcgtggtgctcatctccgggcggccgctggtggtggagccgtacatcggcggcatcgacgcgttcgtggcggcgtggctgccggggacggaggggcagggcgtggccgacgtgctgttcggcgactacgggttcaccgggaagctgtcgcggacgtggttcaagtccgtggaccagctgccgatgaacgtcggcgacgcgcactacgacccgctcttccccttcggctacggcctcaccacgcaggcgcacagcagctgatgcggcggcgatgtcggtggagagtgacgttggttgggacgtgacgccgtcgtgacgagagagatggcgatcatgtagtactacatacacatgttgttggggtggatttgtttgtggtgggggaatgcaataacgatgagagtgagtgatgtgctcaattcttgaggctgtggctgttgttagtgtcatagtgttgggttgtggaataataaaaaatcagatgcgcttttgccttctttctctcggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0749300, RefSeq:Os03g0749300