Os03g0755100

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Gene Name

Os03g0755100

Description

Similar to Transporter associated with antigen processing-like protein

Version

NM_001057846.1 GI:115455420 GeneID:4334151

Length

5341 bp

Definition

Oryza sativa Japonica Group Os03g0755100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32000637..32005977

Sequence Coding Region

32000766..32000822,32000954..32001001,32001141..32001176,32001280..32001354,32001664..32001788
,32002026..32002122,32002218..32002392,32002643..32002761,32002964..32003074
,32003149..32003293,32003436..32003568,32003641..32003716,32004237..32004302
,32004404..32004511,32004846..32004953,32005044..32005241,32005439..32005687

Expression

GEO Profiles:Os03g0755100

Genome Context

<gbrowseImage1> name=NC_008396:32000637..32005977 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32000637..32005977 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccagccggagaacgtcgggttctgccgcgtcatcaagttggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactggttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacattgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaatgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaaactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatag</cdnaseq>

Protein Sequence

<aaseq>MGKNLRIKTGNRAPLLAQGETSRALSDLEEGSNVQPENVGFCRV IKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTG TILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGEL LSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAV RKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKL GLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSV SALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSR PSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEIS HQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ YKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLM KGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGPRF EGTSNATAEIEPISNGQ</aaseq>

Gene Sequence

<dnaseqindica>130..186#318..365#505..540#644..718#1028..1152#1390..1486#1582..1756#2007..2125#2328..2438#2513..2657#2800..2932#3005..3080#3601..3666#3768..3875#4210..4317#4408..4605#4803..5051#gcctcgtcaagtcagtctccctctccccgcgcggccgcgccccacccacacaaaccctccaccaccaccacccacccacccatccgttggccaccggcggcgtgggcggagggcggcgggccggcggccatggggaagaacctgcgtatcaagaccggcaaccgcgccccgctcctcgcccagggggtgtgttcccgttccccgcctttctgtctcttctccctgtatctctctctctctctctctctctctctctctctctctctctgtctctgcttttgcgcggctaattctgcttccgtgtggctcgatcgcaggagacgtcgagggcgctctccgatctcgaggaggggagcaacgtccaggttcggagccgaatccgctttcctcgattgcacccgagtggtgcagctgctgctagagcgatgcaccgatggctaaatggctaatttgatttcatttttttttctcttttgccccttcgtctgattgtgatcatctcagccggagaacgtcgggttctgccgcgtcatcaagttggtgagtccatgctctgcactagacgagggaaaaaaaaacattctggttatttttgatgatgcggttgattaattgctgaacacgtgagccatatgggttgcaggcgaggcatgacgcggggaagctggttattgccaccatggcgctgctcgtcgcttcgctcagtaacattctcgttgtaagtactcgccacttgttgattgagtcagagccaatttaagctctgttgtgttgttctgatgccgaaactgcgaaagcacgatacattggttcttgtaaacaaaggtcttttaaaaaaaagctgaaatagtacataattatgggagtctcatttgatctttgacctaacactataacaatctgaagagttatttttatatctgaaaagtgtagagcaggatcaaagggtgttgcagctcttatctcagtatcattgttgcacatttttcttgttgtaatgtttggatcatcttgtgctatcccacagccgaaatatggtggaaagataattgacattgtttcaagagatgttcggcgtccagaagataaagctcaagccctagatgatgtgacgggcacaatattgtatattgtcataatcgtcgtaactgggtatcttcttgaaaaccttgaattaatattgtaaagatgcactctgtctatgtcattaccaactttcgtttgttcaggacaaatctggtaggtctaacatgctgcaatttttaattagtaattattaaaccattaatatctaatactacacatttttagaaagtaattaacactaatgtgataaacaaaagtggtattatttacggaaatttcatcagtcaactgcccctgtttcagttcagtttgcacagcgcttcgggcatggctattcaattctgctagtgagagagtagttgctcgactgaggaaggacttgtttagtcatctagtaaatcaggcaagtaccttacttccatcgaaattttttcagtgttaaagaagtattgcatgcagctatattcattctcaacagcttatcttgtgcaaacacaggaaatagcattttttgatgtcactagaacaggagagctattaagcaggctttctgaagatacgcaaataataaagaatgctgctacaactaacctttcagaagcattgcgcaatattactactacgtctattggtcttggttttatgtttgcaacttcatggaaattaacatgtaagttcatcaattccaaatgtttttttttgctatatttaaagaacttgttggtattttattttggttttgtgaggcttaattatgtactttggcttcatatgcttaacttaaacttttcagattagcattattttcctttcaaatcactaaagtgtgtttgtcttttgattttatacaattactgtctcactgtgtatgtgtgatctctgtaaaactgaagtaaacctcattcctactttcttcacagtgctggcacttgtaattgttccggttatatcaattgctgtgcgcaaatttggacgctttcttcgtgaactttcacatcagacacaggcagcagctgctgttgcttcatccatagccgaggtttgtagcatcagaacatcccgttgtagttcattgagaatttgagcaagttagtttttttattgaatctttttttctttaggtgccatcaccaaatataaaaaccaaatatgtgttttagtttgattgctagcatatggtagaagtaaaatcctaggctcttcatttttgttccttgacaaatctatctaattgtgttcaggaatcttttggtgccattcgcacagtaagatcgtttgctcaggagagtcatgaagtcttacgatatggtgagaaagtagatgagacactgaaactcggtctcaagcaagctgtgagtatgctaccattaatgtaaaatcagcgacttatggcacaaccgatctgattcaacgcattcttttgtagaaagttgttggcatgttttctggagggctcaatgcagcatcaaccctatcagtggtcattgtagttatttatggcgctaacttaaccatcaacggttacatgacaactggttctctcacatcgttcattttgtacagccttacaggtattgttcagttttgtgggtattgtgttactggacctaatgataccatatattatataacttcacatctagaagtcgtcactggccatcatgtttggtatgttttgatctttctgaacaattatatttcttgcatatgcagttgggtcgtcagtctctgccttgtcaggactatacacaactgtaatgaaagcatcgggcgcaagccgacgagtatttcaacttctggaccgtgtttcctcaatggcaaattccggggacagatgcccaacaaagtatgtttctaatggtatatcagcattcctgttttgttctacctatcgtctttgacatttcgtttattccagtgaaaatgatggggaggttgagctcgacgatgtctggtttgcatatccctctcggccttctcatatgattctgaaggtataatattttctcaacgcattactttgcagactcacagctgatatgataacttagaattttgaagatttgataattttcctagcatggtgtatgtcaataaaaagctagccattgaaattgcatcgcttataattcttgttcatttagtatcattggttcatttttctgaaaaaaaaaagtttaacattccgattcagatcttttaccatgttttatctgcaacataacagcaatatctactacaaactttaccaaatagagtattagtttcctgtcattgtagctgttttatatggaagaaatggataggtttgacttgaaatatctgaaagttttagattgcatgtgggttaaataattatatgcttgaactcataaaataagtaattacattaaaatgatatgtatacaatctttcaacaggtttaccatgagcatggaacttttttttcaactatggcaaaatccacattgcatatatcagcttaagattttatctaatgccatcaaattgcagggaataacgttgaagttaacaccaggttcaaaggtagctcttgttgggccaagtggtggtgggaaagtgaggactgttttcctatatgcgaattacttggcatgttgtttggccgatgaatttgtttttcaattgcactttacaatttgaacatcacatttttgcagactacaatagcaaatttaattgaacggttttatgaccctctaaaaggaagaatcttgcttaatggagtgcctttgccagagatttcacatcagtttctccacaggaaggtaacgtttgtgcaactatttgtcatatagtgaactgtttacttgttattaacacggaaacaagtatttctatagtaacttcacatatggttgtattgttaggttcacattcctaatggctggtttgatagtacttcaaatctttggccgtaatgtcctttaaattcaggaatcttgtaaatcctgtaaacatggttcaacaatataatctagaagtactttagaatttaataacactcacttcaataatttcggaacctttacaattaggagctcgtgatagaaatagatgtgcatggttatcttagttcagaaaatgtttgtctaatttcaggttagcattgttagtcaggagcctgtgctctttaactgctccatcgaagagaatattgcttacggattagagggcaaagccagctctgctgacgttgagaatgcagctgtaagtatctgttacaactactaaccacgctgaaattttattttatttttggaatatcttacattctcattagctaacttctggatgcagaaaatggcaaacgcccacaatttcatatgcagttttccagaccaatacaagactgtagttggagagcgaggcatcaggttatcaggtgggcagaagcagagagtcgccattgcaagagctttgcttatgaaccctcgagtgctcctcttggatgaagctaccagtgcactagacgctgaaagcgagtatcttgttcaggtacctctatcacaccaccgcttctaattgctgacctgattccaagtttccaaccaaaaaaaacaagcagttatctacttatctttcttcaatgccctgatgcctctgtacccatcaacatatgatgatgatatgaacatgcttgatctcttgcttggagagccagaatatgacatggttcttccttgatgccacaggatgcaatggactctctgatgaaagggaggaccgtgcttgtgatagctcaccggctatccaccgtcaagagcgccgacaccgtcgccgtcatctccgacggccagatagtggagagcggcacgcacgacgagctcctcagccgcgacggcatctacacggccttggtgaagaggcagctgcaagggccaaggttcgaaggcaccagcaacgcaacagccgagatagaacccataagcaatggccaatagacaaatatagcctcttctgcatagtacttgatttttgtcccttctccgggcaggtggacaccgtttcctgatgatccactgaatgtaaacggatatgaatgcatccactctgaaaatgccacgcagtcccgcacaacagtacaaacacattctaattgtcacgagctgctgctgtgtcttacacaattaactcgcttatttttttatagaatgtaattatgccttgatggcgtgatgttgcgcggatgggtaatgaccgcaatcaatattgtgttgcttgattgcttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0755100, RefSeq:Os03g0755100