Os03g0761500

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Revision as of 13:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0761500| Description = Similar to Subtilisin-like protease (Fragment)| Version = NM_001057888.1 GI:115455504 GeneID:4334194| Length = 2812 ...")
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Gene Name

Os03g0761500

Description

Similar to Subtilisin-like protease (Fragment)

Version

NM_001057888.1 GI:115455504 GeneID:4334194

Length

2812 bp

Definition

Oryza sativa Japonica Group Os03g0761500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32338725..32341536

Sequence Coding Region

32338995..32341289

Expression

GEO Profiles:Os03g0761500

Genome Context

<gbrowseImage1> name=NC_008396:32338725..32341536 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32338725..32341536 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcgccatggcgagagatgtgtgatccttgctgtcgccgccgtggctcttgtcgcggcggcgacggcaacggcggcggcggccgttgggggtgagaggaggacgtacatcgtgcacatgtcgcggtcggcgaagccgaacgatttcgtggagcacggcgagtggtacgcggcgtcgctgcagtcggtgtccgacgcggccaccgtgctgtacacctacgacaccatcgtccatggctactcggcgcggctgacgcgcgcggaggccgaggcgctggagtcgcagcccggggtgctcctcgtcaacccggaggtgcggtacgagctgcacacgacgcggacgccggagttcctggggctggaccgcacggacgcgctgttcccgcagtcgaacaccggcagcgacgtcatcgtcggggtgctcgataccggcgtgtggccggagaggccgagctacgacgacgccgggctcggccccgtgccggcgggatggaaggggaagtgcgaggaaggcaacgacttcaacgcctccgcctgcaacaagaagctcatcggcgcgaggttcttcttgaccgggtacgaggcggcgaagggccccgtcgacacgtccaaggagtcgcggtcgccgagggacaacgacgggcacggcacgcacacctccagcacggcggcgggatccgccgtgcgcggcgccgacctgctcgggtacgccgccgggacggccaagggcatggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttcagctccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgctctcgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttacagcgccatggaaagggggatcttcgtgtcctgctcggcggggaacgccgggccaggctcggccacgctgtcgaacggcgcgccatggatcaccaccgtcggggccgggacactcgaccgcgacttccccgcccacgtcgtcctcggcaacggcaagaactactccggcgtctccctttacagcggcaaacagctgcccaccacgccggtcccattcatctatgccgggaacgcgtcgaacagcagcatgggcgcgctctgcatgtccggcagcctaatcccggagaaggtcgccggcaagatcgtcctctgcgaccgtggcaccaatgccagggtccagaagggcttcgtcgtcaaggacgccggtggcgccggcatggtgctcgcgaacaccgccgcgaacggcgaggagctcgtcgctgacgcgcacgtcctcccgggcgccggtgtcgggcagaaggccggcgacaccatgagagcgtacgcattgtccgatccgaacccgacggcctccatagtgttcgccggaacacaggttggcatccagccatctcccgtcgtggccgcgttctcgtccagggggccgaacaccgtgacgcccggcatcctcaagccggacctgatcgcgcccggcgtcaacatcctcgcggcgtggtccggatccgtcggcccctcggggctcgccggcgacagccgccgcgtcggattcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgggctggcggcgttgctccgcgcggcgcaccaggactggagcccggcggcgatccgctcggcgctgatgaccacgtcgtacaacggctaccccaacggcaacggcatcctcgacgtggccaccggcctcccggcgacgccgctcgacgtcggcgccggccacgtcgaccccagcaaggcggtggatccgggcctcgtctacgacatcgccgccgccgactacgtcgacttcctctgcgccatcagctacgggccgatgcagatcgccgcgctcaccaagcacacgacggacgcctgcagcggcaaccgcacgtacgcggtgaccgcgctcaactacccgtcgttctcggtcacgttcccggcgaccggcggcacggagaagcacacccgcacggtgaccaacgtcggccagcccggaacatacaaggtgacagccagcgccgccgcaggcagcacgccggtcacggtgtccgtcgagccgtcgacgctgacgttcaccaagtccggcgagaagcagagctacacggtgagcttcgcggcggccgcgatgccgtccggcacgaacgggttcggccgcctcgtctggtccagcgaccaccacgtcgtctccagcccgatcgccgtgacatggacctga</cdnaseq>

Protein Sequence

<aaseq>MWRHGERCVILAVAAVALVAAATATAAAAVGGERRTYIVHMSRS AKPNDFVEHGEWYAASLQSVSDAATVLYTYDTIVHGYSARLTRAEAEALESQPGVLLV NPEVRYELHTTRTPEFLGLDRTDALFPQSNTGSDVIVGVLDTGVWPERPSYDDAGLGP VPAGWKGKCEEGNDFNASACNKKLIGARFFLTGYEAAKGPVDTSKESRSPRDNDGHGT HTSSTAAGSAVRGADLLGYAAGTAKGMAPHARVATYKVCWVGGCFSSDILKAMEVAVN DGVDVLSLSLGGGTADYYRDSIAVGAYSAMERGIFVSCSAGNAGPGSATLSNGAPWIT TVGAGTLDRDFPAHVVLGNGKNYSGVSLYSGKQLPTTPVPFIYAGNASNSSMGALCMS GSLIPEKVAGKIVLCDRGTNARVQKGFVVKDAGGAGMVLANTAANGEELVADAHVLPG AGVGQKAGDTMRAYALSDPNPTASIVFAGTQVGIQPSPVVAAFSSRGPNTVTPGILKP DLIAPGVNILAAWSGSVGPSGLAGDSRRVGFNIISGTSMSCPHVSGLAALLRAAHQDW SPAAIRSALMTTSYNGYPNGNGILDVATGLPATPLDVGAGHVDPSKAVDPGLVYDIAA ADYVDFLCAISYGPMQIAALTKHTTDACSGNRTYAVTALNYPSFSVTFPATGGTEKHT RTVTNVGQPGTYKVTASAAAGSTPVTVSVEPSTLTFTKSGEKQSYTVSFAAAAMPSGT NGFGRLVWSSDHHVVSSPIAVTWT</aaseq>

Gene Sequence

<dnaseqindica>248..2542#ggtcatgtggtggtggagaggctaaaaaaccagagataaaatgagagcaacgccatgtgcttcaccctcttccttcttctatctcgctcgccttcccttcgctgaagcatccgtccatctgttcgctttgtcctcttgcaatcattcactctccttgctcgattctataaacacgcagtgaggctccgatccgccatcggctcaccgccattgctgaggaacacagctttctcttttttttcccacgatgtggcgccatggcgagagatgtgtgatccttgctgtcgccgccgtggctcttgtcgcggcggcgacggcaacggcggcggcggccgttgggggtgagaggaggacgtacatcgtgcacatgtcgcggtcggcgaagccgaacgatttcgtggagcacggcgagtggtacgcggcgtcgctgcagtcggtgtccgacgcggccaccgtgctgtacacctacgacaccatcgtccatggctactcggcgcggctgacgcgcgcggaggccgaggcgctggagtcgcagcccggggtgctcctcgtcaacccggaggtgcggtacgagctgcacacgacgcggacgccggagttcctggggctggaccgcacggacgcgctgttcccgcagtcgaacaccggcagcgacgtcatcgtcggggtgctcgataccggcgtgtggccggagaggccgagctacgacgacgccgggctcggccccgtgccggcgggatggaaggggaagtgcgaggaaggcaacgacttcaacgcctccgcctgcaacaagaagctcatcggcgcgaggttcttcttgaccgggtacgaggcggcgaagggccccgtcgacacgtccaaggagtcgcggtcgccgagggacaacgacgggcacggcacgcacacctccagcacggcggcgggatccgccgtgcgcggcgccgacctgctcgggtacgccgccgggacggccaagggcatggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttcagctccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgctctcgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttacagcgccatggaaagggggatcttcgtgtcctgctcggcggggaacgccgggccaggctcggccacgctgtcgaacggcgcgccatggatcaccaccgtcggggccgggacactcgaccgcgacttccccgcccacgtcgtcctcggcaacggcaagaactactccggcgtctccctttacagcggcaaacagctgcccaccacgccggtcccattcatctatgccgggaacgcgtcgaacagcagcatgggcgcgctctgcatgtccggcagcctaatcccggagaaggtcgccggcaagatcgtcctctgcgaccgtggcaccaatgccagggtccagaagggcttcgtcgtcaaggacgccggtggcgccggcatggtgctcgcgaacaccgccgcgaacggcgaggagctcgtcgctgacgcgcacgtcctcccgggcgccggtgtcgggcagaaggccggcgacaccatgagagcgtacgcattgtccgatccgaacccgacggcctccatagtgttcgccggaacacaggttggcatccagccatctcccgtcgtggccgcgttctcgtccagggggccgaacaccgtgacgcccggcatcctcaagccggacctgatcgcgcccggcgtcaacatcctcgcggcgtggtccggatccgtcggcccctcggggctcgccggcgacagccgccgcgtcggattcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgggctggcggcgttgctccgcgcggcgcaccaggactggagcccggcggcgatccgctcggcgctgatgaccacgtcgtacaacggctaccccaacggcaacggcatcctcgacgtggccaccggcctcccggcgacgccgctcgacgtcggcgccggccacgtcgaccccagcaaggcggtggatccgggcctcgtctacgacatcgccgccgccgactacgtcgacttcctctgcgccatcagctacgggccgatgcagatcgccgcgctcaccaagcacacgacggacgcctgcagcggcaaccgcacgtacgcggtgaccgcgctcaactacccgtcgttctcggtcacgttcccggcgaccggcggcacggagaagcacacccgcacggtgaccaacgtcggccagcccggaacatacaaggtgacagccagcgccgccgcaggcagcacgccggtcacggtgtccgtcgagccgtcgacgctgacgttcaccaagtccggcgagaagcagagctacacggtgagcttcgcggcggccgcgatgccgtccggcacgaacgggttcggccgcctcgtctggtccagcgaccaccacgtcgtctccagcccgatcgccgtgacatggacctgaccgtcgtcgcgctcatagctagatcttctggatgatccatcaatggcgggcgcaagagattatccgggataattagcgtgtaatctgccgattagtgtggcgaagtatcgtttcaatttcttagctccagccttgtttagttgttcgaactgtggcatagcgaggaagtgagtgagtgagtgagagtgatccgagttagctccactcctaacaggagtccaaaaaaattaaaggataatgaatggaccagcaaagcaagtggttgctcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0761500, RefSeq:Os03g0761500