Os03g0761900

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Revision as of 13:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0761900| Description = Similar to Prolyl 4-hydroxylase| Version = NM_001057890.1 GI:115455508 GeneID:4334196| Length = 3992 bp| Definition...")
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Gene Name

Os03g0761900

Description

Similar to Prolyl 4-hydroxylase

Version

NM_001057890.1 GI:115455508 GeneID:4334196

Length

3992 bp

Definition

Oryza sativa Japonica Group Os03g0761900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32354458..32358449

Sequence Coding Region

32354527..32354706,32354823..32354945,32355874..32356031,32356498..32356600,32357180..32357275
,32357470..32357535,32357603..32357722,32358008..32358094

Expression

GEO Profiles:Os03g0761900

Genome Context

<gbrowseImage1> name=NC_008396:32354458..32358449 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32354458..32358449 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagggcggggtcatcaggagcggcggcggcgtcggcggcatcggcgtcggcggcggcggcggaggcgggggagccggcggggggctgatgcgcacgcggctgcgcctccccgtcgtgctcctctcctgctccctcttcttcctcgccggcttcttcggctccatcctcttcacccaggatccgcagggggaggaggagctcgacacgccgatgaggagggagcggctgatggaggcggcgtggcccggaatggcgtatggcgagtccggcgagccggagccgtccttgatcccttaccagattttgagttggcaacctcgtgcactatattttccacaatttgcaacatcgcaacagtgcgaaaatattgtaaaaactgctaaacaaaggcttatgccatcgacattggctttaaggaaaggagaaactgaggagagcaccaaaggaataaggacaagctcaggcacatttctaagttctgatgaagatccaaccggaacccttgctgaagttgaaaagaagattgcaaaggccaccatgatccctagacatcatggggagccctttaatatcctgcgctatgagattggacagaggtatgcttcgcattatgacgcattcgacccagctcagtatggtccacaaaaaagtcaaagggtcgcgtctttcttgctttatctcacggatgttgaagaaggcggagaaaccatgttcccatatgagaacggggaaaacatggatatagggtatgactatgaaaagtgcattggcttaaaggttaaaccaaggaagggtgatggtctcttgttttactcccttatggtaaatggcaccattgatccgacatctcttcatggtagctgcccagtgatcaaaggagaaaaatgggtcgccacaaaatggattagagacaagagtaaggcagtgtaa</cdnaseq>

Protein Sequence

<aaseq>MKGGVIRSGGGVGGIGVGGGGGGGGAGGGLMRTRLRLPVVLLSC SLFFLAGFFGSILFTQDPQGEEELDTPMRRERLMEAAWPGMAYGESGEPEPSLIPYQI LSWQPRALYFPQFATSQQCENIVKTAKQRLMPSTLALRKGETEESTKGIRTSSGTFLS SDEDPTGTLAEVEKKIAKATMIPRHHGEPFNILRYEIGQRYASHYDAFDPAQYGPQKS QRVASFLLYLTDVEEGGETMFPYENGENMDIGYDYEKCIGLKVKPRKGDGLLFYSLMV NGTIDPTSLHGSCPVIKGEKWVATKWIRDKSKAV</aaseq>

Gene Sequence

<dnaseqindica>70..249#366..488#1417..1574#2041..2143#2723..2818#3013..3078#3146..3265#3551..3637#aaagcacacgcgtcaccactcactcacaagtcacaactccgacgagacccaacccaacccgggaaggcgatgaagggcggggtcatcaggagcggcggcggcgtcggcggcatcggcgtcggcggcggcggcggaggcgggggagccggcggggggctgatgcgcacgcggctgcgcctccccgtcgtgctcctctcctgctccctcttcttcctcgccggcttcttcggctccatcctcttcacccaggtaagcgaggcgtagcgacggcgagacccccaccccaccgccaccctcgtttcgtttgtcgggttctgatctgggtggtggttttttggcgcgcggctgtgttgttcccgaggcaggatccgcagggggaggaggagctcgacacgccgatgaggagggagcggctgatggaggcggcgtggcccggaatggcgtatggcgagtccggcgagccggagccgtccttgatcccttaccaggtcacgcctcgcttcgatttctcgattggttgcaatgttgcattgatgttgtttatttctgacggatattgacgttttcttagaataatagttttgggttgaggtgactagcattggggcggtagtgttcttcgtgaattttacgtcacgatgagaatcctctgttcccattatttgttttgtttcgatagttggtttgttgtgatggacacttgcaggggaagtaatttgtttggtgtaaagtgcctgccaaatccgaacttactctctgtatgtataaaagagattttgatgtgatggtgccacggtatatttgctagtggggaattccgaattcaggttgttgtgagcatgcagatgtcgtgtgcttgaatgtgatggcttgatggtatactcgtatgcgtgtggaatgtgtgaccgccgcgcacctgtgttagtgacattacataacttacgagtgaaacaagtttttttttgtgagaatcacgtaatgtgcatgaccaaaatcagtttgtttttctaccagttgaactagtctgttaatttgaggtttgtagtacttctacttcacctatactccgtattggacaatgtgcacaggctgttgcctatgtaaggaaagttattagcaataattgatggagctgctagatttcatgccctgtatggctgcaacctgcttatttattgctctaagtaggtccttgggttaattaatatactttatttgatgtgtcctagccctgaagaacagcccactagtccttttactaagtatgcggtgaacttcttttgtgtctgtggtatgagcttacttatgttaaaccacaatctcagttgcattaattaatgctgcttatcaccttctaattttctattgtaatctggttggtggtgctttagtaatgtaaagttgactcttctgcagattttgagttggcaacctcgtgcactatattttccacaatttgcaacatcgcaacagtgcgaaaatattgtaaaaactgctaaacaaaggcttatgccatcgacattggctttaaggaaaggagaaactgaggagagcaccaaaggaataaggacaaggtactgattaattaaagccacaaagtgcttgcaataaataaaaaagtgaagataaccaggctagtgatcattaggtagttatggtggatttatgatacttctattgtggtagtatcatggaaattctaagcaatcatcttttgttttgtttatttgcttcctctagtgggaacacgatacttgtcttcaaattataacctctaaataaatttctttggttccaaatgggaattagtaatttattctatttcatgtatttcttattgaaaagatttgacatctcagagtgcttggtcatatatttcattttggcatgctgatccaattgtaatatatgcttcttgtagttgcagcttcagatttatactttgccatgatccaactggaaccctttcagaaatgactagtcattatggtcttatctaatcttgcattgcactaatggtaaattgctattgccaaacagctcaggcacatttctaagttctgatgaagatccaaccggaacccttgctgaagttgaaaagaagattgcaaaggccaccatgatccctagacatcatggggaggtactcttttatgaattttgtgatcacgcacaaaattatagcactcctctttccaattagaagaaccaaaggaaaatattctttctaggattccattcacatgttcattacttagttgattcattctttctgctaagtgcactgatgctggcagtggcatcttgtatcaaagaagacccttggagcttaaattgctctttttcacatgatatttgcatacgaagagtatctataaataacaaaatcatttttgtgtagatatgcaacctaactttagaaataaattactaactgtttgcattaatgaactagaagcaacatgtttctgtgattttgtattggtccttgcagtaccataatttatgcacattttaattcgtttttaccctttcttgaaaagaaatgttgacagtgatataagaatgcaaaccttgtggtgttcttctgtgtaattgttaattttttgtcctcattaaagtattaaacatttctattgctacccatatgaaatatagttttcggatcattcagattatgaaaagaaattttattttaccatattcatttgttatgttacagccctttaatatcctgcgctatgagattggacagaggtatgcttcgcattatgacgcattcgacccagctcagtatggtccacaaaaaagtcaaagggtatgctcctacatttgcttgcattttgcctaacctatatttctcggttctagatgtcttgaagattgggctctttttgttatttatgtgaacagaggtgctaagtctgcttaatggaccactagatagaataatttaggttgaatgatttgacaagaatatagctaaggaactattgaaatgcaaattttcaggtcgcgtctttcttgctttatctcacggatgttgaagaaggcggagaaaccatgttcccatatgaggtgagcattgaggattttaccatgtattccatcaacagattctaatttgttctttattggtttgcagaacggggaaaacatggatatagggtatgactatgaaaagtgcattggcttaaaggttaaaccaaggaagggtgatggtctcttgttttactcccttatggtaaatggcaccattgatccggtatgttcttgccactcaagttgttcgtgacttcccattttgtgaaaagattctaagttagctacatatgtcgttgcaaaatcaaagattttagtaaatcgagactcatattctatctgtactggatgctaatttctgtgcaagacatatctagagtaacactagttcaattataatactgattctagatgtgttcgggaaaaaaaaaatactgattctagatggctttgcacgccaggcatcgtttgggattttaactttatattgtgggcgtactgtttgcagacatctcttcatggtagctgcccagtgatcaaaggagaaaaatgggtcgccacaaaatggattagagacaagagtaaggcagtgtaaatgtggtataggagtctccacgccccatgtagatcataggcatatatatactaaacaatctttgtacacgtttctgtacgaacattacatttattcaattttcatcagcatgaatgaactagtgagaaatgatgtcactttctccttttgagtcttcgaagagaagtatttgcacttgtaggtctgggtgttaatttttccacacttgtagggcaagaaaatttgctgctatgggtgacctgatcttctgcaagtctttggaggagctggcttgtactttctcaacttgtacggcacgtcgattagtctgaatagcttcctctgggccaggggcaggtgcatattcgcaagatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0761900, RefSeq:Os03g0761900