Os03g0763000

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Revision as of 13:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0763000| Description = Similar to Casein kinase II alpha subunit| Version = NM_001057899.1 GI:115455526 GeneID:4334206| Length = 4422 bp| ...")
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Gene Name

Os03g0763000

Description

Similar to Casein kinase II alpha subunit

Version

NM_001057899.1 GI:115455526 GeneID:4334206

Length

4422 bp

Definition

Oryza sativa Japonica Group Os03g0763000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32416746..32421167

Sequence Coding Region

32416806..32417140,32417248..32417377,32417811..32418005,32419341..32419498,32419859..32419949
,32420027..32420092,32420434..32420516,32420598..32420661,32420744..32420812
,32420901..32420936

Expression

GEO Profiles:Os03g0763000

Genome Context

<gbrowseImage1> name=NC_008396:32416746..32421167 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32416746..32421167 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctggtgcgccgcgcgcagccgcctcctccccctcgccaccgcgccgcagctgctccgccgcctcctcctctcctccgctgcggccccgcgctacgcgcacccccaccaccaccacagcaacagccgccgccgccgccgccccctcgcccccaccgtctacgccgctgccgcggcagccgcagccgaggcgccgctccccatgccgccgcgcatcggccgcgccacgcggcaccccgggggcgccgcctccgtggcgcgcgtctacgccgacgccaactcccagcggcccaaggagtactgggactacgagtcgctcgacatcgaatggggggagcaggatgggtacgaggtgctgcgcaagcttgggagggggaagtacagcgaggtgttcgagggattccggcccgggggtgacgagaggtgcgttattaagatcctcaagcccgtcaagaagaaaaagataaagagggaaataaagatacttcaaaacttatatggcggaccgaatattgtaaagctacttgatgttgtcagggatgatgaatcgaagacacctagtttgatctttgaatatgtcaacaatactgatttcaaagtactctacccaacactattggattacgatatcagatactacatttacgaattattaaaggcactagattattgtcattcacgaggcatcatgcatcgagatgtcaaacctcacaatatcatgattgatcatgagaaacgccagctttgtcttattgattggggtctagcagagttctatcatcccaagatggaatataatgctagagttgcttcaagatcttataagggccctgaacttcttgtggatttgctagattatgattactcgttggatttgtggagccttggttgcatgtttgccgcaatgatattccgagtcgaccctttctttaatggtcaggataactacgaccaattagtcaaaattaccgaggttcttggaacagaagatttctacaattaccttgaaaagtatggtcttgagcttgacccgcagcttgaaagacttgttggaagacataataggaagccatggtcaatgtttgttaactcggggaacagacacctagcaagccctgaggctattgattttgtagacaggttgcttcgctacgatcaccaggaaaggcctacagcaaaggaagccatggctcatccatatttcaatccagtgagaagcacttaa</cdnaseq>

Protein Sequence

<aaseq>MAWCAARSRLLPLATAPQLLRRLLLSSAAAPRYAHPHHHHSNSR RRRRPLAPTVYAAAAAAAAEAPLPMPPRIGRATRHPGGAASVARVYADANSQRPKEYW DYESLDIEWGEQDGYEVLRKLGRGKYSEVFEGFRPGGDERCVIKILKPVKKKKIKREI KILQNLYGGPNIVKLLDVVRDDESKTPSLIFEYVNNTDFKVLYPTLLDYDIRYYIYEL LKALDYCHSRGIMHRDVKPHNIMIDHEKRQLCLIDWGLAEFYHPKMEYNARVASRSYK GPELLVDLLDYDYSLDLWSLGCMFAAMIFRVDPFFNGQDNYDQLVKITEVLGTEDFYN YLEKYGLELDPQLERLVGRHNRKPWSMFVNSGNRHLASPEAIDFVDRLLRYDHQERPT AKEAMAHPYFNPVRST</aaseq>

Gene Sequence

<dnaseqindica>61..395#503..632#1066..1260#2596..2753#3114..3204#3282..3347#3689..3771#3853..3916#3999..4067#4156..4191#gctgagcggcgtaggtcgcggagaccaacccacccatccctcgcgccggaagagaggtacatggcctggtgcgccgcgcgcagccgcctcctccccctcgccaccgcgccgcagctgctccgccgcctcctcctctcctccgctgcggccccgcgctacgcgcacccccaccaccaccacagcaacagccgccgccgccgccgccccctcgcccccaccgtctacgccgctgccgcggcagccgcagccgaggcgccgctccccatgccgccgcgcatcggccgcgccacgcggcaccccgggggcgccgcctccgtggcgcgcgtctacgccgacgccaactcccagcggcccaaggagtactgggactacgagtcgctcgacatcgaatgggggtatgtatgagccatggtggtggcgggggagctgatctcgaacctccagatttgggggctagggtttgtgctctaatggggatgcactttgttgtgcgtgtgtgtagggagcaggatgggtacgaggtgctgcgcaagcttgggagggggaagtacagcgaggtgttcgagggattccggcccgggggtgacgagaggtgcgttattaagatcctcaagcccgtcaagaagaaaaaggtaggctttgccctcatcaaaatgtagtatgcctctgcggtggaactttcaattgtatggtccaaatttagcttccccacagatgtctcagtaatatttgtcatttctgttagacttacattgcctgcttgaggaatctagggtacacatgagcattaggaaatgcagtttaggctgattcctcagctggtcgtaggagtttgggatgatgtggctccatgagtgttattttgccttgtgtgataaacaaaatcagtagaaaaacttgtcactttcaaatcttatcgatgttaagtcttattagaggaaagtgtagttcaatgaggtaggtgttatgttttttgcttggttgcatagtgttctcgttgcatcttttactatagttcatgtgtattcttagcaatccttactgaattcttttatgatgatgcagataaagagggaaataaagatacttcaaaacttatatggcggaccgaatattgtaaagctacttgatgttgtcagggatgatgaatcgaagacacctagtttgatctttgaatatgtcaacaatactgatttcaaagtactctacccaacactattggattacgatatcagatactacatttacgaattattaaaggtaataatctgaattgcagaatcctatgtctgtaataatcaatgtttttatttatgctatcttgtctatggaacatttctttgtactgatggtattttgagaattttacatgcttggttctaatttctaagaatgtatcatatcattaggagtttggtaccaacttgtcagatataatccactgcttatgtatttttcttcaaacatcacaatggatcgtaggaggttacggagtaaaataatgggactgaaatctatgctcatgtatactgtatgctgataaataattaatttaaattgtcatggtagtttttattcctagatacctttcctgtttaaagctcatatgcatagaaagtggtatgatggatgggtcgattgcgtcaatatgacttggacaaggtttggaagataaaacgatagtttgcctacatgacaatgatgtaacacatctgttcgggaagttggggttatgttcctatcgattgaggcgcgtgtgcaagcacccagaaagaagttttgcttaaaaaaaatgtaaaaggggaacaatcttcaatggccgtgcgagcaatcatcattaataaacctctggttgaattaatcatgacattttgaataacatgtctattggagccagccttgtaaattctagcgagttcaaattaattaaatcaatactagagaataaatagtagtaaataagattagcacggggtatctactacacaacatcaactacattacttcttaatttttcttcgaaatctattctgtagcattttctgacctgtaggttatctgtccgaccagtctctttagtaatgtaagcatgacatttggcaggcttttaccgtgatgtcttttggccaaagtttgcatcgtgtaaacttaacttgccaacgataaggacaatcacagtgcactatgcagacatttgagtctattgcaaattatctgtaatgcttcttggttctcctgttttgaaactttcaaagagagtgaacatactaccgtttatatgtattttataactgtgatagatatcagaagagaccatatttcacatattcataagcagtgagaatgaaattagttcacttgatttattttggaagaaccataaaaggcaacagttgatgttgtcaagttttggtatttttcacatctattttgttctgtgggactacttctgccagattaaattctgcaaaccagattcccatgttctcgattaatgtgctaacgcggtttacaatcaagccctcatcctatttacatcagagatcagactaccttcattttgatggtctttaacttatccaggtgtgtctgtaggcactagattattgtcattcacgaggcatcatgcatcgagatgtcaaacctcacaatatcatgattgatcatgagaaacgccagctttgtcttattgattggggtctagcagagttctatcatcccaagatggaatataatgctagagttgcttcaaggttagtctcccttgcattggaagttcaatgtttcagacttgttcagcttattaagaaggaacttcacttgcatgcctaaccctctgagatccttttatgttggatctgtatttgaggaaatttcaagatctcttttccataactcaatggaaagggtcatgcagggagtgagattcacttcattgtatggtaccattcacatatagttataggataatttcatttacagcaagctttcttaataatttcattattccccactcaagctgatccagtcggttgctattctatagtatcttctgtaaatttcccatccttgacttactgcatgtgtgtgctctcgtgctgtgttattgacagatcttataagggccctgaacttcttgtggatttgctagattatgattactcgttggatttgtggagccttggttgcatgtttgccgcaatggtaagtgcaagtttagggtcagccatttatctttgataacagaaccttattgatatacattatggtaatcttaacagatattccgagtcgaccctttctttaatggtcaggataactacgaccaattagtcaaaattaccgaggtatgtctgtccgtagcttcttaaacttctaagtatttctggcagctttcttgtgttgatttatgcttgacttgtgctttgggacatgtttagctagggttatctttaaatttagtaagattttctgttatagctctaacagaaatgctttagctacctactgaattgaagtaggaactttttctatttggtaactgtgaccaaaccactacgtatacagatgtttacctgccttgtgcaaagaagcaaggcttcgcagtgcatttctcagaactgaagcagctactgattacaaaaaaatgtttattgtgaatgatatatgcaatatgtcattatcgtaggttcttggaacagaagatttctacaattaccttgaaaagtatggtcttgagcttgacccgcagcttgaaagacttgttggaaggtcatgcattactttggataatcttaaatatacatcattctcataacttagcatgatctaactgaatattatttgctgcagacataataggaagccatggtcaatgtttgttaactcggggaacagacacctagcaagccctgaggtgatttgcgttgcctttcaatcaacctactggcttagtcatctcttatttgatgtattttgacatgtttctacctatataggctattgattttgtagacaggttgcttcgctacgatcaccaggaaaggcctacagcaaaggaagccatggtgacaatccctctcctactttatagaagcatatgccatagaaatcctaaatatatgtgctctaaatgcatatatttgctgtgtgcaggctcatccatatttcaatccagtgagaagcacttaaaacggcaggaagagtgcccaatagtggtatgcggcatatttgacaatttttgctacggtgtcaaatatatagagggaatttaattttcaaggctgtatggtttatccagaataaatccttgaccaacatgtaaccgtcacatcatttgtgtgaattaattcattcctctctgctaacttgttttatgatcagtttttatcaataataattcatctctgcactttcatcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0763000, RefSeq:Os03g0763000