Os03g0762900

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Revision as of 13:00, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0762900| Description = Protein of unknown function DUF566 family protein| Version = NM_001057898.1 GI:115455524 GeneID:4334205| Length = 43...")
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Gene Name

Os03g0762900

Description

Protein of unknown function DUF566 family protein

Version

NM_001057898.1 GI:115455524 GeneID:4334205

Length

4389 bp

Definition

Oryza sativa Japonica Group Os03g0762900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32404617..32409005

Sequence Coding Region

32404769..32406112,32406855..32406974,32407504..32407620,32407718..32407807,32408382..32408489
,32408584..32408652

Expression

GEO Profiles:Os03g0762900

Genome Context

<gbrowseImage1> name=NC_008396:32404617..32409005 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32404617..32409005 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcgccgccggcgcagcggcggccgcggcggccgcgcccagggtgaacccgtcgccgtccccgcaccgccgccgcgcctcctccgcgctctccccgtccaaatccgccaactccaacgccaacgccaatgccgacgccgccaggggcggcggcggcggcggcgggaagcccaagggtaaggccgtcccctcccgctacctcctcgccccctcctccaaatccacctccacctcctcctcctccaccaccaccaccaactcgtcggcgacctccaactccacctccacctcggcctccacgccctcccgccgcttcgcgtcgccgctcccgaggcggtcctcctccgtcgaccgcccgcgccccacgagcaatgcggctgctgctggtggtgacgccttggggcccaatggcgctaccaccaccaccacgaggagcctctctgttgcttttcagggccgcgcctacttcctggagaccagcaaggcgaagccggccacctccccttcgccggtgcggcggccggtggcggcggcgtccaccacgcccgagaggaggcggcccagtatgggcacagtgccggagagggggaaggtgtttgaaggtggtcatagccagcagaggtggccaatgtcggcgagggctgcccatgggttcgaggggaatccgcttaccaagagcttggactgttctctggacaagaggggtgctgctgtgctggctgctgtgcgctcactgcggcagtcaatggtgttcgaggagggggtgcggcgcgcctcgtttgatagcggtgactacttgatgtcatcggacacagagagtgtgtcatcagggagcaattctgggtctcaggatgcaggcatgggcagagcacgctcgtccccaaaggggatgagtgtgcctgcgcggttcttgcaggatgctgcggccagcaggccgaatcgccttgcagatccaagcacaccattcatgacacatagctctgggtttgcatcatctcccaggacagcaccagtcaagaaatcgttgctgaatggctttgtttcgtctccactgaataggccaattaggcagccttcaccaagtaagcttgtaggatcacggaggatgtcaagcccatcccaaccaaggggctctgtgggggtgagtgcatcatatggagatcagcatggaagaagttcatctggttatgggttggatagtcaagtgaaaaggaggtggcttgggtgtagtaaggttgactgtgagcacctattgaggattttatgcaatcgacatttgcagtggcggtgtgtaaatgcacaggctgatgctgcacttgccgcgcagaagatgactgcagagaaatacttaagtgatgcatggattactaccttaggaatgcgtaaatctgttgctcttaaaaggtttcagctacaactattccggaacaattggaaactcatgacagttctaaagggacaaatggactttctggaggagtggtcttttttagagagggatcatgcaaattctttatctgggattgtggaagctctaacggccaccattctttgccttcctgttactgatggagcaaaggctgatatccaagatgtcaaaaacgctgttggctctgcagttgacatcatgcagacaataggaagttcaatatgtactttgctcgctaagctatctgggacaagtattttggtttctgacctcgcaaaaatcgctacacaagagcgcactttaatggaccaatccagagaattgctgtccacacttgcatcaatgcacgtcaaatactgtagcctacaagggcaaagagtacagacgacaactcacaggaggcgtgtgcgttcgtag</cdnaseq>

Protein Sequence

<aaseq>MVAAGAAAAAAAAPRVNPSPSPHRRRASSALSPSKSANSNANAN ADAARGGGGGGGKPKGKAVPSRYLLAPSSKSTSTSSSSTTTTNSSATSNSTSTSASTP SRRFASPLPRRSSSVDRPRPTSNAAAAGGDALGPNGATTTTTRSLSVAFQGRAYFLET SKAKPATSPSPVRRPVAAASTTPERRRPSMGTVPERGKVFEGGHSQQRWPMSARAAHG FEGNPLTKSLDCSLDKRGAAVLAAVRSLRQSMVFEEGVRRASFDSGDYLMSSDTESVS SGSNSGSQDAGMGRARSSPKGMSVPARFLQDAAASRPNRLADPSTPFMTHSSGFASSP RTAPVKKSLLNGFVSSPLNRPIRQPSPSKLVGSRRMSSPSQPRGSVGVSASYGDQHGR SSSGYGLDSQVKRRWLGCSKVDCEHLLRILCNRHLQWRCVNAQADAALAAQKMTAEKY LSDAWITTLGMRKSVALKRFQLQLFRNNWKLMTVLKGQMDFLEEWSFLERDHANSLSG IVEALTATILCLPVTDGAKADIQDVKNAVGSAVDIMQTIGSSICTLLAKLSGTSILVS DLAKIATQERTLMDQSRELLSTLASMHVKYCSLQGQRVQTTTHRRRVRS</aaseq>

Gene Sequence

<dnaseqindica>153..1496#2239..2358#2888..3004#3102..3191#3766..3873#3968..4036#ccccgtttcactccacttcactcgcactccgaaccgagtcggccgctccgctcctcctcctccactttgtccgcctcggccgctcgcttcccatctcgaaaccccaaatccccacgccaacgcgcgcggagatttcctcgagatctgccgccatggtcgccgccggcgcagcggcggccgcggcggccgcgcccagggtgaacccgtcgccgtccccgcaccgccgccgcgcctcctccgcgctctccccgtccaaatccgccaactccaacgccaacgccaatgccgacgccgccaggggcggcggcggcggcggcgggaagcccaagggtaaggccgtcccctcccgctacctcctcgccccctcctccaaatccacctccacctcctcctcctccaccaccaccaccaactcgtcggcgacctccaactccacctccacctcggcctccacgccctcccgccgcttcgcgtcgccgctcccgaggcggtcctcctccgtcgaccgcccgcgccccacgagcaatgcggctgctgctggtggtgacgccttggggcccaatggcgctaccaccaccaccacgaggagcctctctgttgcttttcagggccgcgcctacttcctggagaccagcaaggcgaagccggccacctccccttcgccggtgcggcggccggtggcggcggcgtccaccacgcccgagaggaggcggcccagtatgggcacagtgccggagagggggaaggtgtttgaaggtggtcatagccagcagaggtggccaatgtcggcgagggctgcccatgggttcgaggggaatccgcttaccaagagcttggactgttctctggacaagaggggtgctgctgtgctggctgctgtgcgctcactgcggcagtcaatggtgttcgaggagggggtgcggcgcgcctcgtttgatagcggtgactacttgatgtcatcggacacagagagtgtgtcatcagggagcaattctgggtctcaggatgcaggcatgggcagagcacgctcgtccccaaaggggatgagtgtgcctgcgcggttcttgcaggatgctgcggccagcaggccgaatcgccttgcagatccaagcacaccattcatgacacatagctctgggtttgcatcatctcccaggacagcaccagtcaagaaatcgttgctgaatggctttgtttcgtctccactgaataggccaattaggcagccttcaccaagtaagcttgtaggatcacggaggatgtcaagcccatcccaaccaaggggctctgtgggggtgagtgcatcatatggagatcagcatggaagaagttcatctggttatgggttggatagtcaagtgaaaaggaggtggcttgggtgtagtaaggttgactgtgagcacctattgaggattttatgcaatcgacatttgcagtggcggtgtgtaaatgcacaggctgatgctgcacttgccgcgcagaagatgactgcagaggtgagtttatcacatgttcactctgctatttgacaaattgatgtgaatactcaacatgctatcagcttttccattgcaatttgtgaggcggtctgttcctgtgcaagcaaaatccgtaatatatgtatctagagatttatctctatgcatgttgatgcacatttgaaaattagcacatatgcttgtggattttagactttacctcattcctgccaatctagtagtttcactgataacttgtgtaaaatacaattcattgaatccaaggagatgggtttcataccatggcttgtactagtacacaaggttgtttgctcatgcttatagtgtgtacatcatcatatttgagtaaatttaataacttcttgaccatagatacaccaagaaacgtataactgtcaatcatatgtctggtattttatcagttttgttttcaagtgaacaattgttgccatagcatggaaaataaagaacggacacaaggcttttaagttcttttaaggctttagttcaagatgtatttgaatatttaaaaattggagcttgaattttgcatttgagtcagacagtctgtctatcatctataagtggttaatcgaaggagccaagtggccatctttaatcatcactacacctagataaaaaaagaaaggtccataccggccagattatttaaggcaatgttatgttttctgccttatttattcgttttctgctaacatttcgttctttcttttttcagaaatacttaagtgatgcatggattactaccttaggaatgcgtaaatctgttgctcttaaaaggtttcagctacaactattccggaacaattggaaactcatgacagttctaaagggacaagtaagaactgtatcttgtttcttctgcaagcttgggtttactgtttttgttacagcttcacatagccaatattttcttggttaactttaatacttattatgattcctgttaattcctcccattaccttgaaatatcctgctcatttggttggcagacattgttagcaagagaattttttaccaacaggaaatagaagactctgaaattactctaggacgagctagttctattcaggattatctgaatacagatttcctttgtttgcataactgctccacgcgggccttttcttttcacataatggcctttgttcaatacattgcacatggccctttcatgtgcataactgtaaagttgaaaaggaaaaggatcagcatgtggcctctgcagtgggacagagacaatctacagtatcattctaggtcatagcttgacctggtagaactattagctttctgtaatagctttgaatttcagttctcaacactatcttgtgacagaaattctgatagaatttgatttatacagatggactttctggaggagtggtcttttttagagagggatcatgcaaattctttatctgggattgtggaagctctaacggccaccattctttgccttcctgttactgatggagcaaaggttggcaataacttgtcaactaatagctaatttactttcatgtatttctacttgccgataaaatctctgatccttctttgtactttctcacttgcaggctgatatccaagatgtcaaaaacgctgttggctctgcagttgacatcatgcagacaataggaagttcaatatgtactttgctcgctaaggtactatttgttttatatttcttttattcatttttatgcatagtgagttacttatctaccgattacatttccttatgttaatgataacattatctcgataacatatttagcaccctatagacacctttgattttttgtcatgacaaaagatgtacatgtagttctttccatggatatataagaaaatttcgaagtcatctgatctgttgaatggttggattgggcaatatcatcaagaatttatgtcgattaggctgatcctagtcaaccatactagatcagatggcttcaacaaccttgttgagcttctgatttatgaatagaaggctaggataaacgcaggtcgttttgtcttacttttgtagttgggtcaaattggaatgttacaaattcaattcatttcagagcttcatgcattgccacaaactgtccaaacgattgtgccatgcatggattcttaagaggatttaataagaacaaaattacatatagcaacttttaggcttgtggaaatatatatattctgaaggctgcagctttcttccgtttagctgagtaatctgtcactgtgcagctatctgggacaagtattttggtttctgacctcgcaaaaatcgctacacaagagcgcactttaatggaccaatccagagaattgctgtccacacttgcatcaatgcacgtaagtgatacaaccttctcggttttattcccattatgtacacaactgttagaacgattattctaatttgcccatcacgactatgatcaaacaggtcaaatactgtagcctacaagggcaaagagtacagacgacaactcacaggaggcgtgtgcgttcgtagagcagacaactcttgactcactaaccgaagagtgtaggtgcagttgcaaaatctggttggcttgctggacaccgagcgatcagactcttctgaagaagctatcgtagtctgccgatacaagttctagcgctcttttggccctttttttggttcggtaggttcttattgctgagttgagctatgccaagcctatgtagaacagattaaatgcaacttgtatatagctgtaattttaggtgagcattaggtctaactaatttaagggttctttttttgttcgttggatgaccttccgccgtcggcgccatcaaccatgtcaatgcaatgcagtatatcctctattcttctatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0762900, RefSeq:Os03g0762900