Os03g0767800

From RiceWiki
Revision as of 13:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0767800| Description = Cold acclimation WCOR413 family protein| Version = NM_001057925.1 GI:115455578 GeneID:4334237| Length = 2620 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0767800

Description

Cold acclimation WCOR413 family protein

Version

NM_001057925.1 GI:115455578 GeneID:4334237

Length

2620 bp

Definition

Oryza sativa Japonica Group Os03g0767800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32641336..32643955

Sequence Coding Region

32641466..32641665,32642683..32642790,32643187..32643257,32643350..32643603

Expression

GEO Profiles:Os03g0767800

Genome Context

<gbrowseImage1> name=NC_008396:32641336..32643955 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32641336..32643955 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaaggggttcatgtcgtacctggcgatgaagacggacgcggcgggaggggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcggaagctcgccaaccacgcgctcgtcctcggcggcggcctcgggttcggcaccaccttcctcaagtggctcgccttcttcgccgccgtgtacctcctgatattggataggacaaactggaagaccaacatgctgaccgctctcttggtcccttacattttctttacactgcctggtgggctgttctctctgttgaggggagaaattggaaaatggattgcgatcattgctgtcatccttcgtctcttctttcctcgccatttccctgattggttagagctgcctggtgctgtgatccttctcattgctgttgccccgaacctgtttgcgagcaccttccgaggcgacttagttggcatcttcatatgcctcatcattggatgctacctgcttcaagagcacatcagggcgtcaggtggattcaggaacgccttcaggaagggcaacggagtgtccaacagcattggcatcctcttgctcttcatctaccctgtctgggccctggtgctgaactttctgtag</cdnaseq>

Protein Sequence

<aaseq>MGKGFMSYLAMKTDAAGGEAAQAALIDADLQELGVAARKLANHA LVLGGGLGFGTTFLKWLAFFAAVYLLILDRTNWKTNMLTALLVPYIFFTLPGGLFSLL RGEIGKWIAIIAVILRLFFPRHFPDWLELPGAVILLIAVAPNLFASTFRGDLVGIFIC LIIGCYLLQEHIRASGGFRNAFRKGNGVSNSIGILLLFIYPVWALVLNFL</aaseq>

Gene Sequence

<dnaseqindica>131..330#1348..1455#1852..1922#2015..2268#agtcaaattttacccaatcgccagcgagagcttgctttgatttgatccgcgcgcggagaagacgaagcgagagagagagggagaggtggaggaggctagctagggttgcgagcgatctgcagcgtgggagatggggaaggggttcatgtcgtacctggcgatgaagacggacgcggcgggaggggaggcggcgcaggcggcgctgatcgacgccgacctgcaggagctgggcgtggcggcgcggaagctcgccaaccacgcgctcgtcctcggcggcggcctcgggttcggcaccaccttcctcaagtggctcgccttcttcgccgccgtgtgagtcacccaaaacaccccccctccatgtcctttgtttgttcgtttcggtgtctctttgcagaggaccaagagtgagctttggttccaaaaggggatctccgatctcgccattttttgggggctcaaaagctccttgtgttgctgatcgggacacgccgacacgggcatggaggatcgatagttggtgtgttgctagctccgttagtactgagaataaatgtacgccattttggggatatgattaattggtagtactactgttctacctgatatccgtgactgcatgagagacgcaccctgtagctggcaatatttgatttctgttcgaaaactagagatagctcagaaattttggaaatttgcgccaaattaattagggggaaattgagcaataatttgagtatgtgtgcactattttttagataatggataaaaatccggcctctatatccgcaagcagatatacacagccaaatatgtgtgcgcttatatagtgctcgattcacaagttatatctttttaacaggtgagcaggaagtcgagatacgattgtacaattacagaactatgctgtgttgagcagtttgtaggatcctacagcctaatttctgcatattaagtatttttggcattgtatgcagtgtaatgaactagtgactgtgcgctggactgtgaatttgtgatgtgatatgagtgatacgatgatattggcatactgtactttaggaagagcagataactgctgcacatggagttgtagttgtaattattaggaccgtccatggaagttgtgctttctgaatatcagaatatgcttcatatgccagtggtgctgcaccaccctcagtaaacttgatgatttcgctcagtcttcagtatttactttcaagaccatgactttagaactttctgtgtacatttaacctgagaacggtccttataaatgtcactcatcagttgtcatttgtgcatttgagtatttgactgaaccccctctgttctcttctactgcaggtacctcctgatattggataggacaaactggaagaccaacatgctgaccgctctcttggtcccttacattttctttacactgcctggtgggctgttctctctgttgaggtatatatgcaaataccctgacacgctggctgcatttcttagcccacaaaacatgaaagatgtattagtaaactgacaattggcatcatgggattaggggctgaatgataatcttggtaaacataagttttgaagaattgaggatttttttattaaaaaggttatagcttttttataagcataagatgaaagcaagttatatgctgctgaagctagtttttcatactttgcgttctggttggaggactagggatatagttgtaaatacttacaaaatagttatgttctattctgttgtattaaagtttacaacatcacatatagatatatcaaacaaattttcttatctctaggtttcaaaaaaaaaattcttatcgctaaatgcgtaaattgcaggggagaaattggaaaatggattgcgatcattgctgtcatccttcgtctcttctttcctcgccatttccctggtatcatttgatgtctactttctagaatgttgtttgatagcctgacaaaaattcacatgggtctcacaacaatgctttgtcatgttgattagattggttagagctgcctggtgctgtgatccttctcattgctgttgccccgaacctgtttgcgagcaccttccgaggcgacttagttggcatcttcatatgcctcatcattggatgctacctgcttcaagagcacatcagggcgtcaggtggattcaggaacgccttcaggaagggcaacggagtgtccaacagcattggcatcctcttgctcttcatctaccctgtctgggccctggtgctgaactttctgtaggcgccaccgcttcagcgcttctctacaccatccagctccgatcgctgttcgttcttgtgtacatgtcttgtacggtgatttggtatctggtgatctggtagtatcgttttgaggagatggataatgtatgtttggacctcctgcctcctgatgcacgttttcttggcattttcgtttgttgtagctttgctatcagcccgtgtttcgtcgttctgagtgtacaagcgtcaataaattcatctctgttgccttctgtaaatttaaagagcttttatccaagttctcttatgtgattatccccactactacttctgaacaataatgctatgcagttgtgtgaatatccaatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0767800, RefSeq:Os03g0767800