Os03g0775400

From RiceWiki
Revision as of 13:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0775400| Description = Cytokine, IL-1 related family protein| Version = NM_001057965.1 GI:115455658 GeneID:4334286| Length = 2561 bp| Defi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0775400

Description

Cytokine, IL-1 related family protein

Version

NM_001057965.1 GI:115455658 GeneID:4334286

Length

2561 bp

Definition

Oryza sativa Japonica Group Os03g0775400, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33001518..33004078

Sequence Coding Region

33001644..33004058

Expression

GEO Profiles:Os03g0775400

Genome Context

<gbrowseImage1> name=NC_008396:33001518..33004078 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33001518..33004078 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgagatgccgccgccttggagctccacgccgccgacgccgcggcggcggcgcggccggcgatggtggccgccagcgatcactacgcgcggctcctgcagctctgccagacggcggctaacccgggcgctggccgtgccatccacgcgcgcgccgtcaaggctggcctcctcgccagcgcctacctctgcaacaacctgctctcctactacggcgagaccgccggcggcgccggtgggttgcgggacgcgcgacgcctgttcgacgagatccccttggcgcggcggaacgtgttcacctggaactcgctcctgtcgatgttcgccaagtccgggcgcttggccgacgcccgcggcgtgttcgcggaaatgcctgagagggatgccgtctcctggacagtcatggtcgtcgggctcaaccgcgccggccggttcggggaggctatcaagaccctcttggacatgaccgctgatgggtttacgccgacgcagttcactctcacaaatgtgctgtcgtcgtgcgccgtgacacaggccggcgcagttgggaggaaggttcattccttcgtcgtcaagctcgggctcggtagttgcgtgccggtggcgaactcggtgctcaacatgtatggaaagtgtggggattctgagacggcgactactgtgtttgaaaggatgccggtgcggagcgtgtcaagctggaacgccatggtatctctgaacactcatctggggaggatggaccttgccgaatccttgttcgagagcatgccagaccggagcatcgtctcatggaatgccatgattgcagggtacaaccagaatgggcttgatgccaaggcactgaagttgttctcaagaatgcttcatgagtcttccatggcgccggatgaattcaccatcaccagtgtcctatcagcttgtgcaaacctcggaaatgtaaggattggaaagcaggtgcatgcatatatcttgagaactgaaatggcatacaatagccaggtcacaaatgctctcatttcaacatacgccaagtctggcagtgttgagaatgccaggagaatcatggatcagtcaatggaaaccgatctgaatgtgatatccttcactgccctcctggaaggctatgtcaagattggggatatggagagtgcaagggaaatgttcggtgttatgaataaccgagatgttgttgcctggactgcgatgattgtcggatatgagcagaatggccgcaacgatgaggctatagatctcttcagatcaatgatcacatgtggcccagaaccaaacagctatactctggctgctgttcttagtgtctgtgcaagcctggcatgccttgattacggcaagcagatccactgcagggctatcagatcattgctagagcaatctagttcagtcagcaacgccatcatcaccatgtacgccaggtcaggcagcttcccatgggccaggaggatgtttgatcaggtttgctggcgcaaggagacgatcacatggacatccatgatcgtggctctagcacagcatggccaaggagaggaagctgttggcctcttcgaagaaatgctccgcgctggcgtggaaccggatcgcattacctatgtcggcgtgttatcagcgtgctcgcatgccggttttgtcaatgaagggaagaggtactatgatcagataaagaatgagcaccagattgcaccagagatgagccattacgcctgcatggttgacctcctcgcccgcgccggcctgttctctgaagctcaggagttcatccgacgaatgcccgttgagccggacgcaatagcctggggatcactcctctcagcctgcagagtgcacaagaacgcagaattggctgagctcgcagcggagaagcttctgtcgatcgatcccaacaacagcggcgcctactccgccattgccaacgtgtattccgcctgcgggaggtggagcgacgcggcgaggatatggaaggcgaggaaggagaaggcggtgaggaaggagacggggttcagctggacgcacatccgcagcaagatccacgtcttcggcgccgacgacgtggtgcacccgcagagggacgccgtgtacgcgatggcggcgaggatgtgggaggagatcaagggggccgggttcgtgcccgacctgcagtccgtcctgcacgacgtcgacgacgagctcaaggaggagctgctgagccgccacagcgagaagctcgccatcgcgttcggcctcatcagcacgccggagaagacgacgctgcgggtcatgaagaacctgcgggtgtgcaacgactgccacgccgcgatcaaggccatctccaaggtcacggacagggagatcatcgtgcgggacgccacgaggtttcatcatttcagggatggcctctgctcgtgtaaagattactggtag</cdnaseq>

Protein Sequence

<aaseq>MRDAAALELHAADAAAAARPAMVAASDHYARLLQLCQTAANPGA GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWN SLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETA TTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGL DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYG KQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVAL AQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA PEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAA EKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIH VFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKL AIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLC SCKDYW</aaseq>

Gene Sequence

<dnaseqindica>21..2435#atccgcaccggcacggcggcatgcgagatgccgccgccttggagctccacgccgccgacgccgcggcggcggcgcggccggcgatggtggccgccagcgatcactacgcgcggctcctgcagctctgccagacggcggctaacccgggcgctggccgtgccatccacgcgcgcgccgtcaaggctggcctcctcgccagcgcctacctctgcaacaacctgctctcctactacggcgagaccgccggcggcgccggtgggttgcgggacgcgcgacgcctgttcgacgagatccccttggcgcggcggaacgtgttcacctggaactcgctcctgtcgatgttcgccaagtccgggcgcttggccgacgcccgcggcgtgttcgcggaaatgcctgagagggatgccgtctcctggacagtcatggtcgtcgggctcaaccgcgccggccggttcggggaggctatcaagaccctcttggacatgaccgctgatgggtttacgccgacgcagttcactctcacaaatgtgctgtcgtcgtgcgccgtgacacaggccggcgcagttgggaggaaggttcattccttcgtcgtcaagctcgggctcggtagttgcgtgccggtggcgaactcggtgctcaacatgtatggaaagtgtggggattctgagacggcgactactgtgtttgaaaggatgccggtgcggagcgtgtcaagctggaacgccatggtatctctgaacactcatctggggaggatggaccttgccgaatccttgttcgagagcatgccagaccggagcatcgtctcatggaatgccatgattgcagggtacaaccagaatgggcttgatgccaaggcactgaagttgttctcaagaatgcttcatgagtcttccatggcgccggatgaattcaccatcaccagtgtcctatcagcttgtgcaaacctcggaaatgtaaggattggaaagcaggtgcatgcatatatcttgagaactgaaatggcatacaatagccaggtcacaaatgctctcatttcaacatacgccaagtctggcagtgttgagaatgccaggagaatcatggatcagtcaatggaaaccgatctgaatgtgatatccttcactgccctcctggaaggctatgtcaagattggggatatggagagtgcaagggaaatgttcggtgttatgaataaccgagatgttgttgcctggactgcgatgattgtcggatatgagcagaatggccgcaacgatgaggctatagatctcttcagatcaatgatcacatgtggcccagaaccaaacagctatactctggctgctgttcttagtgtctgtgcaagcctggcatgccttgattacggcaagcagatccactgcagggctatcagatcattgctagagcaatctagttcagtcagcaacgccatcatcaccatgtacgccaggtcaggcagcttcccatgggccaggaggatgtttgatcaggtttgctggcgcaaggagacgatcacatggacatccatgatcgtggctctagcacagcatggccaaggagaggaagctgttggcctcttcgaagaaatgctccgcgctggcgtggaaccggatcgcattacctatgtcggcgtgttatcagcgtgctcgcatgccggttttgtcaatgaagggaagaggtactatgatcagataaagaatgagcaccagattgcaccagagatgagccattacgcctgcatggttgacctcctcgcccgcgccggcctgttctctgaagctcaggagttcatccgacgaatgcccgttgagccggacgcaatagcctggggatcactcctctcagcctgcagagtgcacaagaacgcagaattggctgagctcgcagcggagaagcttctgtcgatcgatcccaacaacagcggcgcctactccgccattgccaacgtgtattccgcctgcgggaggtggagcgacgcggcgaggatatggaaggcgaggaaggagaaggcggtgaggaaggagacggggttcagctggacgcacatccgcagcaagatccacgtcttcggcgccgacgacgtggtgcacccgcagagggacgccgtgtacgcgatggcggcgaggatgtgggaggagatcaagggggccgggttcgtgcccgacctgcagtccgtcctgcacgacgtcgacgacgagctcaaggaggagctgctgagccgccacagcgagaagctcgccatcgcgttcggcctcatcagcacgccggagaagacgacgctgcgggtcatgaagaacctgcgggtgtgcaacgactgccacgccgcgatcaaggccatctccaaggtcacggacagggagatcatcgtgcgggacgccacgaggtttcatcatttcagggatggcctctgctcgtgtaaagattactggtaggaaaacgttcatggtgattttggcgaggaagggggatatttgtttgttgtttcatgcagagatgtactccattgtaagcttgcaagaacagccaattccaatattcatgaatcacatgattaaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0775400, RefSeq:Os03g0775400

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0775400&oldid=20605"